RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 M0R3E3 92 aa13.19□□□□□ -0.3
PDLIM7-216ENST00000506537 OR7C2O60412 319 aa13.19□□□□□ -0.3
PDLIM7-216ENST00000506537 NBEAP1P0C6P0 100 aa13.19□□□□□ -0.3
PDLIM7-216ENST00000506537 RBMY1A1P0DJD3 496 aaKnown RBP13.19□□□□□ -0.3
PDLIM7-216ENST00000506537 RBMY1CP0DJD4 496 aa13.19□□□□□ -0.3
PDLIM7-216ENST00000506537 RBMY1FQ15415 496 aaKnown RBP13.19□□□□□ -0.3
PDLIM7-216ENST00000506537 SPINK13Q1W4C9 94 aa13.19□□□□□ -0.3
PDLIM7-216ENST00000506537 Q6ZNX1 250 aa13.19□□□□□ -0.3
PDLIM7-216ENST00000506537 EXOC3-AS1Q8N2X6 119 aa13.19□□□□□ -0.3
PDLIM7-216ENST00000506537 RNF141Q8WVD5 230 aa13.19□□□□□ -0.3
PDLIM7-216ENST00000506537 PHYHIPLQ96FC7 376 aa13.19□□□□□ -0.3
PDLIM7-216ENST00000506537 BOLA2-SMG1P6H3BVE0 249 aa13.18□□□□□ -0.3
PDLIM7-216ENST00000506537 CRXO43186 299 aaPredicted RBP13.18□□□□□ -0.3
PDLIM7-216ENST00000506537 MIFP14174 115 aa13.18□□□□□ -0.3
PDLIM7-216ENST00000506537 KHDC3LQ587J8 217 aa13.18□□□□□ -0.3
PDLIM7-216ENST00000506537 FAM122CQ6P4D5 195 aa13.18□□□□□ -0.3
PDLIM7-216ENST00000506537 C1orf158Q8N1D5 194 aa13.18□□□□□ -0.3
PDLIM7-216ENST00000506537 MRPL53Q96EL3 112 aaKnown RBP13.18□□□□□ -0.3
PDLIM7-216ENST00000506537 UBE2L3P68036 154 aaKnown RBP13.17□□□□□ -0.3
PDLIM7-216ENST00000506537 BAP18Q8IXM2 172 aa13.17□□□□□ -0.3
PDLIM7-216ENST00000506537 OR10G4Q8NGN3 311 aa13.17□□□□□ -0.3
PDLIM7-216ENST00000506537 OR10G9Q8NGN4 311 aa13.17□□□□□ -0.3
PDLIM7-216ENST00000506537 OR10G7Q8NGN6 311 aa13.17□□□□□ -0.3
PDLIM7-216ENST00000506537 CYTL1Q9NRR1 136 aa13.17□□□□□ -0.3
PDLIM7-216ENST00000506537 IGHV3OR16-12A0A075B7B8 117 aa13.16□□□□□ -0.3
PDLIM7-216ENST00000506537 BORCS7-ASMTA0A0B4J1R7 106 aa13.16□□□□□ -0.3
PDLIM7-216ENST00000506537 TAS2R45P59539 299 aa13.16□□□□□ -0.3
PDLIM7-216ENST00000506537 RPP25LQ8N5L8 163 aaKnown RBP13.16□□□□□ -0.3
PDLIM7-216ENST00000506537 ST6GAL2Q96JF0 529 aa13.16□□□□□ -0.3
PDLIM7-216ENST00000506537 IGF2BP2-AS1Q96M15 143 aa13.16□□□□□ -0.3
PDLIM7-216ENST00000506537 TRAV12-2A0A075B6T6 113 aa13.15□□□□□ -0.3
PDLIM7-216ENST00000506537 NPIPB6E9PJ23 425 aa13.15□□□□□ -0.3
PDLIM7-216ENST00000506537 HMGB3O15347 200 aaKnown RBP13.15□□□□□ -0.3
PDLIM7-216ENST00000506537 AMBPP02760 352 aa13.15□□□□□ -0.3
PDLIM7-216ENST00000506537 SERF2P84101 59 aa13.15□□□□□ -0.3
PDLIM7-216ENST00000506537 PMS2P11Q13670 270 aa13.15□□□□□ -0.3
PDLIM7-216ENST00000506537 ZNF345Q14585 488 aa13.15□□□□□ -0.3
PDLIM7-216ENST00000506537 ICAM4Q14773 271 aa13.15□□□□□ -0.3
PDLIM7-216ENST00000506537 KCNRGQ8N5I3 272 aa13.15□□□□□ -0.3
PDLIM7-216ENST00000506537 OR10J6PQ8NGY7 276 aa13.15□□□□□ -0.3
PDLIM7-216ENST00000506537 NEU1Q99519 415 aa13.15□□□□□ -0.3
PDLIM7-216ENST00000506537 PRELID1Q9Y255 219 aa13.15□□□□□ -0.3
PDLIM7-216ENST00000506537 SACSQ9NZJ4 4579 aa13.14□□□□□ -0.31
PDLIM7-216ENST00000506537 A0A1W2PPV4 95 aa13.14□□□□□ -0.31
PDLIM7-216ENST00000506537 HMSDA8MTL9 139 aa13.14□□□□□ -0.31
PDLIM7-216ENST00000506537 INSP01308 110 aa13.14□□□□□ -0.31
PDLIM7-216ENST00000506537 CT45A10P0DMU9 189 aa13.14□□□□□ -0.31
PDLIM7-216ENST00000506537 CDC34P49427 236 aaPredicted RBP13.14□□□□□ -0.31
PDLIM7-216ENST00000506537 KIR3DS1Q14943 382 aa13.14□□□□□ -0.31
PDLIM7-216ENST00000506537 GNPNAT1Q96EK6 184 aaPredicted RBP13.14□□□□□ -0.31
PDLIM7-216ENST00000506537 AAMDCQ9H7C9 122 aa13.14□□□□□ -0.31
PDLIM7-216ENST00000506537 GOLT1BQ9Y3E0 138 aa13.14□□□□□ -0.31
PDLIM7-216ENST00000506537 TAAR5O14804 337 aa13.13□□□□□ -0.31
PDLIM7-216ENST00000506537 NANOS2P60321 138 aaKnown RBP13.13□□□□□ -0.31
PDLIM7-216ENST00000506537 ERCC8Q13216 396 aa13.13□□□□□ -0.31
PDLIM7-216ENST00000506537 SSX7Q7RTT5 188 aa13.13□□□□□ -0.31
PDLIM7-216ENST00000506537 PPP1R14DQ9NXH3 145 aa13.13□□□□□ -0.31
PDLIM7-216ENST00000506537 IGKV2-40A0A087WW87 121 aaPredicted RBP13.12□□□□□ -0.31
PDLIM7-216ENST00000506537 CXorf65A6NEN9 183 aa13.12□□□□□ -0.31
PDLIM7-216ENST00000506537 JTBO76095 146 aa13.12□□□□□ -0.31
PDLIM7-216ENST00000506537 IGKV2D-40P01614 121 aaPredicted RBP13.12□□□□□ -0.31
PDLIM7-216ENST00000506537 MBP02144 154 aa13.12□□□□□ -0.31
PDLIM7-216ENST00000506537 STAG3L2P0CL84 134 aa13.12□□□□□ -0.31
PDLIM7-216ENST00000506537 STAG3L3P0CL85 134 aa13.12□□□□□ -0.31
PDLIM7-216ENST00000506537 ARL14EPLP0DKL9 152 aa13.12□□□□□ -0.31
PDLIM7-216ENST00000506537 CDKN1BP46527 198 aa13.12□□□□□ -0.31
PDLIM7-216ENST00000506537 RANP62826 216 aaKnown RBP13.12□□□□□ -0.31
PDLIM7-216ENST00000506537 PQLC2Q6ZP29 291 aa13.12□□□□□ -0.31
PDLIM7-216ENST00000506537 C11orf45Q8TAV5 145 aa13.12□□□□□ -0.31
PDLIM7-216ENST00000506537 RAB24Q969Q5 203 aa13.12□□□□□ -0.31
PDLIM7-216ENST00000506537 Q9H3A6 140 aa13.12□□□□□ -0.31
PDLIM7-216ENST00000506537 CELA1Q9UNI1 258 aa13.12□□□□□ -0.31
PDLIM7-216ENST00000506537 ALMS1Q8TCU4 4167 aa13.11□□□□□ -0.31
PDLIM7-216ENST00000506537 PRM2P04554 102 aa13.11□□□□□ -0.31
PDLIM7-216ENST00000506537 ODF3Q96PU9 254 aa13.11□□□□□ -0.31
PDLIM7-216ENST00000506537 ARPC5LQ9BPX5 153 aa13.11□□□□□ -0.31
PDLIM7-216ENST00000506537 DNAH1Q9P2D7 4330 aa13.1□□□□□ -0.31
PDLIM7-216ENST00000506537 hCG_2014768A0A024R1R8 64 aa13.1□□□□□ -0.31
PDLIM7-216ENST00000506537 SMIM9A6NGZ8 99 aa13.1□□□□□ -0.31
PDLIM7-216ENST00000506537 ZNF726P1Q15940 193 aa13.1□□□□□ -0.31
PDLIM7-216ENST00000506537 TCTE3Q8IZS6 198 aa13.1□□□□□ -0.31
PDLIM7-216ENST00000506537 LYPD1Q8N2G4 141 aa13.1□□□□□ -0.31
PDLIM7-216ENST00000506537 AGPAT4-IT1Q9H0P7 198 aa13.1□□□□□ -0.31
PDLIM7-216ENST00000506537 BCL2L11O43521 198 aa13.09□□□□□ -0.31
PDLIM7-216ENST00000506537 GFI1BQ5VTD9 330 aa13.09□□□□□ -0.31
PDLIM7-216ENST00000506537 C9orf47Q6ZRZ4 202 aa13.09□□□□□ -0.31
PDLIM7-216ENST00000506537 FAM19A4Q96LR4 140 aa13.09□□□□□ -0.31
PDLIM7-216ENST00000506537 VGLL1Q99990 258 aa13.09□□□□□ -0.31
PDLIM7-216ENST00000506537 TMEM208Q9BTX3 173 aa13.09□□□□□ -0.31
PDLIM7-216ENST00000506537 ACTR3CQ9C0K3 210 aaPredicted RBP13.09□□□□□ -0.31
PDLIM7-216ENST00000506537 RYR2Q92736 4967 aa13.09□□□□□ -0.31
PDLIM7-216ENST00000506537 A0A0D9SG52 128 aa13.08□□□□□ -0.32
PDLIM7-216ENST00000506537 ZNF705GA8MUZ8 300 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-216ENST00000506537 HBE1P02100 147 aa13.08□□□□□ -0.32
PDLIM7-216ENST00000506537 GCHFRP30047 84 aa13.08□□□□□ -0.32
PDLIM7-216ENST00000506537 TSPOP30536 169 aa13.08□□□□□ -0.32
PDLIM7-216ENST00000506537 SUN5Q8TC36 379 aa13.08□□□□□ -0.32
PDLIM7-216ENST00000506537 PHLDA1Q8WV24 401 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-216ENST00000506537 OTORQ9NRC9 128 aa13.08□□□□□ -0.32
PDLIM7-216ENST00000506537 LOC102723971A0A1B0GUV8 181 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms