RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 MRPL30Q8TCC3 161 aaKnown RBP3.68□□□□□ -1.82
NIPBL-205ENST00000505998 C15orf40Q8WUR7 153 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 SMIM4Q8WVI0 70 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 GALMQ96C23 342 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 DIRAS2Q96HU8 199 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 OR8B2Q96RD0 313 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 PSMG3Q9BT73 122 aaPredicted RBP3.68□□□□□ -1.82
NIPBL-205ENST00000505998 PECRQ9BY49 303 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 CHST6Q9GZX3 395 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 DAZ3Q9NR90 486 aaKnown RBP3.68□□□□□ -1.82
NIPBL-205ENST00000505998 CLN8Q9UBY8 286 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 UFC1Q9Y3C8 167 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 CSDC2Q9Y534 153 aaKnown RBP3.68□□□□□ -1.82
NIPBL-205ENST00000505998 INSIG2Q9Y5U4 225 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 TEP1Q99973 2627 aaKnown RBP3.68□□□□□ -1.82
NIPBL-205ENST00000505998 IGHV3OR15-7A0A075B7D8 119 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 IGHV3-64DA0A0J9YX35 117 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 TMEM30CPA0ZSE6 113 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 ODAMA1E959 279 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 ODF3BA8MYP8 253 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 GSTZ1O43708 216 aaPredicted RBP3.67□□□□□ -1.82
NIPBL-205ENST00000505998 ENSAO43768 121 aaKnown RBP3.67□□□□□ -1.82
NIPBL-205ENST00000505998 CD5LO43866 347 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 HIST1H2BKO60814 126 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 OR7C1O76099 320 aaPredicted RBP3.67□□□□□ -1.82
NIPBL-205ENST00000505998 OR2F2O95006 317 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 OR2A4O95047 310 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 GYPAP02724 150 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 HIST1H2BJP06899 126 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 CXCL3P19876 107 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 HIST1H2BOP23527 126 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 CDK2P24941 298 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 HIST1H2BBP33778 126 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 HIST1H2BDP58876 126 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 TAS2R20P59543 309 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 HIST1H2BCP62807 126 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 ZNF345Q14585 488 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 TNXAQ16473 311 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 HIST2H2BEQ16778 126 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 TMEM183BQ1AE95 376 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 KRTAP13-3Q3SY46 172 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 TMEM128Q5BJH2 165 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 LRRC10Q5BKY1 277 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 COA6Q5JTJ3 125 aaKnown RBP3.67□□□□□ -1.82
NIPBL-205ENST00000505998 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.67□□□□□ -1.82
NIPBL-205ENST00000505998 HCP5Q6MZN7 132 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 FA2HQ7L5A8 372 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 C6orf201Q7Z4U5 140 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 TPRX1Q8N7U7 411 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 ZNF439Q8NDP4 499 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 OR4A4PQ8NGN8 299 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 OR1N2Q8NGR9 330 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 HIST1H2BHQ93079 126 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 ARHGAP5-AS1Q96IT6 56 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 OR2A7Q96R45 310 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 CCL13Q99616 98 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 HIST1H2BNQ99877 126 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 HIST1H2BMQ99879 126 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 MAP1LC3CQ9BXW4 147 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 BANF2Q9H503 90 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 TAF9BQ9HBM6 251 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 VAX2Q9UIW0 290 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 TRAPPC2LQ9UL33 140 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 ZFHX3Q15911 3703 aa3.67□□□□□ -1.82
NIPBL-205ENST00000505998 KBTBD11-OT1A0A1B0GTJ5 212 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 KANTRA0A1W2PQU2 76 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 hADV38S2A0JD32 116 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 SMIM9A6NGZ8 99 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 GABARAPH6UMI1 98 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 SIRPB1O00241 398 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 DEGS1O15121 323 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 NDUFB3O43676 98 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 IFNA1P01562 189 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 TFF1P04155 84 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 CD74P04233 296 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 TYMSP04818 313 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 SFTA3P0C7M3 94 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 ZNF728P0DKX0 622 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 PRTN3P24158 256 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 BLVRBP30043 206 aaPredicted RBP3.66□□□□□ -1.82
NIPBL-205ENST00000505998 VDAC2P45880 294 aaPredicted RBP3.66□□□□□ -1.82
NIPBL-205ENST00000505998 RPS10P46783 165 aaKnown RBP3.66□□□□□ -1.82
NIPBL-205ENST00000505998 GABRA2P47869 451 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 TCTAP57738 103 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 TAS2R30P59541 319 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 UBE2KP61086 200 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 RPL31P62899 125 aaKnown RBP3.66□□□□□ -1.82
NIPBL-205ENST00000505998 PSG5Q15238 335 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 MSMO1Q15800 293 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 BATFQ16520 125 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 CNIH2Q6PI25 160 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 LINC00311Q8N616 119 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 OR11H6Q8NGC7 330 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 OR10G9Q8NGN4 311 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 OR9G4Q8NGQ1 327 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 S100A16Q96FQ6 103 aaKnown RBP3.66□□□□□ -1.82
NIPBL-205ENST00000505998 YPEL4Q96NS1 127 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 GPR82Q96P67 336 aa3.66□□□□□ -1.82
NIPBL-205ENST00000505998 CIB3Q96Q77 187 aaPredicted RBP3.66□□□□□ -1.82
NIPBL-205ENST00000505998 AGMATQ9BSE5 352 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms