RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 FLNBO75369 2602 aaKnown RBP11.13□□□□□ -0.63
TCOF1-207ENST00000504761 SPATA45Q537H7 98 aa11.13□□□□□ -0.63
TCOF1-207ENST00000504761 MRPL36Q9P0J6 103 aaKnown RBP11.13□□□□□ -0.63
TCOF1-207ENST00000504761 TRBV19A0A075B6N1 114 aa11.13□□□□□ -0.63
TCOF1-207ENST00000504761 TRAV9-1A0A075B6T8 112 aa11.13□□□□□ -0.63
TCOF1-207ENST00000504761 NCR2O95944 276 aa11.13□□□□□ -0.63
TCOF1-207ENST00000504761 ACTL10Q5JWF8 245 aa11.13□□□□□ -0.63
TCOF1-207ENST00000504761 LYZL1Q6UWQ5 148 aa11.13□□□□□ -0.63
TCOF1-207ENST00000504761 TRAV12-3A0A0B4J271 114 aa11.13□□□□□ -0.63
TCOF1-207ENST00000504761 PMCHL1Q16048 86 aa11.13□□□□□ -0.63
TCOF1-207ENST00000504761 C9orf139Q6ZV77 190 aa11.13□□□□□ -0.63
TCOF1-207ENST00000504761 ZNF256Q9Y2P7 627 aaPredicted RBP11.13□□□□□ -0.63
TCOF1-207ENST00000504761 IGKV1OR2-108A0A075B7D4 117 aa11.13□□□□□ -0.63
TCOF1-207ENST00000504761 OVOL1O14753 267 aa11.13□□□□□ -0.63
TCOF1-207ENST00000504761 TMEM97Q5BJF2 176 aa11.13□□□□□ -0.63
TCOF1-207ENST00000504761 FBLL1A6NHQ2 334 aaKnown RBP11.12□□□□□ -0.63
TCOF1-207ENST00000504761 SH2D1AO60880 128 aa11.12□□□□□ -0.63
TCOF1-207ENST00000504761 HIST2H2BCQ6DN03 193 aa11.12□□□□□ -0.63
TCOF1-207ENST00000504761 TMEM256Q8N2U0 113 aa11.12□□□□□ -0.63
TCOF1-207ENST00000504761 KIR2DL4Q99706 377 aa11.12□□□□□ -0.63
TCOF1-207ENST00000504761 IGKV3OR2-268A0A0C4DH90 116 aa11.12□□□□□ -0.63
TCOF1-207ENST00000504761 Q86TA4 180 aa11.12□□□□□ -0.63
TCOF1-207ENST00000504761 SOX21Q9Y651 276 aaPredicted RBP11.12□□□□□ -0.63
TCOF1-207ENST00000504761 M0R143 59 aa11.12□□□□□ -0.63
TCOF1-207ENST00000504761 IGLV2-23P01705 113 aa11.12□□□□□ -0.63
TCOF1-207ENST00000504761 C7orf71A4D174 169 aa11.11□□□□□ -0.63
TCOF1-207ENST00000504761 LMO4P61968 165 aa11.11□□□□□ -0.63
TCOF1-207ENST00000504761 ST6GALNAC6Q969X2 333 aa11.11□□□□□ -0.63
TCOF1-207ENST00000504761 IGKV1-17P01599 117 aa11.11□□□□□ -0.63
TCOF1-207ENST00000504761 HLA-DMBP28068 263 aa11.11□□□□□ -0.63
TCOF1-207ENST00000504761 GNB1LQ9BYB4 327 aa11.11□□□□□ -0.63
TCOF1-207ENST00000504761 NRN1Q9NPD7 142 aa11.11□□□□□ -0.63
TCOF1-207ENST00000504761 DOPEY1Q5JWR5 2465 aa11.11□□□□□ -0.63
TCOF1-207ENST00000504761 VCANP13611 3396 aa11.11□□□□□ -0.63
TCOF1-207ENST00000504761 Q8N9W7 124 aa11.11□□□□□ -0.63
TCOF1-207ENST00000504761 THAP8Q8NA92 274 aa11.11□□□□□ -0.63
TCOF1-207ENST00000504761 FXYD5Q96DB9 178 aa11.11□□□□□ -0.63
TCOF1-207ENST00000504761 K7EIM0 57 aa11.11□□□□□ -0.63
TCOF1-207ENST00000504761 Q1RN00 199 aa11.11□□□□□ -0.63
TCOF1-207ENST00000504761 VWC2Q2TAL6 325 aa11.11□□□□□ -0.63
TCOF1-207ENST00000504761 LYPD1Q8N2G4 141 aa11.11□□□□□ -0.63
TCOF1-207ENST00000504761 COL5A1P20908 1838 aaPredicted RBP11.11□□□□□ -0.63
TCOF1-207ENST00000504761 TTC9CQ8N5M4 171 aa11.1□□□□□ -0.63
TCOF1-207ENST00000504761 PAX1P15863 534 aa11.1□□□□□ -0.63
TCOF1-207ENST00000504761 C8orf49Q96NF6 230 aa11.1□□□□□ -0.63
TCOF1-207ENST00000504761 TMEM70Q9BUB7 260 aa11.1□□□□□ -0.63
TCOF1-207ENST00000504761 MGAQ8IWI9 3026 aa11.1□□□□□ -0.63
TCOF1-207ENST00000504761 VPS13AQ96RL7 3174 aa11.1□□□□□ -0.63
TCOF1-207ENST00000504761 FAM181BA6NEQ2 426 aa11.1□□□□□ -0.63
TCOF1-207ENST00000504761 NPIPB6E9PJ23 425 aa11.1□□□□□ -0.63
TCOF1-207ENST00000504761 A0A1B0GUS0 222 aa11.09□□□□□ -0.63
TCOF1-207ENST00000504761 SNAI2O43623 268 aa11.09□□□□□ -0.63
TCOF1-207ENST00000504761 DUSP14O95147 198 aaKnown RBP11.09□□□□□ -0.63
TCOF1-207ENST00000504761 FAM209BQ5JX69 171 aa11.09□□□□□ -0.63
TCOF1-207ENST00000504761 J3QLI3 93 aa11.09□□□□□ -0.63
TCOF1-207ENST00000504761 SRSF9Q13242 221 aaKnown RBP eCLIP11.09□□□□□ -0.63
TCOF1-207ENST00000504761 SAMD13Q5VXD3 122 aa11.09□□□□□ -0.63
TCOF1-207ENST00000504761 AMMECR1LQ6DCA0 310 aa11.09□□□□□ -0.63
TCOF1-207ENST00000504761 HIST1H2BLQ99880 126 aa11.09□□□□□ -0.63
TCOF1-207ENST00000504761 PFN1P07737 140 aaKnown RBP11.09□□□□□ -0.63
TCOF1-207ENST00000504761 DEFB131AP59861 70 aa11.09□□□□□ -0.63
TCOF1-207ENST00000504761 C14orf144Q96I85 54 aa11.09□□□□□ -0.63
TCOF1-207ENST00000504761 HCFC1P51610 2035 aa11.09□□□□□ -0.63
TCOF1-207ENST00000504761 PDE6HQ13956 83 aa11.09□□□□□ -0.63
TCOF1-207ENST00000504761 LYPD6BQ8NI32 183 aa11.09□□□□□ -0.63
TCOF1-207ENST00000504761 SPOCK3Q9BQ16 436 aa11.09□□□□□ -0.63
TCOF1-207ENST00000504761 TRGV2A0A075B6R0 118 aa11.08□□□□□ -0.64
TCOF1-207ENST00000504761 H3BRN7 92 aa11.08□□□□□ -0.64
TCOF1-207ENST00000504761 DEFB136Q30KP8 78 aa11.08□□□□□ -0.64
TCOF1-207ENST00000504761 PATE2Q6UY27 113 aa11.08□□□□□ -0.64
TCOF1-207ENST00000504761 DYNAPQ8N1N2 210 aa11.08□□□□□ -0.64
TCOF1-207ENST00000504761 OR11H1Q8NG94 326 aa11.08□□□□□ -0.64
TCOF1-207ENST00000504761 UBE2E2Q96LR5 201 aa11.08□□□□□ -0.64
TCOF1-207ENST00000504761 TMEM160Q9NX00 188 aa11.08□□□□□ -0.64
TCOF1-207ENST00000504761 LY96Q9Y6Y9 160 aa11.08□□□□□ -0.64
TCOF1-207ENST00000504761 C5orf52A6NGY3 159 aa11.08□□□□□ -0.64
TCOF1-207ENST00000504761 HERVK_113P61574 105 aa11.08□□□□□ -0.64
TCOF1-207ENST00000504761 C8orf86Q6ZUL3 223 aa11.08□□□□□ -0.64
TCOF1-207ENST00000504761 SIRPDQ9H106 197 aa11.08□□□□□ -0.64
TCOF1-207ENST00000504761 I3L2K1 104 aa11.08□□□□□ -0.64
TCOF1-207ENST00000504761 HINT1P49773 126 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-207ENST00000504761 BCL6BQ8N143 479 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-207ENST00000504761 EXPH5Q8NEV8 1989 aa11.08□□□□□ -0.64
TCOF1-207ENST00000504761 ARMS2P0C7Q2 107 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 LINC00614P0C842 121 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 HTN3P15516 51 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 ZNF414Q96IQ9 312 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 TNFRSF18Q9Y5U5 241 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 CENPEQ02224 2701 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 A0A1B0GW15 77 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 TEX22C9J3V5 150 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 P0C879 139 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 NIT1Q86X76 327 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 ZNF295-AS1Q8N0V1 137 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 KMT2EQ8IZD2 1858 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 IGHV3-73A0A0B4J1V6 119 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 D6R8Y8 96 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 ZNF25P17030 456 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-207ENST00000504761 DDTP30046 118 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 NPBQ8NG41 125 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms