RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 MIR7-3HGQ8N6C7 128 aa3.46□□□□□ -1.86
NIPBL-204ENST00000504430 PSMF1Q92530 271 aa3.46□□□□□ -1.86
NIPBL-204ENST00000504430 DPH3P1Q9H4G8 78 aa3.46□□□□□ -1.86
NIPBL-204ENST00000504430 ABCA3Q99758 1704 aa3.45□□□□□ -1.86
NIPBL-204ENST00000504430 LCTP09848 1927 aa3.45□□□□□ -1.86
NIPBL-204ENST00000504430 IGKV2D-26A0A0A0MRZ7 120 aa3.45□□□□□ -1.86
NIPBL-204ENST00000504430 IGHV3-64DA0A0J9YX35 117 aa3.45□□□□□ -1.86
NIPBL-204ENST00000504430 NDUFB2O95178 105 aa3.45□□□□□ -1.86
NIPBL-204ENST00000504430 MRPS21P82921 87 aaKnown RBP3.45□□□□□ -1.86
NIPBL-204ENST00000504430 TRGV5A0A0B4J1U4 118 aa3.45□□□□□ -1.86
NIPBL-204ENST00000504430 A0A1W2PP18 115 aa3.45□□□□□ -1.86
NIPBL-204ENST00000504430 PDCD5O14737 125 aa3.45□□□□□ -1.86
NIPBL-204ENST00000504430 PFN4Q8NHR9 129 aa3.45□□□□□ -1.86
NIPBL-204ENST00000504430 LINC01560Q8TB33 94 aa3.45□□□□□ -1.86
NIPBL-204ENST00000504430 MRPS24Q96EL2 167 aaKnown RBP3.45□□□□□ -1.86
NIPBL-204ENST00000504430 RBBP6Q7Z6E9 1792 aaKnown RBP3.45□□□□□ -1.86
NIPBL-204ENST00000504430 ABCC5O15440 1437 aa3.45□□□□□ -1.86
NIPBL-204ENST00000504430 NOVP48745 357 aa3.45□□□□□ -1.86
NIPBL-204ENST00000504430 SDIM1Q6ZPB5 146 aa3.45□□□□□ -1.86
NIPBL-204ENST00000504430 C10orf82Q8WW14 230 aa3.45□□□□□ -1.86
NIPBL-204ENST00000504430 BRWD3Q6RI45 1802 aa3.45□□□□□ -1.86
NIPBL-204ENST00000504430 NUMA1Q14980 2115 aa3.44□□□□□ -1.86
NIPBL-204ENST00000504430 A0A1W2PQD3 144 aa3.44□□□□□ -1.86
NIPBL-204ENST00000504430 SPRNQ5BIV9 151 aa3.44□□□□□ -1.86
NIPBL-204ENST00000504430 POP5Q969H6 163 aaKnown RBP3.44□□□□□ -1.86
NIPBL-204ENST00000504430 CPSF4O95639 269 aaKnown RBP3.44□□□□□ -1.86
NIPBL-204ENST00000504430 RBP4P02753 201 aa3.44□□□□□ -1.86
NIPBL-204ENST00000504430 NPC2P61916 151 aa3.44□□□□□ -1.86
NIPBL-204ENST00000504430 GNGT1P63211 74 aa3.44□□□□□ -1.86
NIPBL-204ENST00000504430 IQCJQ1A5X6 159 aa3.44□□□□□ -1.86
NIPBL-204ENST00000504430 FAM216BQ8N7L0 139 aa3.44□□□□□ -1.86
NIPBL-204ENST00000504430 CLIP1P30622 1438 aa3.44□□□□□ -1.86
NIPBL-204ENST00000504430 HINT1P49773 126 aaPredicted RBP3.43□□□□□ -1.86
NIPBL-204ENST00000504430 HIST1H4AP62805 103 aaKnown RBP3.43□□□□□ -1.86
NIPBL-204ENST00000504430 Q0VG73 95 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 IL17AQ16552 155 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 HMGN2P46Q86SG4 172 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 Q8NDZ9 215 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 TNFRSF19Q9NS68 423 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 TMEM242Q9NWH2 141 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 LINC00474Q9P2X8 69 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 TPRKBQ9Y3C4 175 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 ERVK-7P63135 1459 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 hADV29S1A0JD25 119 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 FAM168BA1KXE4 195 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 K7EP34 96 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 GNRH2O43555 120 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 IGLV1-51P01701 117 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 GYPBP06028 91 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 FXYD7P58549 80 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 SMCR5Q8TEV8 140 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 AMELYQ99218 206 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 RPP21Q9H633 154 aaKnown RBP3.43□□□□□ -1.86
NIPBL-204ENST00000504430 PTPRBP23467 1997 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 ADGRB1O14514 1584 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 ZNF705BP0CI00 300 aaPredicted RBP3.43□□□□□ -1.86
NIPBL-204ENST00000504430 CRIP2P52943 208 aaPredicted RBP3.43□□□□□ -1.86
NIPBL-204ENST00000504430 CFTRP13569 1480 aa3.43□□□□□ -1.86
NIPBL-204ENST00000504430 FAM19A2Q8N3H0 131 aa3.42□□□□□ -1.86
NIPBL-204ENST00000504430 CYSTM1Q9H1C7 97 aa3.42□□□□□ -1.86
NIPBL-204ENST00000504430 NINQ8N4C6 2090 aa3.42□□□□□ -1.86
NIPBL-204ENST00000504430 COX6A1P12074 109 aa3.42□□□□□ -1.86
NIPBL-204ENST00000504430 CKS2P33552 79 aa3.42□□□□□ -1.86
NIPBL-204ENST00000504430 C6orf52Q5T4I8 152 aa3.42□□□□□ -1.86
NIPBL-204ENST00000504430 C1orf134Q5TEV5 83 aa3.42□□□□□ -1.86
NIPBL-204ENST00000504430 Q8N814 137 aa3.42□□□□□ -1.86
NIPBL-204ENST00000504430 FAM213BQ8TBF2 198 aa3.42□□□□□ -1.86
NIPBL-204ENST00000504430 AP4S1Q9Y587 144 aa3.42□□□□□ -1.86
NIPBL-204ENST00000504430 MINOS1-NBL1R4GNA1 71 aa3.42□□□□□ -1.86
NIPBL-204ENST00000504430 TRPM7Q96QT4 1865 aa3.42□□□□□ -1.86
NIPBL-204ENST00000504430 SCAPERQ9BY12 1400 aa3.42□□□□□ -1.86
NIPBL-204ENST00000504430 IGHV1-3A0A0C4DH29 117 aa3.42□□□□□ -1.86
NIPBL-204ENST00000504430 EIF4EBP1Q13541 118 aaPredicted RBP3.42□□□□□ -1.86
NIPBL-204ENST00000504430 KRTAP19-4Q3LI73 84 aa3.42□□□□□ -1.86
NIPBL-204ENST00000504430 YPEL2Q96QA6 119 aa3.42□□□□□ -1.86
NIPBL-204ENST00000504430 THADAQ6YHU6 1953 aa3.42□□□□□ -1.86
NIPBL-204ENST00000504430 PCNX2A6NKB5 2137 aa3.41□□□□□ -1.86
NIPBL-204ENST00000504430 KDM6AO15550 1401 aaPredicted RBP3.41□□□□□ -1.86
NIPBL-204ENST00000504430 IGHV3-73A0A0B4J1V6 119 aa3.41□□□□□ -1.86
NIPBL-204ENST00000504430 SNCGO76070 127 aa3.41□□□□□ -1.86
NIPBL-204ENST00000504430 IL5P05113 134 aa3.41□□□□□ -1.86
NIPBL-204ENST00000504430 ZNF816Q0VGE8 651 aaPredicted RBP3.41□□□□□ -1.86
NIPBL-204ENST00000504430 GFI1BQ5VTD9 330 aa3.41□□□□□ -1.86
NIPBL-204ENST00000504430 CPSF1Q10570 1443 aaKnown RBP3.41□□□□□ -1.86
NIPBL-204ENST00000504430 CCDC141Q6ZP82 1450 aa3.41□□□□□ -1.86
NIPBL-204ENST00000504430 IGHV1-46P01743 117 aa3.41□□□□□ -1.86
NIPBL-204ENST00000504430 ADAMTS12P58397 1594 aa3.41□□□□□ -1.86
NIPBL-204ENST00000504430 EML5Q05BV3 1969 aa3.41□□□□□ -1.86
NIPBL-204ENST00000504430 NYNRINQ9P2P1 1898 aaKnown RBP3.41□□□□□ -1.86
NIPBL-204ENST00000504430 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.4□□□□□ -1.86
NIPBL-204ENST00000504430 ZNF736B4DX44 427 aaPredicted RBP3.4□□□□□ -1.86
NIPBL-204ENST00000504430 LINC00032P0C843 101 aa3.4□□□□□ -1.86
NIPBL-204ENST00000504430 CCL4P13236 92 aa3.4□□□□□ -1.86
NIPBL-204ENST00000504430 ETV6P41212 452 aa3.4□□□□□ -1.86
NIPBL-204ENST00000504430 MIAQ16674 131 aa3.4□□□□□ -1.86
NIPBL-204ENST00000504430 LINC01545Q5VT33 79 aa3.4□□□□□ -1.86
NIPBL-204ENST00000504430 LINC00479Q96M42 142 aa3.4□□□□□ -1.86
NIPBL-204ENST00000504430 PMCHL2Q9BQD1 86 aa3.4□□□□□ -1.86
NIPBL-204ENST00000504430 TROQ12816 1431 aaPredicted RBP3.4□□□□□ -1.86
NIPBL-204ENST00000504430 HEATR5BQ9P2D3 2071 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms