RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 TEX36Q5VZQ5 186 aa13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 ZNF833PQ6ZTB9 187 aa13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 TRAV8-4A0A0B4J246 113 aa13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 ADARB2-AS1A8MUL3 147 aa13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 EREGO14944 169 aa13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 C14orf178Q8N769 122 aaPredicted RBP13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 CYYR1Q96J86 154 aa13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 WIPF3A6NGB9 483 aa13□□□□□ -0.33
HMGXB3-202ENST00000503427 ATXN8Q156A1 80 aa13□□□□□ -0.33
HMGXB3-202ENST00000503427 CSTL1Q9H114 145 aa13□□□□□ -0.33
HMGXB3-202ENST00000503427 PLXND1Q9Y4D7 1925 aa13□□□□□ -0.33
HMGXB3-202ENST00000503427 DENND4CQ5VZ89 1909 aa13□□□□□ -0.33
HMGXB3-202ENST00000503427 LTBP2Q14767 1821 aa13□□□□□ -0.33
HMGXB3-202ENST00000503427 KIR3DS1Q14943 382 aa13□□□□□ -0.33
HMGXB3-202ENST00000503427 WNK2Q9Y3S1 2297 aa13□□□□□ -0.33
HMGXB3-202ENST00000503427 SMKR1H3BMG3 65 aa13□□□□□ -0.33
HMGXB3-202ENST00000503427 TMEM249Q2WGJ8 235 aa13□□□□□ -0.33
HMGXB3-202ENST00000503427 FAM231DQ6ZW35 169 aa13□□□□□ -0.33
HMGXB3-202ENST00000503427 ZNRD1Q9P1U0 126 aa13□□□□□ -0.33
HMGXB3-202ENST00000503427 SP5Q6BEB4 398 aaPredicted RBP12.99□□□□□ -0.33
HMGXB3-202ENST00000503427 NDUFB8O95169 186 aa12.99□□□□□ -0.33
HMGXB3-202ENST00000503427 MSMBP08118 114 aa12.99□□□□□ -0.33
HMGXB3-202ENST00000503427 HTN3P15516 51 aa12.99□□□□□ -0.33
HMGXB3-202ENST00000503427 C17orf58Q2M2W7 97 aa12.99□□□□□ -0.33
HMGXB3-202ENST00000503427 SLC25A20O43772 301 aa12.99□□□□□ -0.33
HMGXB3-202ENST00000503427 FCN3O75636 299 aa12.99□□□□□ -0.33
HMGXB3-202ENST00000503427 TEX43Q6ZNM6 134 aa12.99□□□□□ -0.33
HMGXB3-202ENST00000503427 A0A1B0GUS0 222 aa12.98□□□□□ -0.33
HMGXB3-202ENST00000503427 CHCHD5Q9BSY4 110 aa12.98□□□□□ -0.33
HMGXB3-202ENST00000503427 FAM208BQ5VWN6 2430 aa12.98□□□□□ -0.33
HMGXB3-202ENST00000503427 TNFRSF6BO95407 300 aa12.98□□□□□ -0.33
HMGXB3-202ENST00000503427 CREBBPQ92793 2442 aa12.98□□□□□ -0.33
HMGXB3-202ENST00000503427 ZNF415Q09FC8 603 aa12.98□□□□□ -0.33
HMGXB3-202ENST00000503427 LINC00311Q8N616 119 aa12.98□□□□□ -0.33
HMGXB3-202ENST00000503427 V9GYV3 84 aa12.98□□□□□ -0.33
HMGXB3-202ENST00000503427 PTPRQQ9UMZ3 2332 aa12.98□□□□□ -0.33
HMGXB3-202ENST00000503427 TMEM86BQ8N661 226 aa12.98□□□□□ -0.33
HMGXB3-202ENST00000503427 ANAPC13Q9BS18 74 aa12.98□□□□□ -0.33
HMGXB3-202ENST00000503427 RHPN1-AS1Q9BWJ2 59 aa12.98□□□□□ -0.33
HMGXB3-202ENST00000503427 LSM4Q9Y4Z0 139 aaKnown RBP12.98□□□□□ -0.33
HMGXB3-202ENST00000503427 GGTLC3B5MD39 225 aa12.97□□□□□ -0.33
HMGXB3-202ENST00000503427 C15orf65H3BRN8 121 aa12.97□□□□□ -0.33
HMGXB3-202ENST00000503427 LOXP28300 417 aaPredicted RBP12.97□□□□□ -0.33
HMGXB3-202ENST00000503427 HAPLN4Q86UW8 402 aa12.97□□□□□ -0.33
HMGXB3-202ENST00000503427 DPH3Q96FX2 82 aa12.97□□□□□ -0.33
HMGXB3-202ENST00000503427 MCRIP2Q9BUT9 160 aaKnown RBP12.97□□□□□ -0.33
HMGXB3-202ENST00000503427 COX11Q9Y6N1 276 aa12.97□□□□□ -0.33
HMGXB3-202ENST00000503427 TRBV19A0A075B6N1 114 aa12.97□□□□□ -0.33
HMGXB3-202ENST00000503427 IGHV2-70P01814 119 aa12.97□□□□□ -0.33
HMGXB3-202ENST00000503427 DLX4Q92988 240 aaPredicted RBP12.97□□□□□ -0.33
HMGXB3-202ENST00000503427 SLX1AQ9BQ83 275 aa12.97□□□□□ -0.33
HMGXB3-202ENST00000503427 A0A0U1RRA0 63 aa12.97□□□□□ -0.33
HMGXB3-202ENST00000503427 PRSS46E5RG02 174 aa12.97□□□□□ -0.33
HMGXB3-202ENST00000503427 RPL36AP83881 106 aaKnown RBP12.97□□□□□ -0.33
HMGXB3-202ENST00000503427 RPL36ALQ969Q0 106 aaKnown RBP12.97□□□□□ -0.33
HMGXB3-202ENST00000503427 CHAC1Q9BUX1 264 aa12.97□□□□□ -0.33
HMGXB3-202ENST00000503427 FAM104BQ5XKR9 115 aa12.96□□□□□ -0.33
HMGXB3-202ENST00000503427 PLXNB3Q9ULL4 1909 aa12.96□□□□□ -0.33
HMGXB3-202ENST00000503427 ERCC8Q13216 396 aa12.96□□□□□ -0.33
HMGXB3-202ENST00000503427 FAM110DQ8TAY7 271 aaPredicted RBP12.96□□□□□ -0.33
HMGXB3-202ENST00000503427 CADP27708 2225 aa12.96□□□□□ -0.33
HMGXB3-202ENST00000503427 C11orf52Q96A22 123 aa12.96□□□□□ -0.34
HMGXB3-202ENST00000503427 PGPEP1Q9NXJ5 209 aa12.96□□□□□ -0.34
HMGXB3-202ENST00000503427 ABCA1O95477 2261 aa12.96□□□□□ -0.34
HMGXB3-202ENST00000503427 WT1P19544 449 aaPredicted RBP12.96□□□□□ -0.34
HMGXB3-202ENST00000503427 LYPD6BQ8NI32 183 aa12.96□□□□□ -0.34
HMGXB3-202ENST00000503427 DAZ1Q9NQZ3 744 aaKnown RBP12.96□□□□□ -0.34
HMGXB3-202ENST00000503427 SELENOKQ9Y6D0 94 aa12.96□□□□□ -0.34
HMGXB3-202ENST00000503427 KIF26AQ9ULI4 1882 aaPredicted RBP12.95□□□□□ -0.34
HMGXB3-202ENST00000503427 Q8NFD4 153 aa12.95□□□□□ -0.34
HMGXB3-202ENST00000503427 SMIM27A0A1W2PRY6 76 aa12.95□□□□□ -0.34
HMGXB3-202ENST00000503427 GAGE12BA1L429 117 aa12.95□□□□□ -0.34
HMGXB3-202ENST00000503427 TMEM213A2RRL7 107 aa12.95□□□□□ -0.34
HMGXB3-202ENST00000503427 LINC00158P58513 81 aa12.95□□□□□ -0.34
HMGXB3-202ENST00000503427 PRADC1Q9BSG0 188 aa12.95□□□□□ -0.34
HMGXB3-202ENST00000503427 SNHG12Q9BXW3 62 aa12.95□□□□□ -0.34
HMGXB3-202ENST00000503427 DOPEY2Q9Y3R5 2298 aa12.95□□□□□ -0.34
HMGXB3-202ENST00000503427 IGHV2-70DA0A0C4DH43 119 aa12.94□□□□□ -0.34
HMGXB3-202ENST00000503427 PIP4P2Q8N4L2 257 aa12.94□□□□□ -0.34
HMGXB3-202ENST00000503427 C11orf44Q8N8P7 122 aa12.94□□□□□ -0.34
HMGXB3-202ENST00000503427 RASL10AQ92737 203 aa12.94□□□□□ -0.34
HMGXB3-202ENST00000503427 IGHV3-73A0A0B4J1V6 119 aa12.94□□□□□ -0.34
HMGXB3-202ENST00000503427 KAAG1Q9UBP8 84 aa12.94□□□□□ -0.34
HMGXB3-202ENST00000503427 STPG4Q8N801 248 aa12.94□□□□□ -0.34
HMGXB3-202ENST00000503427 TMEM14CQ9P0S9 112 aa12.94□□□□□ -0.34
HMGXB3-202ENST00000503427 GTF3C1Q12789 2109 aa12.94□□□□□ -0.34
HMGXB3-202ENST00000503427 Q6ZWC4 215 aa12.94□□□□□ -0.34
HMGXB3-202ENST00000503427 IGHV1-69DA0A0B4J2H0 117 aa12.93□□□□□ -0.34
HMGXB3-202ENST00000503427 IGHV1-69P01742 117 aa12.93□□□□□ -0.34
HMGXB3-202ENST00000503427 ZNF114Q8NC26 417 aa12.93□□□□□ -0.34
HMGXB3-202ENST00000503427 IGLC2P0DOY2 106 aa12.93□□□□□ -0.34
HMGXB3-202ENST00000503427 IGLC3P0DOY3 106 aa12.93□□□□□ -0.34
HMGXB3-202ENST00000503427 ESDP10768 282 aa12.93□□□□□ -0.34
HMGXB3-202ENST00000503427 WT1-ASQ06250 92 aa12.93□□□□□ -0.34
HMGXB3-202ENST00000503427 GAGE2BQ13066 116 aa12.93□□□□□ -0.34
HMGXB3-202ENST00000503427 GAGE2EQ4V326 116 aa12.93□□□□□ -0.34
HMGXB3-202ENST00000503427 GAGE2DQ9UEU5 116 aa12.93□□□□□ -0.34
HMGXB3-202ENST00000503427 DOCK11Q5JSL3 2073 aa12.93□□□□□ -0.34
HMGXB3-202ENST00000503427 C2orf16Q68DN1 1984 aa12.93□□□□□ -0.34
HMGXB3-202ENST00000503427 SLAQ13239 276 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms