RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 CRXO43186 299 aaPredicted RBP4.12□□□□□ -1.75
CLDND1-208ENST00000503004 EIF4EBP3O60516 100 aaPredicted RBP4.12□□□□□ -1.75
CLDND1-208ENST00000503004 LYNX1P0DP58 116 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 RNASE2P10153 161 aaKnown RBP4.12□□□□□ -1.75
CLDND1-208ENST00000503004 FGF6P10767 208 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 ATP5IP56385 69 aaPredicted RBP4.12□□□□□ -1.75
CLDND1-208ENST00000503004 SRSF1Q07955 248 aaKnown RBP eCLIP4.12□□□□□ -1.75
CLDND1-208ENST00000503004 ZNF833PQ6ZTB9 187 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 FAM168AQ92567 244 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 NRGNQ92686 78 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 RNASE6Q93091 150 aaKnown RBP4.12□□□□□ -1.75
CLDND1-208ENST00000503004 ZNF503Q96F45 646 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 TPSG1Q9NRR2 321 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 ONECUT1Q9UBC0 465 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 RABAC1Q9UI14 185 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 TRAV5A0A0B4J249 113 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 A0A1W2PRD5 423 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 A0A1W2PRF3 423 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 A0A1W2PRM7 423 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 GAGE12JA6NER3 117 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 PRSS29PA6NIE9 313 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 K7EMI3 77 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 GAGE7O76087 117 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 MT-ND6P03923 174 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 GAGE12FP0CL80 117 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 GAGE12GP0CL81 117 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 GAGE12IP0CL82 117 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 TNP2Q05952 138 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 WT1-ASQ06250 92 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 FOXC1Q12948 553 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 GAGE4Q13068 117 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 SPACA3Q8IXA5 215 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 OR5AN1Q8NGI8 311 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 FLYWCH2Q96CP2 140 aaKnown RBP4.12□□□□□ -1.75
CLDND1-208ENST00000503004 MS4A6AQ9H2W1 248 aa4.12□□□□□ -1.75
CLDND1-208ENST00000503004 SMIM9A6NGZ8 99 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 GGTLC3B5MD39 225 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 E7EQL1 145 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 F8W1H4 67 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 NDUFB3O43676 98 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 PLAUP00749 431 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 LOXP28300 417 aaPredicted RBP4.11□□□□□ -1.75
CLDND1-208ENST00000503004 MFAP2P55001 183 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 CX3CL1P78423 397 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 CD69Q07108 199 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 KLRD1Q13241 179 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 CENPWQ5EE01 88 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 RUSC1-AS1Q66K80 236 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 Q6AWC8 147 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 WFDC3Q8IUB2 231 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 OR4C13Q8NGP0 309 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 C8orf46Q8TAG6 207 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 DYNLRB1Q9NP97 96 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 ZNF331Q9NQX6 463 aaPredicted RBP4.11□□□□□ -1.75
CLDND1-208ENST00000503004 NDUFA4L2Q9NRX3 87 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 MRPL36Q9P0J6 103 aaKnown RBP4.11□□□□□ -1.75
CLDND1-208ENST00000503004 PRO0461Q9UI25 63 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 A0A1W2PRE2 83 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 CGB1A6NKQ9 187 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 SHISA9B4DS77 424 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 AMY1AP04745 511 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 RPL11P62913 178 aaKnown RBP4.11□□□□□ -1.75
CLDND1-208ENST00000503004 C2orf83Q53S99 150 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 HCP5Q6MZN7 132 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 ASCL5Q7RTU5 278 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 Q8N1Y9 231 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 LINC00479Q96M42 142 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 KIR2DL4Q99706 377 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 SCNM1Q9BWG6 230 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 TMEM191AQ9H0A3 160 aa4.11□□□□□ -1.75
CLDND1-208ENST00000503004 IGHV3-21A0A0B4J1V1 117 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 ENSAO43768 121 aaKnown RBP4.1□□□□□ -1.75
CLDND1-208ENST00000503004 CSN3P07498 182 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 PYYP10082 97 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 CNTFRP26992 372 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 PPIFP30405 207 aaKnown RBP4.1□□□□□ -1.75
CLDND1-208ENST00000503004 GDF5OSQ5U4N7 250 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 TEX45Q8NA69 505 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 LINC01560Q8TB33 94 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 NPIPB3Q92617 1050 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 TXNDC17Q9BRA2 123 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 ZNF355PQ9NSJ1 428 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 F11RQ9Y624 299 aaKnown RBP4.1□□□□□ -1.75
CLDND1-208ENST00000503004 CELSR2Q9HCU4 2923 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 CSMD2Q7Z408 3487 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 HIVEP3Q5T1R4 2406 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.1□□□□□ -1.75
CLDND1-208ENST00000503004 CHEK1O14757 476 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 LY6HO94772 140 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 LEPROTL1O95214 131 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 IGLV2-23P01705 113 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 HLA-DQA1P01909 254 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 NBL1P41271 181 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 ERHP84090 104 aaKnown RBP4.1□□□□□ -1.75
CLDND1-208ENST00000503004 ZFAND6Q6FIF0 208 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 OR1L8Q8NGR8 309 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 GTSF1Q8WW33 167 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 SGK494Q96LW2 274 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 SLC25A33Q9BSK2 321 aa4.1□□□□□ -1.75
CLDND1-208ENST00000503004 TMEM133Q9H2Q1 129 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms