RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 CDKN1BP46527 198 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 TAS2R31P59538 309 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 TSPAN5P62079 268 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 CATR1Q13166 79 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 DEFB135Q30KP9 77 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 Q56UQ5 140 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 UBE2NLQ5JXB2 153 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 ACOT7LQ6ZUV0 252 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 SLC16A13Q7RTY0 426 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 RPP25LQ8N5L8 163 aaKnown RBP1.88□□□□□ -2.11
SRRM1-219ENST00000495561 FAM24BQ8N5W8 94 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 GDPD1Q8N9F7 314 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 OR1L8Q8NGR8 309 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 OR2K2Q8NGT1 345 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 OR5H2Q8NGV7 314 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 OR4A5Q8NH83 315 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 GPX8Q8TED1 209 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 SLC25A46Q96AG3 418 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 MRGPRFQ96AM1 343 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 DGCR14Q96DF8 476 aaKnown RBP1.88□□□□□ -2.11
SRRM1-219ENST00000495561 PGLYRP4Q96LB8 373 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 HIST1H4GQ99525 98 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 GGTLC1Q9BX51 225 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 NDUFA4L2Q9NRX3 87 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 C21orf62Q9NYP8 219 aa1.88□□□□□ -2.11
SRRM1-219ENST00000495561 F11RQ9Y624 299 aaKnown RBP1.88□□□□□ -2.11
SRRM1-219ENST00000495561 STARD9Q9P2P6 4700 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 A0A087WXM4 84 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 A0A0A6YYH2 397 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 A0A0G2JRQ6 117 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 SMIM31A0A1B0GVY4 71 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 A6NJ64 397 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 KNCNA6PVL3 124 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 A8MWP6 167 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 FAM25AB3EWG3 89 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 FAM25CB3EWG5 89 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 FAM25GB3EWG6 89 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 I3L2K1 104 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 GPR31O00270 319 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 NUPL2O15504 423 aaKnown RBP1.87□□□□□ -2.11
SRRM1-219ENST00000495561 RBFOX2O43251 390 aaKnown RBP eCLIP1.87□□□□□ -2.11
SRRM1-219ENST00000495561 MED6O75586 246 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 DHFRP00374 187 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 MT-CO2P00403 227 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 IGKV1-5P01602 117 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 CD3DP04234 171 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 S100A9P06702 114 aaKnown RBP1.87□□□□□ -2.11
SRRM1-219ENST00000495561 C8orf88P0DMB2 117 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 ETV6P41212 452 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 CBX5P45973 191 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 PIGPP57054 158 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 TAS2R46P59540 309 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 POU2AF1Q16633 256 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 SCGB2B2Q4G0G5 96 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 GPR107Q5VW38 600 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 Q6ZN92 141 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 TCF24Q7RTU0 167 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 LYG2Q86SG7 212 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 CMTM1Q8IZ96 169 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 CD300LFQ8TDQ1 290 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 LSM10Q969L4 123 aaKnown RBP1.87□□□□□ -2.11
SRRM1-219ENST00000495561 RPUSD4Q96CM3 377 aaKnown RBP1.87□□□□□ -2.11
SRRM1-219ENST00000495561 TP53RKQ96S44 253 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 RHPN1-AS1Q9BWJ2 59 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 ZNF436Q9C0F3 470 aaPredicted RBP1.87□□□□□ -2.11
SRRM1-219ENST00000495561 DAZ1Q9NQZ3 744 aaKnown RBP1.87□□□□□ -2.11
SRRM1-219ENST00000495561 TMEM14BQ9NUH8 114 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 COMMD9Q9P000 198 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 MRPL36Q9P0J6 103 aaKnown RBP1.87□□□□□ -2.11
SRRM1-219ENST00000495561 MRPL27Q9P0M9 148 aaKnown RBP1.87□□□□□ -2.11
SRRM1-219ENST00000495561 SMPXQ9UHP9 88 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 PRNDQ9UKY0 176 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 ANAPC10Q9UM13 185 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 UFC1Q9Y3C8 167 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 SACSQ9NZJ4 4579 aa1.87□□□□□ -2.11
SRRM1-219ENST00000495561 DYNC2H1Q8NCM8 4307 aaKnown RBP1.86□□□□□ -2.11
SRRM1-219ENST00000495561 TRAV14DV4A0A0A6YYC5 116 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 IGHV7-4-1A0A0J9YVY3 117 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 C3orf85A0A1B0GTC6 90 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 DNASE2O00115 360 aaPredicted RBP1.86□□□□□ -2.11
SRRM1-219ENST00000495561 NDUFA4O00483 81 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 RGS5O15539 181 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 GNG7O60262 68 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 TNFAIP8O95379 198 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 IFNA17P01571 189 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 APOA1P02647 267 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 ZNF688P0C7X2 276 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 RNASE2P10153 161 aaKnown RBP1.86□□□□□ -2.11
SRRM1-219ENST00000495561 PRB4P10163 310 aaPredicted RBP1.86□□□□□ -2.11
SRRM1-219ENST00000495561 RCVRNP35243 200 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 NUP62P37198 522 aaPredicted RBP1.86□□□□□ -2.11
SRRM1-219ENST00000495561 SNCAP37840 140 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 RORCP51449 518 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 AKR1C2P52895 323 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 DEFB131AP59861 70 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 DEFB1P60022 68 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 HSPE1P61604 102 aaKnown RBP1.86□□□□□ -2.11
SRRM1-219ENST00000495561 SELENOTP62341 195 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 RAB11AP62491 216 aa1.86□□□□□ -2.11
SRRM1-219ENST00000495561 ERHP84090 104 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms