RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 ZNF705BP0CI00 300 aaPredicted RBP8.85□□□□□ -0.99
CSNK1E-213ENST00000495232 CNN1P51911 297 aaKnown RBP8.85□□□□□ -0.99
CSNK1E-213ENST00000495232 RPP25LQ8N5L8 163 aaKnown RBP8.85□□□□□ -0.99
CSNK1E-213ENST00000495232 OR8A1Q8NGG7 326 aa8.85□□□□□ -0.99
CSNK1E-213ENST00000495232 FXYD5Q96DB9 178 aa8.85□□□□□ -0.99
CSNK1E-213ENST00000495232 MRPL53Q96EL3 112 aaKnown RBP8.85□□□□□ -0.99
CSNK1E-213ENST00000495232 RARRES2Q99969 163 aa8.85□□□□□ -0.99
CSNK1E-213ENST00000495232 XCL2Q9UBD3 114 aa8.85□□□□□ -0.99
CSNK1E-213ENST00000495232 EIF3GO75821 320 aaKnown RBP eCLIP8.84□□□□□ -0.99
CSNK1E-213ENST00000495232 C4BPBP20851 252 aa8.84□□□□□ -0.99
CSNK1E-213ENST00000495232 CSN1S1P47710 185 aa8.84□□□□□ -0.99
CSNK1E-213ENST00000495232 FXYD7P58549 80 aa8.84□□□□□ -0.99
CSNK1E-213ENST00000495232 RANP62826 216 aaKnown RBP8.84□□□□□ -0.99
CSNK1E-213ENST00000495232 ICAM4Q14773 271 aa8.84□□□□□ -0.99
CSNK1E-213ENST00000495232 EXOC3-AS1Q8N2X6 119 aa8.84□□□□□ -0.99
CSNK1E-213ENST00000495232 OR11H2Q8NH07 326 aa8.84□□□□□ -0.99
CSNK1E-213ENST00000495232 RAB24Q969Q5 203 aa8.84□□□□□ -0.99
CSNK1E-213ENST00000495232 SLC35B3Q9H1N7 401 aa8.84□□□□□ -0.99
CSNK1E-213ENST00000495232 A0A1B0GVG6 124 aa8.83□□□□□ -1
CSNK1E-213ENST00000495232 NDUFB4O95168 129 aa8.83□□□□□ -1
CSNK1E-213ENST00000495232 CXorf1O96002 111 aa8.83□□□□□ -1
CSNK1E-213ENST00000495232 AMBPP02760 352 aa8.83□□□□□ -1
CSNK1E-213ENST00000495232 STAG3L2P0CL84 134 aa8.83□□□□□ -1
CSNK1E-213ENST00000495232 STAG3L3P0CL85 134 aa8.83□□□□□ -1
CSNK1E-213ENST00000495232 ARL14EPLP0DKL9 152 aa8.83□□□□□ -1
CSNK1E-213ENST00000495232 TPT1P13693 172 aaKnown RBP8.83□□□□□ -1
CSNK1E-213ENST00000495232 ZFP69Q49AA0 526 aa8.83□□□□□ -1
CSNK1E-213ENST00000495232 FAM74A1Q5RGS3 127 aa8.83□□□□□ -1
CSNK1E-213ENST00000495232 IQCF2Q8IXL9 164 aa8.83□□□□□ -1
CSNK1E-213ENST00000495232 LYPD1Q8N2G4 141 aa8.83□□□□□ -1
CSNK1E-213ENST00000495232 ZNF503Q96F45 646 aa8.83□□□□□ -1
CSNK1E-213ENST00000495232 CTXND1A0A1B0GTU2 59 aa8.82□□□□□ -1
CSNK1E-213ENST00000495232 M0R3E3 92 aa8.82□□□□□ -1
CSNK1E-213ENST00000495232 GIG44P09565 113 aaPredicted RBP8.82□□□□□ -1
CSNK1E-213ENST00000495232 SEC11BP0C7V7 166 aa8.82□□□□□ -1
CSNK1E-213ENST00000495232 PRB4P10163 310 aaPredicted RBP8.82□□□□□ -1
CSNK1E-213ENST00000495232 LGALSLQ3ZCW2 172 aaPredicted RBP8.82□□□□□ -1
CSNK1E-213ENST00000495232 BAP18Q8IXM2 172 aa8.82□□□□□ -1
CSNK1E-213ENST00000495232 PHYHIPLQ96FC7 376 aa8.82□□□□□ -1
CSNK1E-213ENST00000495232 Q9H3A6 140 aa8.82□□□□□ -1
CSNK1E-213ENST00000495232 TMEM167BQ9NRX6 74 aa8.82□□□□□ -1
CSNK1E-213ENST00000495232 TENM3Q9P273 2699 aa8.82□□□□□ -1
CSNK1E-213ENST00000495232 IGHV3OR16-12A0A075B7B8 117 aa8.81□□□□□ -1
CSNK1E-213ENST00000495232 A8MTW9 85 aa8.81□□□□□ -1
CSNK1E-213ENST00000495232 UMAD1C9J7I0 102 aa8.81□□□□□ -1
CSNK1E-213ENST00000495232 PRAC2D3DTV9 90 aa8.81□□□□□ -1
CSNK1E-213ENST00000495232 BOLA2-SMG1P6H3BVE0 249 aa8.81□□□□□ -1
CSNK1E-213ENST00000495232 TSPOP30536 169 aa8.81□□□□□ -1
CSNK1E-213ENST00000495232 SPINK13Q1W4C9 94 aa8.81□□□□□ -1
CSNK1E-213ENST00000495232 EIF5AL1Q6IS14 154 aaKnown RBP8.81□□□□□ -1
CSNK1E-213ENST00000495232 CMTM2Q8TAZ6 248 aa8.81□□□□□ -1
CSNK1E-213ENST00000495232 TMEM208Q9BTX3 173 aa8.81□□□□□ -1
CSNK1E-213ENST00000495232 GOLT1BQ9Y3E0 138 aa8.81□□□□□ -1
CSNK1E-213ENST00000495232 A0A0J9YWU9 116 aa8.8□□□□□ -1
CSNK1E-213ENST00000495232 PGPA6NDG6 321 aa8.8□□□□□ -1
CSNK1E-213ENST00000495232 M0R2Z0 102 aa8.8□□□□□ -1
CSNK1E-213ENST00000495232 GCHFRP30047 84 aa8.8□□□□□ -1
CSNK1E-213ENST00000495232 CDKN1BP46527 198 aa8.8□□□□□ -1
CSNK1E-213ENST00000495232 TMEM78Q5T7P6 136 aa8.8□□□□□ -1
CSNK1E-213ENST00000495232 AMTNQ6UX39 209 aa8.8□□□□□ -1
CSNK1E-213ENST00000495232 CSNK1G2-AS1Q8NCQ2 148 aa8.8□□□□□ -1
CSNK1E-213ENST00000495232 STOML3Q8TAV4 291 aa8.8□□□□□ -1
CSNK1E-213ENST00000495232 RXFP4Q8TDU9 374 aa8.8□□□□□ -1
CSNK1E-213ENST00000495232 IGF2BP2-AS1Q96M15 143 aa8.8□□□□□ -1
CSNK1E-213ENST00000495232 EDA2RQ9HAV5 297 aa8.8□□□□□ -1
CSNK1E-213ENST00000495232 OTORQ9NRC9 128 aa8.8□□□□□ -1
CSNK1E-213ENST00000495232 STAB2Q8WWQ8 2551 aa8.79□□□□□ -1
CSNK1E-213ENST00000495232 ZNF705EA8MWA4 302 aaPredicted RBP8.79□□□□□ -1
CSNK1E-213ENST00000495232 INSP01308 110 aa8.79□□□□□ -1
CSNK1E-213ENST00000495232 MIFP14174 115 aa8.79□□□□□ -1
CSNK1E-213ENST00000495232 CD300CQ08708 224 aa8.79□□□□□ -1
CSNK1E-213ENST00000495232 SLC51BQ86UW2 128 aa8.79□□□□□ -1
CSNK1E-213ENST00000495232 TMED6Q8WW62 240 aa8.79□□□□□ -1
CSNK1E-213ENST00000495232 LINC00477Q96M19 166 aa8.79□□□□□ -1
CSNK1E-213ENST00000495232 TRAV12-2A0A075B6T6 113 aa8.78□□□□□ -1
CSNK1E-213ENST00000495232 IGKV2-40A0A087WW87 121 aaPredicted RBP8.78□□□□□ -1
CSNK1E-213ENST00000495232 MAP1LC3B2A6NCE7 125 aa8.78□□□□□ -1
CSNK1E-213ENST00000495232 NPIPB6E9PJ23 425 aa8.78□□□□□ -1
CSNK1E-213ENST00000495232 IGKV2D-40P01614 121 aaPredicted RBP8.78□□□□□ -1
CSNK1E-213ENST00000495232 LEPP41159 167 aa8.78□□□□□ -1
CSNK1E-213ENST00000495232 FGF8P55075 233 aaPredicted RBP8.78□□□□□ -1
CSNK1E-213ENST00000495232 ERCC8Q13216 396 aa8.78□□□□□ -1
CSNK1E-213ENST00000495232 ZNF726P1Q15940 193 aa8.78□□□□□ -1
CSNK1E-213ENST00000495232 DPPA3Q6W0C5 159 aa8.78□□□□□ -1
CSNK1E-213ENST00000495232 SSX7Q7RTT5 188 aa8.78□□□□□ -1
CSNK1E-213ENST00000495232 IL17DQ8TAD2 202 aa8.78□□□□□ -1
CSNK1E-213ENST00000495232 FAM213BQ8TBF2 198 aa8.78□□□□□ -1
CSNK1E-213ENST00000495232 ODF3Q96PU9 254 aa8.78□□□□□ -1
CSNK1E-213ENST00000495232 MAP1LC3BQ9GZQ8 125 aa8.78□□□□□ -1
CSNK1E-213ENST00000495232 RPH3ALQ9UNE2 315 aa8.78□□□□□ -1
CSNK1E-213ENST00000495232 SMIM9A6NGZ8 99 aa8.77□□□□□ -1.01
CSNK1E-213ENST00000495232 HBE1P02100 147 aa8.77□□□□□ -1.01
CSNK1E-213ENST00000495232 SLC25A5P05141 298 aaKnown RBP8.77□□□□□ -1.01
CSNK1E-213ENST00000495232 CT45A10P0DMU9 189 aa8.77□□□□□ -1.01
CSNK1E-213ENST00000495232 C9orf47Q6ZRZ4 202 aa8.77□□□□□ -1.01
CSNK1E-213ENST00000495232 MUC7Q8TAX7 377 aa8.77□□□□□ -1.01
CSNK1E-213ENST00000495232 SUN5Q8TC36 379 aa8.77□□□□□ -1.01
CSNK1E-213ENST00000495232 DNAH7Q8WXX0 4024 aa8.76□□□□□ -1.01
CSNK1E-213ENST00000495232 IGHV4-28A0A0C4DH34 117 aa8.76□□□□□ -1.01
CSNK1E-213ENST00000495232 RBAKDNA6NC62 111 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms