RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 F5H768 121 aa8.14□□□□□ -1.11
VTI1A-208ENST00000494728 J3KRW8 73 aa8.14□□□□□ -1.11
VTI1A-208ENST00000494728 S100A10P60903 97 aa8.14□□□□□ -1.11
VTI1A-208ENST00000494728 B2MP61769 119 aa8.14□□□□□ -1.11
VTI1A-208ENST00000494728 RAB32Q13637 225 aa8.14□□□□□ -1.11
VTI1A-208ENST00000494728 ZNF846Q147U1 533 aa8.14□□□□□ -1.11
VTI1A-208ENST00000494728 GCSAMLQ5JQS6 135 aa8.14□□□□□ -1.11
VTI1A-208ENST00000494728 ZNF575Q86XF7 245 aa8.14□□□□□ -1.11
VTI1A-208ENST00000494728 TMEM256Q8N2U0 113 aa8.14□□□□□ -1.11
VTI1A-208ENST00000494728 C15orf53Q8NAA6 179 aa8.14□□□□□ -1.11
VTI1A-208ENST00000494728 TMEM263Q8WUH6 116 aaKnown RBP8.14□□□□□ -1.11
VTI1A-208ENST00000494728 RNF141Q8WVD5 230 aa8.14□□□□□ -1.11
VTI1A-208ENST00000494728 C16orf74Q96GX8 76 aa8.14□□□□□ -1.11
VTI1A-208ENST00000494728 NOP10Q9NPE3 64 aaKnown RBP8.14□□□□□ -1.11
VTI1A-208ENST00000494728 LYRM2Q9NU23 88 aaPredicted RBP8.14□□□□□ -1.11
VTI1A-208ENST00000494728 UQCC1Q9NVA1 299 aa8.14□□□□□ -1.11
VTI1A-208ENST00000494728 ZNF586Q9NXT0 402 aa8.14□□□□□ -1.11
VTI1A-208ENST00000494728 NPIPB6E9PJ23 425 aa8.13□□□□□ -1.11
VTI1A-208ENST00000494728 M0R3E3 92 aa8.13□□□□□ -1.11
VTI1A-208ENST00000494728 H2AFB2P0C5Z0 115 aa8.13□□□□□ -1.11
VTI1A-208ENST00000494728 CT45A10P0DMU9 189 aa8.13□□□□□ -1.11
VTI1A-208ENST00000494728 TMEM252Q8N6L7 170 aa8.13□□□□□ -1.11
VTI1A-208ENST00000494728 LINC00612Q8N6U2 182 aa8.13□□□□□ -1.11
VTI1A-208ENST00000494728 ZNRF2Q8NHG8 242 aa8.13□□□□□ -1.11
VTI1A-208ENST00000494728 C2orf50Q96LR7 162 aa8.13□□□□□ -1.11
VTI1A-208ENST00000494728 PPP1R14DQ9NXH3 145 aa8.13□□□□□ -1.11
VTI1A-208ENST00000494728 H7BYZ3 331 aa8.12□□□□□ -1.11
VTI1A-208ENST00000494728 NDUFB4O95168 129 aa8.12□□□□□ -1.11
VTI1A-208ENST00000494728 NUDT3O95989 172 aa8.12□□□□□ -1.11
VTI1A-208ENST00000494728 ATP5G1P05496 136 aa8.12□□□□□ -1.11
VTI1A-208ENST00000494728 PYYP10082 97 aa8.12□□□□□ -1.11
VTI1A-208ENST00000494728 HOXA5P20719 270 aa8.12□□□□□ -1.11
VTI1A-208ENST00000494728 ATP5G3P48201 142 aa8.12□□□□□ -1.11
VTI1A-208ENST00000494728 SULT1A1P50225 295 aa8.12□□□□□ -1.11
VTI1A-208ENST00000494728 BAXQ07812 192 aa8.12□□□□□ -1.11
VTI1A-208ENST00000494728 S100A7AQ86SG5 101 aa8.12□□□□□ -1.11
VTI1A-208ENST00000494728 CCDC32Q9BV29 185 aa8.12□□□□□ -1.11
VTI1A-208ENST00000494728 KRTAP1-5Q9BYS1 174 aa8.12□□□□□ -1.11
VTI1A-208ENST00000494728 DNAJC4Q9NNZ3 241 aa8.12□□□□□ -1.11
VTI1A-208ENST00000494728 SLC39A9Q9NUM3 307 aa8.12□□□□□ -1.11
VTI1A-208ENST00000494728 PTTG2Q9NZH5 202 aa8.12□□□□□ -1.11
VTI1A-208ENST00000494728 LINC00588Q9Y4M8 146 aa8.12□□□□□ -1.11
VTI1A-208ENST00000494728 PXMP4Q9Y6I8 212 aa8.12□□□□□ -1.11
VTI1A-208ENST00000494728 TRAV12-3A0A0B4J271 114 aa8.11□□□□□ -1.11
VTI1A-208ENST00000494728 CBY3A6NI87 242 aa8.11□□□□□ -1.11
VTI1A-208ENST00000494728 SIX6O95475 246 aa8.11□□□□□ -1.11
VTI1A-208ENST00000494728 FGF7P21781 194 aa8.11□□□□□ -1.11
VTI1A-208ENST00000494728 RPL29P47914 159 aaKnown RBP8.11□□□□□ -1.11
VTI1A-208ENST00000494728 ERCC8Q13216 396 aa8.11□□□□□ -1.11
VTI1A-208ENST00000494728 OR10J6PQ8NGY7 276 aa8.11□□□□□ -1.11
VTI1A-208ENST00000494728 S100ZQ8WXG8 99 aa8.11□□□□□ -1.11
VTI1A-208ENST00000494728 BATF3Q9NR55 127 aa8.11□□□□□ -1.11
VTI1A-208ENST00000494728 TIMM8BQ9Y5J9 83 aaPredicted RBP8.11□□□□□ -1.11
VTI1A-208ENST00000494728 TRBV19A0A075B6N1 114 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 NBDYA0A0U1RRE5 68 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 FAM240BA0A1B0GVZ2 78 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 MED14OSP0DP75 135 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 IFITM3Q01628 133 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 TNP2Q05952 138 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 ASAH1Q13510 395 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 PRR9Q5T870 116 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 C1orf134Q5TEV5 83 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 Q6ZQT7 251 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 ZNF493Q6ZR52 646 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 Q6ZRG5 221 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 OR1L4Q8NGR5 311 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 PFDN5Q99471 154 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 C20orf144Q9BQM9 153 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 ATG101Q9BSB4 218 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 NPCDR1Q9BY65 106 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 GPN1Q9HCN4 374 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-208ENST00000494728 OR5AC2Q9NZP5 309 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 RNF24Q9Y225 148 aa8.1□□□□□ -1.11
VTI1A-208ENST00000494728 TRAV26-1A0A087WT03 109 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 GAGE12BA1L429 117 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 H0YIZ8 118 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 GAGE7O76087 117 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 GAGE12FP0CL80 117 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 GAGE12GP0CL81 117 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 GAGE12IP0CL82 117 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 PVALBP20472 110 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-208ENST00000494728 S100A11P31949 105 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 FAM3BP58499 235 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-208ENST00000494728 NHLH2Q02577 135 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 BTN1A1Q13410 526 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 LINC00299Q6ZSB3 139 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 Q6ZTI0 123 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 STX12Q86Y82 276 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 EXOC3-AS1Q8N2X6 119 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 THAP6Q8TBB0 222 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 FAM167A-AS1Q96KT0 104 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 FAM19A4Q96LR4 140 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 ODF3Q96PU9 254 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 SLC25A2Q9BXI2 301 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 KRTAP4-5Q9BYR2 181 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 TMPRSS5Q9H3S3 457 aa8.09□□□□□ -1.11
VTI1A-208ENST00000494728 IGKV2-40A0A087WW87 121 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-208ENST00000494728 A0A0J9YY99 117 aa8.08□□□□□ -1.12
VTI1A-208ENST00000494728 ZNF253O75346 499 aa8.08□□□□□ -1.12
VTI1A-208ENST00000494728 IGKV2D-40P01614 121 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 561.9 ms