RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 OR10J6PQ8NGY7 276 aa23.68■■□□□ 1.38
CBX4-203ENST00000494546 LINC01587Q99440 93 aa23.67■■□□□ 1.38
CBX4-203ENST00000494546 CDKN1BP46527 198 aa23.66■■□□□ 1.38
CBX4-203ENST00000494546 EPPK1P58107 5090 aaKnown RBP23.66■■□□□ 1.38
CBX4-203ENST00000494546 HTN3P15516 51 aa23.65■■□□□ 1.38
CBX4-203ENST00000494546 NDUFAF3Q9BU61 184 aa23.65■■□□□ 1.38
CBX4-203ENST00000494546 WDR61Q9GZS3 305 aaKnown RBP23.65■■□□□ 1.38
CBX4-203ENST00000494546 MPC2O95563 127 aa23.64■■□□□ 1.37
CBX4-203ENST00000494546 PET100P0DJ07 73 aa23.64■■□□□ 1.37
CBX4-203ENST00000494546 TMEM256Q8N2U0 113 aa23.64■■□□□ 1.37
CBX4-203ENST00000494546 TMEM14CQ9P0S9 112 aa23.64■■□□□ 1.37
CBX4-203ENST00000494546 TRBV19A0A075B6N1 114 aa23.63■■□□□ 1.37
CBX4-203ENST00000494546 ZNF253O75346 499 aa23.63■■□□□ 1.37
CBX4-203ENST00000494546 PYYP10082 97 aa23.63■■□□□ 1.37
CBX4-203ENST00000494546 DAD1P61803 113 aa23.63■■□□□ 1.37
CBX4-203ENST00000494546 PARD6GQ9BYG4 376 aaPredicted RBP23.63■■□□□ 1.37
CBX4-203ENST00000494546 HIST1H1EP10412 219 aaKnown RBP23.62■■□□□ 1.37
CBX4-203ENST00000494546 HTN1P15515 57 aa23.62■■□□□ 1.37
CBX4-203ENST00000494546 AZU1P20160 251 aa23.62■■□□□ 1.37
CBX4-203ENST00000494546 OXA1LQ15070 435 aa23.62■■□□□ 1.37
CBX4-203ENST00000494546 TIMM9Q9Y5J7 89 aa23.62■■□□□ 1.37
CBX4-203ENST00000494546 TSPOP30536 169 aa23.61■■□□□ 1.37
CBX4-203ENST00000494546 BLNKQ8WV28 456 aa23.61■■□□□ 1.37
CBX4-203ENST00000494546 ATP5SQ99766 215 aa23.61■■□□□ 1.37
CBX4-203ENST00000494546 KCNIP2Q9NS61 270 aa23.61■■□□□ 1.37
CBX4-203ENST00000494546 KMT2AQ03164 3969 aa23.6■■□□□ 1.37
CBX4-203ENST00000494546 TAS2R60P59551 318 aa23.6■■□□□ 1.37
CBX4-203ENST00000494546 KIR3DS1Q14943 382 aa23.6■■□□□ 1.37
CBX4-203ENST00000494546 MIR17HGQ75NE6 70 aa23.6■■□□□ 1.37
CBX4-203ENST00000494546 SLC25A2Q9BXI2 301 aa23.6■■□□□ 1.37
CBX4-203ENST00000494546 HSPB11Q9Y547 144 aa23.6■■□□□ 1.37
CBX4-203ENST00000494546 MBD2Q9UBB5 411 aa23.59■■□□□ 1.37
CBX4-203ENST00000494546 C17orf112F2Z3M2 114 aa23.58■■□□□ 1.37
CBX4-203ENST00000494546 NDUFB4O95168 129 aa23.58■■□□□ 1.37
CBX4-203ENST00000494546 SMIM3Q9BZL3 60 aa23.58■■□□□ 1.37
CBX4-203ENST00000494546 LYRM9A8MSI8 78 aa23.57■■□□□ 1.36
CBX4-203ENST00000494546 J3KRW8 73 aa23.57■■□□□ 1.36
CBX4-203ENST00000494546 M0R3E3 92 aa23.57■■□□□ 1.36
CBX4-203ENST00000494546 RPL12P30050 165 aaKnown RBP23.57■■□□□ 1.36
CBX4-203ENST00000494546 MRPL53Q96EL3 112 aaKnown RBP23.57■■□□□ 1.36
CBX4-203ENST00000494546 ALG5Q9Y673 324 aa23.57■■□□□ 1.36
CBX4-203ENST00000494546 NPIPB6E9PJ23 425 aa23.56■■□□□ 1.36
CBX4-203ENST00000494546 CT45A10P0DMU9 189 aa23.56■■□□□ 1.36
CBX4-203ENST00000494546 PDE6HQ13956 83 aa23.56■■□□□ 1.36
CBX4-203ENST00000494546 GFI1BQ5VTD9 330 aa23.56■■□□□ 1.36
CBX4-203ENST00000494546 FAM167A-AS1Q96KT0 104 aa23.56■■□□□ 1.36
CBX4-203ENST00000494546 PLAC8L1A1L4L8 177 aa23.55■■□□□ 1.36
CBX4-203ENST00000494546 H7BYZ3 331 aa23.55■■□□□ 1.36
CBX4-203ENST00000494546 DEFB130BP0DP73 79 aa23.55■■□□□ 1.36
CBX4-203ENST00000494546 DEFB130AP0DP74 79 aa23.55■■□□□ 1.36
CBX4-203ENST00000494546 FCN2Q15485 313 aa23.55■■□□□ 1.36
CBX4-203ENST00000494546 EXOC3-AS1Q8N2X6 119 aa23.55■■□□□ 1.36
CBX4-203ENST00000494546 C16orf74Q96GX8 76 aa23.55■■□□□ 1.36
CBX4-203ENST00000494546 FAM210BQ96KR6 192 aa23.55■■□□□ 1.36
CBX4-203ENST00000494546 C20orf144Q9BQM9 153 aa23.55■■□□□ 1.36
CBX4-203ENST00000494546 MRPL32Q9BYC8 188 aaKnown RBP23.55■■□□□ 1.36
CBX4-203ENST00000494546 P0DMU3 169 aa23.54■■□□□ 1.36
CBX4-203ENST00000494546 FAM231AP0DMU4 169 aa23.54■■□□□ 1.36
CBX4-203ENST00000494546 FAM231CP0DMU5 169 aa23.54■■□□□ 1.36
CBX4-203ENST00000494546 LEPP41159 167 aa23.54■■□□□ 1.36
CBX4-203ENST00000494546 PRELID1Q9Y255 219 aa23.54■■□□□ 1.36
CBX4-203ENST00000494546 VPS13DQ5THJ4 4388 aa23.54■■□□□ 1.36
CBX4-203ENST00000494546 IFNA5P01569 189 aa23.53■■□□□ 1.36
CBX4-203ENST00000494546 SCGB1C1Q8TD33 95 aa23.53■■□□□ 1.36
CBX4-203ENST00000494546 ODF3Q96PU9 254 aa23.53■■□□□ 1.36
CBX4-203ENST00000494546 OR51M1Q9H341 326 aa23.53■■□□□ 1.36
CBX4-203ENST00000494546 AAMDCQ9H7C9 122 aa23.53■■□□□ 1.36
CBX4-203ENST00000494546 FUT9Q9Y231 359 aa23.53■■□□□ 1.36
CBX4-203ENST00000494546 PTTG1O95997 202 aa23.52■■□□□ 1.36
CBX4-203ENST00000494546 ERCC8Q13216 396 aa23.52■■□□□ 1.36
CBX4-203ENST00000494546 NBEAP1P0C6P0 100 aa23.51■■□□□ 1.35
CBX4-203ENST00000494546 ICAM4Q14773 271 aa23.51■■□□□ 1.35
CBX4-203ENST00000494546 FFAR4Q5NUL3 377 aa23.51■■□□□ 1.35
CBX4-203ENST00000494546 PAXXQ9BUH6 204 aa23.51■■□□□ 1.35
CBX4-203ENST00000494546 OR10J4P0C629 311 aa23.5■■□□□ 1.35
CBX4-203ENST00000494546 ZNF493Q6ZR52 646 aa23.5■■□□□ 1.35
CBX4-203ENST00000494546 TMEM263Q8WUH6 116 aaKnown RBP23.5■■□□□ 1.35
CBX4-203ENST00000494546 TRAV12-3A0A0B4J271 114 aa23.49■■□□□ 1.35
CBX4-203ENST00000494546 TMEM88Q6PEY1 159 aa23.49■■□□□ 1.35
CBX4-203ENST00000494546 POM121L12Q8N7R1 296 aa23.49■■□□□ 1.35
CBX4-203ENST00000494546 RNASE8Q8TDE3 154 aaKnown RBP23.49■■□□□ 1.35
CBX4-203ENST00000494546 TIMM8BQ9Y5J9 83 aaPredicted RBP23.49■■□□□ 1.35
CBX4-203ENST00000494546 FAM122CQ6P4D5 195 aa23.48■■□□□ 1.35
CBX4-203ENST00000494546 CCDC28AQ8IWP9 274 aa23.48■■□□□ 1.35
CBX4-203ENST00000494546 RNF141Q8WVD5 230 aa23.48■■□□□ 1.35
CBX4-203ENST00000494546 FXYD5Q96DB9 178 aa23.48■■□□□ 1.35
CBX4-203ENST00000494546 OR7C2O60412 319 aa23.47■■□□□ 1.35
CBX4-203ENST00000494546 WFDC1Q9HC57 220 aa23.47■■□□□ 1.35
CBX4-203ENST00000494546 NOP10Q9NPE3 64 aaKnown RBP23.47■■□□□ 1.35
CBX4-203ENST00000494546 BIRC6Q9NR09 4857 aa23.46■■□□□ 1.35
CBX4-203ENST00000494546 LINC00477Q96M19 166 aa23.46■■□□□ 1.35
CBX4-203ENST00000494546 AGPAT4-IT1Q9H0P7 198 aa23.46■■□□□ 1.35
CBX4-203ENST00000494546 MED28Q9H204 178 aa23.46■■□□□ 1.35
CBX4-203ENST00000494546 IGKV2-40A0A087WW87 121 aaPredicted RBP23.45■■□□□ 1.34
CBX4-203ENST00000494546 IGKV2D-40P01614 121 aaPredicted RBP23.45■■□□□ 1.34
CBX4-203ENST00000494546 UBE2DNLQ8IWF7 75 aa23.44■■□□□ 1.34
CBX4-203ENST00000494546 PHYHIPLQ96FC7 376 aa23.44■■□□□ 1.34
CBX4-203ENST00000494546 F5H768 121 aa23.43■■□□□ 1.34
CBX4-203ENST00000494546 SLC25A5P05141 298 aaKnown RBP23.43■■□□□ 1.34
CBX4-203ENST00000494546 ZNF503Q96F45 646 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms