RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 CDC42P60953 191 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 YPEL3P61236 119 aaPredicted RBP0.59□□□□□ -2.31
ITGB1-216ENST00000493758 HIST1H3AP68431 136 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 H3F3AP84243 136 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 SRSF6Q13247 344 aaKnown RBP0.59□□□□□ -2.31
ITGB1-216ENST00000493758 IAH1Q2TAA2 248 aaPredicted RBP0.59□□□□□ -2.31
ITGB1-216ENST00000493758 KRTAP20-1Q3LI63 56 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 TEX36Q5VZQ5 186 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 LINC00311Q8N616 119 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 GDPD1Q8N9F7 314 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 MRPL57Q9BQC6 102 aaKnown RBP0.59□□□□□ -2.31
ITGB1-216ENST00000493758 DCSTAMPQ9H295 470 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 NHP2Q9NX24 153 aaKnown RBP0.59□□□□□ -2.31
ITGB1-216ENST00000493758 TAS2R4Q9NYW5 299 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 GLTPQ9NZD2 209 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 CYSLTR1Q9Y271 337 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 SLC35A3Q9Y2D2 325 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 PTPN23Q9H3S7 1636 aa0.59□□□□□ -2.32
ITGB1-216ENST00000493758 PXDNQ92626 1479 aa0.59□□□□□ -2.32
ITGB1-216ENST00000493758 PCDH15Q96QU1 1955 aa0.59□□□□□ -2.32
ITGB1-216ENST00000493758 TOP2AP11388 1531 aaKnown RBP0.59□□□□□ -2.32
ITGB1-216ENST00000493758 FAT3Q8TDW7 4589 aa0.59□□□□□ -2.32
ITGB1-216ENST00000493758 ABCA10Q8WWZ4 1543 aa0.59□□□□□ -2.32
ITGB1-216ENST00000493758 XRN1Q8IZH2 1706 aaKnown RBP0.58□□□□□ -2.32
ITGB1-216ENST00000493758 IFT172Q9UG01 1749 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 LRP1Q07954 4544 aaKnown RBP0.58□□□□□ -2.32
ITGB1-216ENST00000493758 FAT1Q14517 4588 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 CCDC144AA2RUR9 1427 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 CLIP1P30622 1438 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 hCG_1818297A0A087WSY0 165 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 A0A087WUJ7 227 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 A0A087WX48 190 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 TRAV1-1A0A0B4J248 108 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 SMIM9A6NGZ8 99 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 A8MT66 165 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 TMEM114B3SHH9 223 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 SULT1B1O43704 296 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 PDE6DO43924 150 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 HYPMO75409 117 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 OR2J2O76002 312 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 PROSCO94903 275 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 TCRBP04435 133 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 C8GP07360 202 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 RNASE3P12724 160 aaKnown RBP0.58□□□□□ -2.32
ITGB1-216ENST00000493758 AP3S2P59780 193 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 MYL6P60660 151 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 RAB4BP61018 213 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 LSM6P62312 80 aaKnown RBP0.58□□□□□ -2.32
ITGB1-216ENST00000493758 RANP62826 216 aaKnown RBP0.58□□□□□ -2.32
ITGB1-216ENST00000493758 TMEM97Q5BJF2 176 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 GPR146Q96CH1 333 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 C2orf50Q96LR7 162 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 ODF3Q96PU9 254 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 KLK9Q9UKQ9 250 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 SLC22A13Q9Y226 551 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 PRELID3BQ9Y3B1 194 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 ERVK-7P63135 1459 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 NLRP1Q9C000 1473 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 ZNF831Q5JPB2 1677 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 USH2AO75445 5202 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 ERICH3Q5RHP9 1530 aa0.58□□□□□ -2.32
ITGB1-216ENST00000493758 RTL1A6NKG5 1358 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 HEATR5AQ86XA9 2040 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 PPIP5K1Q6PFW1 1433 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 MDN1Q9NU22 5596 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 C5P01031 1676 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 ATP7BP35670 1465 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 A0A087X0T9 212 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 TRBV6-7A0A0A0MS04 114 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 C7orf71A4D174 169 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 C2orf70A6NJV1 201 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 C1orf196B1AJZ1 125 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 C19orf84I3L1E1 186 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 OR2T1O43869 369 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 OR1I1O60431 355 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 E2F6O75461 281 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 UBL3O95164 117 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 SERPINE1P05121 402 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 OR4E1P0C645 316 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 SMIM17P0DL12 118 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 MGST1P10620 155 aaKnown RBP0.57□□□□□ -2.32
ITGB1-216ENST00000493758 MIFP14174 115 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 ZNF93P35789 620 aaPredicted RBP0.57□□□□□ -2.32
ITGB1-216ENST00000493758 ANP32AP39687 249 aaKnown RBP0.57□□□□□ -2.32
ITGB1-216ENST00000493758 SSR2P43308 183 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 RHOBP62745 196 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 RHOGP84095 191 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 C12orf74Q32Q52 190 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 AKIRIN2Q53H80 203 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 RNASE10Q5GAN6 216 aaKnown RBP0.57□□□□□ -2.32
ITGB1-216ENST00000493758 OR51A2Q8NGJ7 313 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 OR8D4Q8NGM9 314 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 OR13D1Q8NGV5 346 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 FAM172AQ8WUF8 416 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 SFT2D1Q8WV19 159 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 BTF3L4Q96K17 158 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 KIFC1Q9BW19 673 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 UCK1Q9HA47 277 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 UQCC1Q9NVA1 299 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 C14orf105Q9NVL8 296 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms