RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 SLC50A1Q9BRV3 221 aa9.34□□□□□ -0.91
SAMM50-204ENST00000493161 SLIRPQ9GZT3 109 aaKnown RBP9.34□□□□□ -0.91
SAMM50-204ENST00000493161 GSN-AS1Q9NRJ2 163 aa9.34□□□□□ -0.91
SAMM50-204ENST00000493161 TRGV2A0A075B6R0 118 aa9.33□□□□□ -0.92
SAMM50-204ENST00000493161 K7EPK0 472 aa9.33□□□□□ -0.92
SAMM50-204ENST00000493161 IGLC2P0DOY2 106 aa9.33□□□□□ -0.92
SAMM50-204ENST00000493161 FAUP35544 74 aaKnown RBP9.33□□□□□ -0.92
SAMM50-204ENST00000493161 ERVFC1-1P60608 527 aa9.33□□□□□ -0.92
SAMM50-204ENST00000493161 HAMPP81172 84 aa9.33□□□□□ -0.92
SAMM50-204ENST00000493161 OPCMLQ14982 345 aa9.33□□□□□ -0.92
SAMM50-204ENST00000493161 TEPPQ6URK8 271 aa9.33□□□□□ -0.92
SAMM50-204ENST00000493161 TMEM14EPQ6UXP3 125 aa9.33□□□□□ -0.92
SAMM50-204ENST00000493161 TOMM5Q8N4H5 51 aa9.33□□□□□ -0.92
SAMM50-204ENST00000493161 C11orf72Q8NBR9 251 aa9.33□□□□□ -0.92
SAMM50-204ENST00000493161 MCFD2Q8NI22 146 aa9.33□□□□□ -0.92
SAMM50-204ENST00000493161 TMEM37Q8WXS4 190 aa9.33□□□□□ -0.92
SAMM50-204ENST00000493161 SMIM8Q96KF7 97 aa9.33□□□□□ -0.92
SAMM50-204ENST00000493161 NPVFQ9HCQ7 196 aa9.33□□□□□ -0.92
SAMM50-204ENST00000493161 TRAV5A0A0B4J249 113 aa9.32□□□□□ -0.92
SAMM50-204ENST00000493161 NPIPB6E9PJ23 425 aa9.32□□□□□ -0.92
SAMM50-204ENST00000493161 AGPAT2O15120 278 aa9.32□□□□□ -0.92
SAMM50-204ENST00000493161 CDPF1Q6NVV7 123 aa9.32□□□□□ -0.92
SAMM50-204ENST00000493161 BPIFA4PQ86YQ2 179 aa9.32□□□□□ -0.92
SAMM50-204ENST00000493161 FRZBQ92765 325 aa9.32□□□□□ -0.92
SAMM50-204ENST00000493161 SLC25A21Q9BQT8 299 aaPredicted RBP9.32□□□□□ -0.92
SAMM50-204ENST00000493161 PYGO2Q9BRQ0 406 aa9.32□□□□□ -0.92
SAMM50-204ENST00000493161 FUT9Q9Y231 359 aa9.32□□□□□ -0.92
SAMM50-204ENST00000493161 KLF12Q9Y4X4 402 aa9.32□□□□□ -0.92
SAMM50-204ENST00000493161 A0A087WTM6 91 aa9.31□□□□□ -0.92
SAMM50-204ENST00000493161 TRGV1A0A0A0MS02 117 aa9.31□□□□□ -0.92
SAMM50-204ENST00000493161 C9orf170A2RU37 121 aa9.31□□□□□ -0.92
SAMM50-204ENST00000493161 GOSR2O14653 212 aa9.31□□□□□ -0.92
SAMM50-204ENST00000493161 EREGO14944 169 aa9.31□□□□□ -0.92
SAMM50-204ENST00000493161 IGHV3-53P01767 116 aa9.31□□□□□ -0.92
SAMM50-204ENST00000493161 LEPP41159 167 aa9.31□□□□□ -0.92
SAMM50-204ENST00000493161 ERCC8Q13216 396 aa9.31□□□□□ -0.92
SAMM50-204ENST00000493161 PYDC2Q56P42 97 aa9.31□□□□□ -0.92
SAMM50-204ENST00000493161 S100A7AQ86SG5 101 aa9.31□□□□□ -0.92
SAMM50-204ENST00000493161 MGST2Q99735 147 aa9.31□□□□□ -0.92
SAMM50-204ENST00000493161 MRPS26Q9BYN8 205 aaKnown RBP9.31□□□□□ -0.92
SAMM50-204ENST00000493161 PTTG2Q9NZH5 202 aa9.31□□□□□ -0.92
SAMM50-204ENST00000493161 V9GYH0 126 aa9.31□□□□□ -0.92
SAMM50-204ENST00000493161 SRRM2Q9UQ35 2752 aaKnown RBP9.31□□□□□ -0.92
SAMM50-204ENST00000493161 VPS13BQ7Z7G8 4022 aa9.31□□□□□ -0.92
SAMM50-204ENST00000493161 FLG2Q5D862 2391 aaPredicted RBP9.3□□□□□ -0.92
SAMM50-204ENST00000493161 FNDC10F2Z333 226 aa9.3□□□□□ -0.92
SAMM50-204ENST00000493161 COX7A2P2O60397 106 aa9.3□□□□□ -0.92
SAMM50-204ENST00000493161 ZNF324O75467 553 aaPredicted RBP9.3□□□□□ -0.92
SAMM50-204ENST00000493161 AP3S2P59780 193 aa9.3□□□□□ -0.92
SAMM50-204ENST00000493161 CD300CQ08708 224 aa9.3□□□□□ -0.92
SAMM50-204ENST00000493161 PXDC1Q5TGL8 231 aa9.3□□□□□ -0.92
SAMM50-204ENST00000493161 Q6ZQT7 251 aa9.3□□□□□ -0.92
SAMM50-204ENST00000493161 ZNF546Q86UE3 836 aa9.3□□□□□ -0.92
SAMM50-204ENST00000493161 OR10P1Q8NGE3 313 aa9.3□□□□□ -0.92
SAMM50-204ENST00000493161 RAB2BQ8WUD1 216 aa9.3□□□□□ -0.92
SAMM50-204ENST00000493161 C18orf15Q96N68 181 aa9.3□□□□□ -0.92
SAMM50-204ENST00000493161 ODF3Q96PU9 254 aa9.3□□□□□ -0.92
SAMM50-204ENST00000493161 MGAT4CQ9UBM8 478 aa9.3□□□□□ -0.92
SAMM50-204ENST00000493161 PXMP4Q9Y6I8 212 aa9.3□□□□□ -0.92
SAMM50-204ENST00000493161 M0R3E3 92 aa9.29□□□□□ -0.92
SAMM50-204ENST00000493161 PAX4O43316 350 aa9.29□□□□□ -0.92
SAMM50-204ENST00000493161 SPINK4O60575 86 aa9.29□□□□□ -0.92
SAMM50-204ENST00000493161 SCGB1D2O95969 90 aa9.29□□□□□ -0.92
SAMM50-204ENST00000493161 TMBIM6P55061 237 aa9.29□□□□□ -0.92
SAMM50-204ENST00000493161 BTN1A1Q13410 526 aa9.29□□□□□ -0.92
SAMM50-204ENST00000493161 ICAM4Q14773 271 aa9.29□□□□□ -0.92
SAMM50-204ENST00000493161 C10orf113Q5VZT2 155 aa9.29□□□□□ -0.92
SAMM50-204ENST00000493161 LYPD5Q6UWN5 251 aa9.29□□□□□ -0.92
SAMM50-204ENST00000493161 TP53TG3Q9ULZ0 132 aa9.29□□□□□ -0.92
SAMM50-204ENST00000493161 FLVCR2Q9UPI3 526 aa9.29□□□□□ -0.92
SAMM50-204ENST00000493161 ICOSQ9Y6W8 199 aa9.29□□□□□ -0.92
SAMM50-204ENST00000493161 C7orf71A4D174 169 aa9.28□□□□□ -0.92
SAMM50-204ENST00000493161 H3BMQ9 156 aa9.28□□□□□ -0.92
SAMM50-204ENST00000493161 IFNA5P01569 189 aa9.28□□□□□ -0.92
SAMM50-204ENST00000493161 MRPL16Q9NX20 251 aaKnown RBP9.28□□□□□ -0.92
SAMM50-204ENST00000493161 RNF24Q9Y225 148 aa9.28□□□□□ -0.92
SAMM50-204ENST00000493161 RCL1Q9Y2P8 373 aaKnown RBP9.28□□□□□ -0.92
SAMM50-204ENST00000493161 KLLNB2CW77 178 aa9.27□□□□□ -0.93
SAMM50-204ENST00000493161 SLC25A5P05141 298 aaKnown RBP9.27□□□□□ -0.93
SAMM50-204ENST00000493161 RNASE4P34096 147 aaKnown RBP9.27□□□□□ -0.93
SAMM50-204ENST00000493161 TCL1AP56279 114 aa9.27□□□□□ -0.93
SAMM50-204ENST00000493161 ANXA2RQ3ZCQ2 193 aa9.27□□□□□ -0.93
SAMM50-204ENST00000493161 C4orf46Q504U0 113 aa9.27□□□□□ -0.93
SAMM50-204ENST00000493161 MIC13Q5XKP0 118 aa9.27□□□□□ -0.93
SAMM50-204ENST00000493161 EIF4E3Q8N5X7 224 aaKnown RBP9.27□□□□□ -0.93
SAMM50-204ENST00000493161 ZNF680Q8NEM1 530 aa9.27□□□□□ -0.93
SAMM50-204ENST00000493161 ST6GAL2Q96JF0 529 aa9.27□□□□□ -0.93
SAMM50-204ENST00000493161 FAM19A4Q96LR4 140 aa9.27□□□□□ -0.93
SAMM50-204ENST00000493161 C8orf49Q96NF6 230 aa9.27□□□□□ -0.93
SAMM50-204ENST00000493161 DNAJC4Q9NNZ3 241 aa9.27□□□□□ -0.93
SAMM50-204ENST00000493161 C7orf66A4D0T2 115 aa9.26□□□□□ -0.93
SAMM50-204ENST00000493161 PRAF2O60831 178 aa9.26□□□□□ -0.93
SAMM50-204ENST00000493161 TSC22D2O75157 780 aa9.26□□□□□ -0.93
SAMM50-204ENST00000493161 GCSHP23434 173 aa9.26□□□□□ -0.93
SAMM50-204ENST00000493161 CRYBA4P53673 196 aa9.26□□□□□ -0.93
SAMM50-204ENST00000493161 UBE2MP61081 183 aaKnown RBP9.26□□□□□ -0.93
SAMM50-204ENST00000493161 FHL2Q14192 279 aa9.26□□□□□ -0.93
SAMM50-204ENST00000493161 IAH1Q2TAA2 248 aaPredicted RBP9.26□□□□□ -0.93
SAMM50-204ENST00000493161 PRR9Q5T870 116 aa9.26□□□□□ -0.93
SAMM50-204ENST00000493161 NFE4Q86UQ8 179 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms