RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 TRAV5A0A0B4J249 113 aa16.84■□□□□ 0.29
CTDSP1-211ENST00000492545 ZNF705GA8MUZ8 300 aaPredicted RBP16.84■□□□□ 0.29
CTDSP1-211ENST00000492545 DAD1P61803 113 aa16.84■□□□□ 0.29
CTDSP1-211ENST00000492545 OR5C1Q8NGR4 320 aa16.84■□□□□ 0.29
CTDSP1-211ENST00000492545 SLC17A3O00476 420 aa16.83■□□□□ 0.28
CTDSP1-211ENST00000492545 SNRPCP09234 159 aaKnown RBP16.83■□□□□ 0.28
CTDSP1-211ENST00000492545 MRPL53Q96EL3 112 aaKnown RBP16.83■□□□□ 0.28
CTDSP1-211ENST00000492545 KCNIP2Q9NS61 270 aa16.83■□□□□ 0.28
CTDSP1-211ENST00000492545 OR5AC2Q9NZP5 309 aa16.83■□□□□ 0.28
CTDSP1-211ENST00000492545 PDE6HQ13956 83 aa16.82■□□□□ 0.28
CTDSP1-211ENST00000492545 LRRC37A5PQ49AS3 106 aa16.82■□□□□ 0.28
CTDSP1-211ENST00000492545 ODF3Q96PU9 254 aa16.82■□□□□ 0.28
CTDSP1-211ENST00000492545 ZNF586Q9NXT0 402 aa16.82■□□□□ 0.28
CTDSP1-211ENST00000492545 TRBV19A0A075B6N1 114 aa16.81■□□□□ 0.28
CTDSP1-211ENST00000492545 H0YIZ8 118 aa16.81■□□□□ 0.28
CTDSP1-211ENST00000492545 H3BTX0 84 aa16.81■□□□□ 0.28
CTDSP1-211ENST00000492545 H7BYZ3 331 aa16.81■□□□□ 0.28
CTDSP1-211ENST00000492545 SSNA1O43805 119 aa16.81■□□□□ 0.28
CTDSP1-211ENST00000492545 PET100P0DJ07 73 aa16.81■□□□□ 0.28
CTDSP1-211ENST00000492545 HIST1H1EP10412 219 aaKnown RBP16.81■□□□□ 0.28
CTDSP1-211ENST00000492545 H2BFSP57053 126 aa16.81■□□□□ 0.28
CTDSP1-211ENST00000492545 ZNF493Q6ZR52 646 aa16.81■□□□□ 0.28
CTDSP1-211ENST00000492545 POM121L12Q8N7R1 296 aa16.81■□□□□ 0.28
CTDSP1-211ENST00000492545 PLA2G2EQ9NZK7 142 aa16.81■□□□□ 0.28
CTDSP1-211ENST00000492545 PRELID1Q9Y255 219 aa16.81■□□□□ 0.28
CTDSP1-211ENST00000492545 PPP1R1CQ8WVI7 109 aa16.8■□□□□ 0.28
CTDSP1-211ENST00000492545 C16orf74Q96GX8 76 aa16.8■□□□□ 0.28
CTDSP1-211ENST00000492545 PRAC2D3DTV9 90 aa16.79■□□□□ 0.28
CTDSP1-211ENST00000492545 THAP6Q8TBB0 222 aa16.79■□□□□ 0.28
CTDSP1-211ENST00000492545 TIMM9Q9Y5J7 89 aa16.79■□□□□ 0.28
CTDSP1-211ENST00000492545 PRM2P04554 102 aa16.78■□□□□ 0.28
CTDSP1-211ENST00000492545 HTN3P15516 51 aa16.78■□□□□ 0.28
CTDSP1-211ENST00000492545 AZU1P20160 251 aa16.78■□□□□ 0.28
CTDSP1-211ENST00000492545 CLINT1Q14677 625 aa16.78■□□□□ 0.28
CTDSP1-211ENST00000492545 WDR61Q9GZS3 305 aaKnown RBP16.78■□□□□ 0.28
CTDSP1-211ENST00000492545 PLAC8L1A1L4L8 177 aa16.77■□□□□ 0.28
CTDSP1-211ENST00000492545 NPIPB6E9PJ23 425 aa16.77■□□□□ 0.28
CTDSP1-211ENST00000492545 C17orf112F2Z3M2 114 aa16.77■□□□□ 0.28
CTDSP1-211ENST00000492545 LEPP41159 167 aa16.77■□□□□ 0.28
CTDSP1-211ENST00000492545 TIMM8BQ9Y5J9 83 aaPredicted RBP16.77■□□□□ 0.28
CTDSP1-211ENST00000492545 MPC2O95563 127 aa16.76■□□□□ 0.27
CTDSP1-211ENST00000492545 TMEM263Q8WUH6 116 aaKnown RBP16.76■□□□□ 0.27
CTDSP1-211ENST00000492545 MRPL32Q9BYC8 188 aaKnown RBP16.76■□□□□ 0.27
CTDSP1-211ENST00000492545 NDUFB4O95168 129 aa16.75■□□□□ 0.27
CTDSP1-211ENST00000492545 CT45A10P0DMU9 189 aa16.75■□□□□ 0.27
CTDSP1-211ENST00000492545 HTN1P15515 57 aa16.75■□□□□ 0.27
CTDSP1-211ENST00000492545 GCSAMLQ5JQS6 135 aa16.75■□□□□ 0.27
CTDSP1-211ENST00000492545 CCDC28AQ8IWP9 274 aa16.75■□□□□ 0.27
CTDSP1-211ENST00000492545 C15orf53Q8NAA6 179 aa16.75■□□□□ 0.27
CTDSP1-211ENST00000492545 ATP5SQ99766 215 aa16.75■□□□□ 0.27
CTDSP1-211ENST00000492545 AAMDCQ9H7C9 122 aa16.75■□□□□ 0.27
CTDSP1-211ENST00000492545 CBY3A6NI87 242 aa16.74■□□□□ 0.27
CTDSP1-211ENST00000492545 DEFB130BP0DP73 79 aa16.74■□□□□ 0.27
CTDSP1-211ENST00000492545 DEFB130AP0DP74 79 aa16.74■□□□□ 0.27
CTDSP1-211ENST00000492545 RNF212Q495C1 297 aa16.74■□□□□ 0.27
CTDSP1-211ENST00000492545 GFI1BQ5VTD9 330 aa16.74■□□□□ 0.27
CTDSP1-211ENST00000492545 RNASE8Q8TDE3 154 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-211ENST00000492545 LINC00477Q96M19 166 aa16.74■□□□□ 0.27
CTDSP1-211ENST00000492545 SLC25A2Q9BXI2 301 aa16.74■□□□□ 0.27
CTDSP1-211ENST00000492545 PYYP10082 97 aa16.73■□□□□ 0.27
CTDSP1-211ENST00000492545 PRB4P10163 310 aaPredicted RBP16.73■□□□□ 0.27
CTDSP1-211ENST00000492545 TMEM88Q6PEY1 159 aa16.73■□□□□ 0.27
CTDSP1-211ENST00000492545 FAM167A-AS1Q96KT0 104 aa16.73■□□□□ 0.27
CTDSP1-211ENST00000492545 HSPB11Q9Y547 144 aa16.73■□□□□ 0.27
CTDSP1-211ENST00000492545 DNAH6Q9C0G6 4158 aa16.73■□□□□ 0.27
CTDSP1-211ENST00000492545 FRAS1Q86XX4 4008 aa16.72■□□□□ 0.27
CTDSP1-211ENST00000492545 NBEAP1P0C6P0 100 aa16.72■□□□□ 0.27
CTDSP1-211ENST00000492545 MIR17HGQ75NE6 70 aa16.72■□□□□ 0.27
CTDSP1-211ENST00000492545 SCGB1C1Q8TD33 95 aa16.72■□□□□ 0.27
CTDSP1-211ENST00000492545 BLNKQ8WV28 456 aa16.72■□□□□ 0.27
CTDSP1-211ENST00000492545 OR51M1Q9H341 326 aa16.72■□□□□ 0.27
CTDSP1-211ENST00000492545 DNAH10Q8IVF4 4471 aa16.71■□□□□ 0.27
CTDSP1-211ENST00000492545 M0R3E3 92 aa16.71■□□□□ 0.27
CTDSP1-211ENST00000492545 IFNA5P01569 189 aa16.71■□□□□ 0.27
CTDSP1-211ENST00000492545 SLC25A5P05141 298 aaKnown RBP16.71■□□□□ 0.27
CTDSP1-211ENST00000492545 ATP5G1P05496 136 aa16.71■□□□□ 0.27
CTDSP1-211ENST00000492545 RPL12P30050 165 aaKnown RBP16.71■□□□□ 0.27
CTDSP1-211ENST00000492545 ATP5G3P48201 142 aa16.71■□□□□ 0.27
CTDSP1-211ENST00000492545 KIR3DS1Q14943 382 aa16.71■□□□□ 0.27
CTDSP1-211ENST00000492545 PYGO2Q9BRQ0 406 aa16.71■□□□□ 0.27
CTDSP1-211ENST00000492545 PARD6GQ9BYG4 376 aaPredicted RBP16.71■□□□□ 0.27
CTDSP1-211ENST00000492545 FUT9Q9Y231 359 aa16.71■□□□□ 0.27
CTDSP1-211ENST00000492545 NMBP08949 121 aa16.7■□□□□ 0.26
CTDSP1-211ENST00000492545 FCN2Q15485 313 aa16.7■□□□□ 0.26
CTDSP1-211ENST00000492545 UBE2DNLQ8IWF7 75 aa16.7■□□□□ 0.26
CTDSP1-211ENST00000492545 PAXXQ9BUH6 204 aa16.7■□□□□ 0.26
CTDSP1-211ENST00000492545 C9orf47Q6ZRZ4 202 aa16.69■□□□□ 0.26
CTDSP1-211ENST00000492545 EXOC3-AS1Q8N2X6 119 aa16.69■□□□□ 0.26
CTDSP1-211ENST00000492545 NOP10Q9NPE3 64 aaKnown RBP16.69■□□□□ 0.26
CTDSP1-211ENST00000492545 F5H768 121 aa16.68■□□□□ 0.26
CTDSP1-211ENST00000492545 FAM3BP58499 235 aaPredicted RBP16.68■□□□□ 0.26
CTDSP1-211ENST00000492545 ICAM4Q14773 271 aa16.68■□□□□ 0.26
CTDSP1-211ENST00000492545 LGALS9BQ3B8N2 356 aa16.68■□□□□ 0.26
CTDSP1-211ENST00000492545 LINC00336Q6ZUF6 198 aa16.68■□□□□ 0.26
CTDSP1-211ENST00000492545 RNF141Q8WVD5 230 aa16.68■□□□□ 0.26
CTDSP1-211ENST00000492545 FXYD5Q96DB9 178 aa16.68■□□□□ 0.26
CTDSP1-211ENST00000492545 FAM19A4Q96LR4 140 aa16.68■□□□□ 0.26
CTDSP1-211ENST00000492545 AGPAT4-IT1Q9H0P7 198 aa16.68■□□□□ 0.26
CTDSP1-211ENST00000492545 MBD2Q9UBB5 411 aa16.68■□□□□ 0.26
CTDSP1-211ENST00000492545 TRAV12-3A0A0B4J271 114 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms