RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 J3KRW8 73 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 SLC17A3O00476 420 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 OR7C2O60412 319 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 MPC2O95563 127 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 P0DMU3 169 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 FAM231AP0DMU4 169 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 FAM231CP0DMU5 169 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 IGLC2P0DOY2 106 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 HIST1H1EP10412 219 aaKnown RBP6.55□□□□□ -1.36
HDAC6-232ENST00000489053 RPL12P30050 165 aaKnown RBP6.55□□□□□ -1.36
HDAC6-232ENST00000489053 TAS2R60P59551 318 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 PDE6HQ13956 83 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 AMTNQ6UX39 209 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 C1orf158Q8N1D5 194 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 RPP25LQ8N5L8 163 aaKnown RBP6.55□□□□□ -1.36
HDAC6-232ENST00000489053 CHAC2Q8WUX2 184 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 C16orf74Q96GX8 76 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 MRPL32Q9BYC8 188 aaKnown RBP6.55□□□□□ -1.36
HDAC6-232ENST00000489053 SMIM3Q9BZL3 60 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 DKK2Q9UBU2 259 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 PRELID1Q9Y255 219 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 TRBV19A0A075B6N1 114 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 H3BQ15 152 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 MRPS12O15235 138 aaKnown RBP6.54□□□□□ -1.36
HDAC6-232ENST00000489053 ZNF253O75346 499 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 PTTG1O95997 202 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 DEFB130BP0DP73 79 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 DEFB130AP0DP74 79 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 PRB4P10163 310 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-232ENST00000489053 CSN1S1P47710 185 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 H2BFSP57053 126 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 TAS2R45P59539 299 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 OXA1LQ15070 435 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 FFAR4Q5NUL3 377 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 TMEM78Q5T7P6 136 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 MORN5Q5VZ52 161 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 ZNF493Q6ZR52 646 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 FAM210BQ96KR6 192 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 WDR61Q9GZS3 305 aaKnown RBP6.54□□□□□ -1.36
HDAC6-232ENST00000489053 MED28Q9H204 178 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 TMEM14CQ9P0S9 112 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 MBD2Q9UBB5 411 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 APLNQ9ULZ1 77 aa6.54□□□□□ -1.36
HDAC6-232ENST00000489053 A8MTW9 85 aa6.53□□□□□ -1.36
HDAC6-232ENST00000489053 SNURFLB1AK76 121 aa6.53□□□□□ -1.36
HDAC6-232ENST00000489053 PYYP10082 97 aa6.53□□□□□ -1.36
HDAC6-232ENST00000489053 UBE2L3P68036 154 aaKnown RBP6.53□□□□□ -1.36
HDAC6-232ENST00000489053 KHDC3LQ587J8 217 aa6.53□□□□□ -1.36
HDAC6-232ENST00000489053 MRPL53Q96EL3 112 aaKnown RBP6.53□□□□□ -1.36
HDAC6-232ENST00000489053 C20orf144Q9BQM9 153 aa6.53□□□□□ -1.36
HDAC6-232ENST00000489053 PAXXQ9BUH6 204 aa6.53□□□□□ -1.36
HDAC6-232ENST00000489053 OR51M1Q9H341 326 aa6.53□□□□□ -1.36
HDAC6-232ENST00000489053 ZNF586Q9NXT0 402 aa6.53□□□□□ -1.36
HDAC6-232ENST00000489053 FUT9Q9Y231 359 aa6.53□□□□□ -1.36
HDAC6-232ENST00000489053 HSPB11Q9Y547 144 aa6.53□□□□□ -1.36
HDAC6-232ENST00000489053 ALG5Q9Y673 324 aa6.53□□□□□ -1.36
HDAC6-232ENST00000489053 TRAV12-3A0A0B4J271 114 aa6.52□□□□□ -1.37
HDAC6-232ENST00000489053 A0A1W2PPV4 95 aa6.52□□□□□ -1.37
HDAC6-232ENST00000489053 PRAC2D3DTV9 90 aa6.52□□□□□ -1.37
HDAC6-232ENST00000489053 H0YIZ8 118 aa6.52□□□□□ -1.37
HDAC6-232ENST00000489053 CRXO43186 299 aaPredicted RBP6.52□□□□□ -1.37
HDAC6-232ENST00000489053 OR10J4P0C629 311 aa6.52□□□□□ -1.37
HDAC6-232ENST00000489053 ICAM4Q14773 271 aa6.52□□□□□ -1.37
HDAC6-232ENST00000489053 GCSAMLQ5JQS6 135 aa6.52□□□□□ -1.37
HDAC6-232ENST00000489053 FAM74A1Q5RGS3 127 aa6.52□□□□□ -1.37
HDAC6-232ENST00000489053 FAM122CQ6P4D5 195 aa6.52□□□□□ -1.37
HDAC6-232ENST00000489053 MIR17HGQ75NE6 70 aa6.52□□□□□ -1.37
HDAC6-232ENST00000489053 ATG101Q9BSB4 218 aa6.52□□□□□ -1.37
HDAC6-232ENST00000489053 TIMM8BQ9Y5J9 83 aaPredicted RBP6.52□□□□□ -1.37
HDAC6-232ENST00000489053 VPS13DQ5THJ4 4388 aa6.51□□□□□ -1.37
HDAC6-232ENST00000489053 NPIPB6E9PJ23 425 aa6.51□□□□□ -1.37
HDAC6-232ENST00000489053 F5H768 121 aa6.51□□□□□ -1.37
HDAC6-232ENST00000489053 M0R3E3 92 aa6.51□□□□□ -1.37
HDAC6-232ENST00000489053 SLC25A5P05141 298 aaKnown RBP6.51□□□□□ -1.37
HDAC6-232ENST00000489053 ATP5G1P05496 136 aa6.51□□□□□ -1.37
HDAC6-232ENST00000489053 GPX1P07203 203 aa6.51□□□□□ -1.37
HDAC6-232ENST00000489053 NBEAP1P0C6P0 100 aa6.51□□□□□ -1.37
HDAC6-232ENST00000489053 ATP5G3P48201 142 aa6.51□□□□□ -1.37
HDAC6-232ENST00000489053 ACOT6Q3I5F7 207 aaPredicted RBP6.51□□□□□ -1.37
HDAC6-232ENST00000489053 GFI1BQ5VTD9 330 aa6.51□□□□□ -1.37
HDAC6-232ENST00000489053 EXOC3-AS1Q8N2X6 119 aa6.51□□□□□ -1.37
HDAC6-232ENST00000489053 C15orf53Q8NAA6 179 aa6.51□□□□□ -1.37
HDAC6-232ENST00000489053 INO80EQ8NBZ0 244 aaPredicted RBP6.51□□□□□ -1.37
HDAC6-232ENST00000489053 CMTM2Q8TAZ6 248 aa6.51□□□□□ -1.37
HDAC6-232ENST00000489053 TMEM263Q8WUH6 116 aaKnown RBP6.51□□□□□ -1.37
HDAC6-232ENST00000489053 RNF141Q8WVD5 230 aa6.51□□□□□ -1.37
HDAC6-232ENST00000489053 SAT2Q96F10 170 aaPredicted RBP6.51□□□□□ -1.37
HDAC6-232ENST00000489053 LINC00477Q96M19 166 aa6.51□□□□□ -1.37
HDAC6-232ENST00000489053 ODF3Q96PU9 254 aa6.51□□□□□ -1.37
HDAC6-232ENST00000489053 SLC25A2Q9BXI2 301 aa6.51□□□□□ -1.37
HDAC6-232ENST00000489053 PARD6GQ9BYG4 376 aaPredicted RBP6.51□□□□□ -1.37
HDAC6-232ENST00000489053 NOP10Q9NPE3 64 aaKnown RBP6.51□□□□□ -1.37
HDAC6-232ENST00000489053 PLA2G2EQ9NZK7 142 aa6.51□□□□□ -1.37
HDAC6-232ENST00000489053 CBY3A6NI87 242 aa6.5□□□□□ -1.37
HDAC6-232ENST00000489053 PRM2P04554 102 aa6.5□□□□□ -1.37
HDAC6-232ENST00000489053 CT45A10P0DMU9 189 aa6.5□□□□□ -1.37
HDAC6-232ENST00000489053 RNASE4P34096 147 aaKnown RBP6.5□□□□□ -1.37
HDAC6-232ENST00000489053 RANP62826 216 aaKnown RBP6.5□□□□□ -1.37
HDAC6-232ENST00000489053 ERCC8Q13216 396 aa6.5□□□□□ -1.37
HDAC6-232ENST00000489053 ZNF266Q14584 549 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms