RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 TAL2Q16559 108 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 CLEC12BQ2HXU8 276 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 Q56UQ5 140 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 TMEM215Q68D42 235 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 HMGN2P46Q86SG4 172 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 ZNF547Q8IVP9 402 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 TMEM251Q8N6I4 163 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 TEX29Q8N6K0 151 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 OR8B12Q8NGG6 310 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 OR10G6Q8NH81 332 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 NT5CQ8TCD5 201 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 ARPC1AQ92747 370 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 ADAT3Q96EY9 351 aaPredicted RBP2.54□□□□□ -2
ECHDC1-217ENST00000488087 TIMM29Q9BSF4 260 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 TMEM147Q9BVK8 224 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 AICDAQ9GZX7 198 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 MAP1LC3AQ9H492 121 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 VSIRQ9H7M9 311 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 ZNF331Q9NQX6 463 aaPredicted RBP2.54□□□□□ -2
ECHDC1-217ENST00000488087 LHFPL6Q9Y693 200 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 HEATR5AQ86XA9 2040 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 TMEM131Q92545 1883 aa2.54□□□□□ -2
ECHDC1-217ENST00000488087 PHF3Q92576 2039 aaKnown RBP2.53□□□□□ -2
ECHDC1-217ENST00000488087 ATG2AQ2TAZ0 1938 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 TICRRQ7Z2Z1 1910 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 IGHV1-24A0A0C4DH33 117 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 A0A1W2PRE2 83 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 RBMY1BA6NDE4 496 aaKnown RBP2.53□□□□□ -2
ECHDC1-217ENST00000488087 A6NDX4 124 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 RBMY1EA6NEQ0 496 aaKnown RBP2.53□□□□□ -2
ECHDC1-217ENST00000488087 SMIM9A6NGZ8 99 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 C21orf140B9A014 251 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 C12orf77C9JDV5 145 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 KRTAP4-16G5E9R7 235 aaPredicted RBP2.53□□□□□ -2
ECHDC1-217ENST00000488087 SLC31A1O15431 190 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 SYNGR2O43760 224 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 SLC16A7O60669 478 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 LEPROTL1O95214 131 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 UTS2O95399 124 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 CXorf1O96002 111 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 NAPSAO96009 420 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 MOSP00540 346 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 PPYP01298 95 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 RBMY1DP0C7P1 496 aaKnown RBP2.53□□□□□ -2
ECHDC1-217ENST00000488087 RBMY1A1P0DJD3 496 aaKnown RBP2.53□□□□□ -2
ECHDC1-217ENST00000488087 CPMP14384 443 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 GABRG2P18507 467 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 G6PCP35575 357 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 MPV17P39210 176 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 OPRK1P41145 380 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 FABP6P51161 128 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 FBXW4P57775 412 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 ZNF121P58317 390 aaPredicted RBP2.53□□□□□ -2
ECHDC1-217ENST00000488087 RPS24P62847 133 aaKnown RBP2.53□□□□□ -2
ECHDC1-217ENST00000488087 RPL18Q07020 188 aaKnown RBP2.53□□□□□ -2
ECHDC1-217ENST00000488087 CEACAM16Q2WEN9 425 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 LGALS9BQ3B8N2 356 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 SP6Q3SY56 376 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 LGALS9CQ6DKI2 356 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 OOSP2Q86WS3 158 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 SBSPONQ8IVN8 264 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 ATOH7Q8N100 152 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 Q8N9W7 124 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 VN1R2Q8NFZ6 395 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 ZNRF2Q8NHG8 242 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 LMX1AQ8TE12 382 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 LRRC29Q8WV35 223 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 OR4C12Q96R67 309 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 PBOV1Q9GZY1 135 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 DEFB127Q9H1M4 99 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 FAM60AQ9NP50 221 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 CALYQ9NYX4 217 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 YTHDF2Q9Y5A9 579 aaKnown RBP2.53□□□□□ -2
ECHDC1-217ENST00000488087 HEBP2Q9Y5Z4 205 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 KMT2EQ8IZD2 1858 aa2.53□□□□□ -2
ECHDC1-217ENST00000488087 TRAV36DV7A0A075B6V5 113 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 TRBV6-6A0A0A6YYG2 114 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 A0A1B0GXF2 115 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 ZNF850A8MQ14 1090 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 FNDC10F2Z333 226 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 K7EMT4 169 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 PDCD6O75340 191 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 DHRS3O75911 302 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 APOA2P02652 100 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 MT-ATP8P03928 68 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 C8orf88P0DMB2 117 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 IFITM1P13164 125 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 ZNF823P16415 610 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 NTF3P20783 257 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 TAS2R45P59539 299 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 RPL31P62899 125 aaKnown RBP2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 SLC38A11Q08AI6 406 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 CATR1Q13166 79 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 WFDC2Q14508 124 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 KIAA0087Q14695 138 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 KISS1Q15726 138 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 RTL8BQ17RB0 113 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 DUX4L9Q6RFH8 374 aaPredicted RBP2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 CAMK2N1Q7Z7J9 78 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 FAM19A2Q8N3H0 131 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms