RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 NIPSNAP3BQ9BS92 247 aa8.16□□□□□ -1.1
SPEN-205ENST00000487496 NPCDR1Q9BY65 106 aa8.16□□□□□ -1.1
SPEN-205ENST00000487496 SSNA1O43805 119 aa8.15□□□□□ -1.1
SPEN-205ENST00000487496 CDKN1BP46527 198 aa8.15□□□□□ -1.1
SPEN-205ENST00000487496 CLINT1Q14677 625 aa8.15□□□□□ -1.1
SPEN-205ENST00000487496 OXA1LQ15070 435 aa8.15□□□□□ -1.1
SPEN-205ENST00000487496 C4orf48Q5BLP8 95 aa8.15□□□□□ -1.1
SPEN-205ENST00000487496 GCSAMLQ5JQS6 135 aa8.15□□□□□ -1.1
SPEN-205ENST00000487496 THAP6Q8TBB0 222 aa8.15□□□□□ -1.1
SPEN-205ENST00000487496 ARPC5LQ9BPX5 153 aa8.15□□□□□ -1.1
SPEN-205ENST00000487496 ZNF586Q9NXT0 402 aa8.15□□□□□ -1.1
SPEN-205ENST00000487496 VPS13DQ5THJ4 4388 aa8.15□□□□□ -1.11
SPEN-205ENST00000487496 AZU1P20160 251 aa8.14□□□□□ -1.11
SPEN-205ENST00000487496 TSPOP30536 169 aa8.14□□□□□ -1.11
SPEN-205ENST00000487496 LCE2DQ5TA82 110 aaPredicted RBP8.14□□□□□ -1.11
SPEN-205ENST00000487496 OR10J6PQ8NGY7 276 aa8.14□□□□□ -1.11
SPEN-205ENST00000487496 LINC01587Q99440 93 aa8.14□□□□□ -1.11
SPEN-205ENST00000487496 NDUFAF3Q9BU61 184 aa8.14□□□□□ -1.11
SPEN-205ENST00000487496 WDR61Q9GZS3 305 aaKnown RBP8.14□□□□□ -1.11
SPEN-205ENST00000487496 TMEM14CQ9P0S9 112 aa8.14□□□□□ -1.11
SPEN-205ENST00000487496 TRBV19A0A075B6N1 114 aa8.13□□□□□ -1.11
SPEN-205ENST00000487496 PLAC8L1A1L4L8 177 aa8.13□□□□□ -1.11
SPEN-205ENST00000487496 ZNF253O75346 499 aa8.13□□□□□ -1.11
SPEN-205ENST00000487496 MPC2O95563 127 aa8.13□□□□□ -1.11
SPEN-205ENST00000487496 HIST1H1EP10412 219 aaKnown RBP8.13□□□□□ -1.11
SPEN-205ENST00000487496 TAS2R60P59551 318 aa8.13□□□□□ -1.11
SPEN-205ENST00000487496 DAD1P61803 113 aa8.13□□□□□ -1.11
SPEN-205ENST00000487496 KIR3DS1Q14943 382 aa8.13□□□□□ -1.11
SPEN-205ENST00000487496 TMEM256Q8N2U0 113 aa8.13□□□□□ -1.11
SPEN-205ENST00000487496 FAM210BQ96KR6 192 aa8.13□□□□□ -1.11
SPEN-205ENST00000487496 PARD6GQ9BYG4 376 aaPredicted RBP8.13□□□□□ -1.11
SPEN-205ENST00000487496 LYRM9A8MSI8 78 aa8.12□□□□□ -1.11
SPEN-205ENST00000487496 NDUFB4O95168 129 aa8.12□□□□□ -1.11
SPEN-205ENST00000487496 CT45A10P0DMU9 189 aa8.12□□□□□ -1.11
SPEN-205ENST00000487496 PYYP10082 97 aa8.12□□□□□ -1.11
SPEN-205ENST00000487496 HTN1P15515 57 aa8.12□□□□□ -1.11
SPEN-205ENST00000487496 HTN3P15516 51 aa8.12□□□□□ -1.11
SPEN-205ENST00000487496 FAM167A-AS1Q96KT0 104 aa8.12□□□□□ -1.11
SPEN-205ENST00000487496 SLC25A2Q9BXI2 301 aa8.12□□□□□ -1.11
SPEN-205ENST00000487496 BIRC6Q9NR09 4857 aa8.12□□□□□ -1.11
SPEN-205ENST00000487496 DNAH6Q9C0G6 4158 aa8.12□□□□□ -1.11
SPEN-205ENST00000487496 NPIPB6E9PJ23 425 aa8.11□□□□□ -1.11
SPEN-205ENST00000487496 H7BYZ3 331 aa8.11□□□□□ -1.11
SPEN-205ENST00000487496 M0R3E3 92 aa8.11□□□□□ -1.11
SPEN-205ENST00000487496 PET100P0DJ07 73 aa8.11□□□□□ -1.11
SPEN-205ENST00000487496 P0DMU3 169 aa8.11□□□□□ -1.11
SPEN-205ENST00000487496 FAM231AP0DMU4 169 aa8.11□□□□□ -1.11
SPEN-205ENST00000487496 FAM231CP0DMU5 169 aa8.11□□□□□ -1.11
SPEN-205ENST00000487496 RPL12P30050 165 aaKnown RBP8.11□□□□□ -1.11
SPEN-205ENST00000487496 PDE6HQ13956 83 aa8.11□□□□□ -1.11
SPEN-205ENST00000487496 GFI1BQ5VTD9 330 aa8.11□□□□□ -1.11
SPEN-205ENST00000487496 MIR17HGQ75NE6 70 aa8.11□□□□□ -1.11
SPEN-205ENST00000487496 MRPL53Q96EL3 112 aaKnown RBP8.11□□□□□ -1.11
SPEN-205ENST00000487496 ODF3Q96PU9 254 aa8.11□□□□□ -1.11
SPEN-205ENST00000487496 ATP5SQ99766 215 aa8.11□□□□□ -1.11
SPEN-205ENST00000487496 C20orf144Q9BQM9 153 aa8.11□□□□□ -1.11
SPEN-205ENST00000487496 KCNIP2Q9NS61 270 aa8.11□□□□□ -1.11
SPEN-205ENST00000487496 HSPB11Q9Y547 144 aa8.11□□□□□ -1.11
SPEN-205ENST00000487496 TIMM9Q9Y5J7 89 aa8.11□□□□□ -1.11
SPEN-205ENST00000487496 C17orf112F2Z3M2 114 aa8.1□□□□□ -1.11
SPEN-205ENST00000487496 DEFB130BP0DP73 79 aa8.1□□□□□ -1.11
SPEN-205ENST00000487496 DEFB130AP0DP74 79 aa8.1□□□□□ -1.11
SPEN-205ENST00000487496 FCN2Q15485 313 aa8.1□□□□□ -1.11
SPEN-205ENST00000487496 EXOC3-AS1Q8N2X6 119 aa8.1□□□□□ -1.11
SPEN-205ENST00000487496 POM121L12Q8N7R1 296 aa8.1□□□□□ -1.11
SPEN-205ENST00000487496 BLNKQ8WV28 456 aa8.1□□□□□ -1.11
SPEN-205ENST00000487496 C16orf74Q96GX8 76 aa8.1□□□□□ -1.11
SPEN-205ENST00000487496 MRPL32Q9BYC8 188 aaKnown RBP8.1□□□□□ -1.11
SPEN-205ENST00000487496 SMIM3Q9BZL3 60 aa8.1□□□□□ -1.11
SPEN-205ENST00000487496 MBD2Q9UBB5 411 aa8.1□□□□□ -1.11
SPEN-205ENST00000487496 PRELID1Q9Y255 219 aa8.1□□□□□ -1.11
SPEN-205ENST00000487496 ALG5Q9Y673 324 aa8.1□□□□□ -1.11
SPEN-205ENST00000487496 DNAH10Q8IVF4 4471 aa8.09□□□□□ -1.11
SPEN-205ENST00000487496 J3KRW8 73 aa8.09□□□□□ -1.11
SPEN-205ENST00000487496 NBEAP1P0C6P0 100 aa8.09□□□□□ -1.11
SPEN-205ENST00000487496 LEPP41159 167 aa8.09□□□□□ -1.11
SPEN-205ENST00000487496 ERCC8Q13216 396 aa8.09□□□□□ -1.11
SPEN-205ENST00000487496 TMEM88Q6PEY1 159 aa8.09□□□□□ -1.11
SPEN-205ENST00000487496 ZNF493Q6ZR52 646 aa8.09□□□□□ -1.11
SPEN-205ENST00000487496 SVIPQ8NHG7 77 aa8.09□□□□□ -1.11
SPEN-205ENST00000487496 RNASE8Q8TDE3 154 aaKnown RBP8.09□□□□□ -1.11
SPEN-205ENST00000487496 TMEM263Q8WUH6 116 aaKnown RBP8.09□□□□□ -1.11
SPEN-205ENST00000487496 FXYD5Q96DB9 178 aa8.09□□□□□ -1.11
SPEN-205ENST00000487496 LINC00477Q96M19 166 aa8.09□□□□□ -1.11
SPEN-205ENST00000487496 OR51M1Q9H341 326 aa8.09□□□□□ -1.11
SPEN-205ENST00000487496 AAMDCQ9H7C9 122 aa8.09□□□□□ -1.11
SPEN-205ENST00000487496 FUT9Q9Y231 359 aa8.09□□□□□ -1.11
SPEN-205ENST00000487496 TIMM8BQ9Y5J9 83 aaPredicted RBP8.09□□□□□ -1.11
SPEN-205ENST00000487496 FRAS1Q86XX4 4008 aa8.08□□□□□ -1.12
SPEN-205ENST00000487496 TRAV12-3A0A0B4J271 114 aa8.08□□□□□ -1.12
SPEN-205ENST00000487496 PTTG1O95997 202 aa8.08□□□□□ -1.12
SPEN-205ENST00000487496 IFNA5P01569 189 aa8.08□□□□□ -1.12
SPEN-205ENST00000487496 OR10J4P0C629 311 aa8.08□□□□□ -1.12
SPEN-205ENST00000487496 ICAM4Q14773 271 aa8.08□□□□□ -1.12
SPEN-205ENST00000487496 LINC01559Q495D7 138 aa8.08□□□□□ -1.12
SPEN-205ENST00000487496 SCGB1C1Q8TD33 95 aa8.08□□□□□ -1.12
SPEN-205ENST00000487496 RNF141Q8WVD5 230 aa8.08□□□□□ -1.12
SPEN-205ENST00000487496 FAM19A4Q96LR4 140 aa8.08□□□□□ -1.12
SPEN-205ENST00000487496 PAXXQ9BUH6 204 aa8.08□□□□□ -1.12
SPEN-205ENST00000487496 AGPAT4-IT1Q9H0P7 198 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms