RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 TCEAL7Q9BRU2 100 aa7.11□□□□□ -1.27
MCF2L-227ENST00000486806 NKX6-2Q9C056 277 aaPredicted RBP7.11□□□□□ -1.27
MCF2L-227ENST00000486806 ZMAT5Q9UDW3 170 aaKnown RBP7.11□□□□□ -1.27
MCF2L-227ENST00000486806 ZNF705FA8MVS1 300 aaPredicted RBP7.1□□□□□ -1.27
MCF2L-227ENST00000486806 OR11H12B2RN74 326 aa7.1□□□□□ -1.27
MCF2L-227ENST00000486806 C11orf94C9JXX5 98 aa7.1□□□□□ -1.27
MCF2L-227ENST00000486806 PRAC2D3DTV9 90 aa7.1□□□□□ -1.27
MCF2L-227ENST00000486806 DEFB1P60022 68 aa7.1□□□□□ -1.27
MCF2L-227ENST00000486806 SUMO1P63165 101 aaKnown RBP7.1□□□□□ -1.27
MCF2L-227ENST00000486806 GNG5P63218 68 aa7.1□□□□□ -1.27
MCF2L-227ENST00000486806 MEF2BQ02080 365 aaPredicted RBP7.1□□□□□ -1.27
MCF2L-227ENST00000486806 HAGHQ16775 308 aa7.1□□□□□ -1.27
MCF2L-227ENST00000486806 ZNF506Q5JVG8 444 aa7.1□□□□□ -1.27
MCF2L-227ENST00000486806 GDF5OSQ5U4N7 250 aa7.1□□□□□ -1.27
MCF2L-227ENST00000486806 FOXI2Q6ZQN5 318 aa7.1□□□□□ -1.27
MCF2L-227ENST00000486806 GTSCR1Q86UQ5 136 aa7.1□□□□□ -1.27
MCF2L-227ENST00000486806 Q8N1Y9 231 aa7.1□□□□□ -1.27
MCF2L-227ENST00000486806 ZNF738Q8NE65 137 aa7.1□□□□□ -1.27
MCF2L-227ENST00000486806 RPUSD4Q96CM3 377 aaKnown RBP7.1□□□□□ -1.27
MCF2L-227ENST00000486806 LINC00052Q96N35 136 aa7.1□□□□□ -1.27
MCF2L-227ENST00000486806 PRR25Q96S07 402 aa7.1□□□□□ -1.27
MCF2L-227ENST00000486806 TXNDC17Q9BRA2 123 aa7.1□□□□□ -1.27
MCF2L-227ENST00000486806 WFDC10AQ9H1F0 79 aa7.1□□□□□ -1.27
MCF2L-227ENST00000486806 SAV1Q9H4B6 383 aaPredicted RBP7.1□□□□□ -1.27
MCF2L-227ENST00000486806 VAX2Q9UIW0 290 aa7.1□□□□□ -1.27
MCF2L-227ENST00000486806 A0A0J9YX75 114 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 RBFOX3A6NFN3 312 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 A8MTW9 85 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 DIRC3C9JPN6 131 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 F6UB75 175 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 NDUFS6O75380 124 aaKnown RBP7.09□□□□□ -1.27
MCF2L-227ENST00000486806 TCRAP04437 139 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 SLC25A5P05141 298 aaKnown RBP7.09□□□□□ -1.27
MCF2L-227ENST00000486806 PRB4P10163 310 aaPredicted RBP7.09□□□□□ -1.27
MCF2L-227ENST00000486806 CMC4P56277 68 aaPredicted RBP7.09□□□□□ -1.27
MCF2L-227ENST00000486806 ZNF124Q15973 351 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 TOR2AQ5JU69 321 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 CST9LP1Q5W188 147 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 APRG1Q8IVJ8 170 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 CMTM2Q8TAZ6 248 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 RXFP4Q8TDU9 374 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 HIST1H2BAQ96A08 127 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 C11orf52Q96A22 123 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 CITED4Q96RK1 184 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 RARRES2Q99969 163 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 ATG101Q9BSB4 218 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 MED9Q9NWA0 146 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 EPDR1Q9UM22 224 aa7.09□□□□□ -1.27
MCF2L-227ENST00000486806 NOTCH3Q9UM47 2321 aa7.09□□□□□ -1.28
MCF2L-227ENST00000486806 MGAM2Q2M2H8 2515 aa7.08□□□□□ -1.28
MCF2L-227ENST00000486806 IGKV2-40A0A087WW87 121 aaPredicted RBP7.08□□□□□ -1.28
MCF2L-227ENST00000486806 SERTM2A0A1B0GWG4 89 aa7.08□□□□□ -1.28
MCF2L-227ENST00000486806 SCO2A0A1W2PP80 73 aa7.08□□□□□ -1.28
MCF2L-227ENST00000486806 RBAKDNA6NC62 111 aa7.08□□□□□ -1.28
MCF2L-227ENST00000486806 NPIPB6E9PJ23 425 aa7.08□□□□□ -1.28
MCF2L-227ENST00000486806 PEX7O00628 323 aa7.08□□□□□ -1.28
MCF2L-227ENST00000486806 IGKV2D-40P01614 121 aaPredicted RBP7.08□□□□□ -1.28
MCF2L-227ENST00000486806 HLA-DRB4P13762 266 aa7.08□□□□□ -1.28
MCF2L-227ENST00000486806 CSN1S1P47710 185 aa7.08□□□□□ -1.28
MCF2L-227ENST00000486806 CYB561D1Q8N8Q1 229 aa7.08□□□□□ -1.28
MCF2L-227ENST00000486806 OR8A1Q8NGG7 326 aa7.08□□□□□ -1.28
MCF2L-227ENST00000486806 C2CD4CQ8TF44 421 aa7.08□□□□□ -1.28
MCF2L-227ENST00000486806 HLA-DRB4X5D2U9 266 aa7.08□□□□□ -1.28
MCF2L-227ENST00000486806 LINC00862A6NCI5 91 aa7.07□□□□□ -1.28
MCF2L-227ENST00000486806 KNCNA6PVL3 124 aa7.07□□□□□ -1.28
MCF2L-227ENST00000486806 H3BMM0 161 aa7.07□□□□□ -1.28
MCF2L-227ENST00000486806 PDE6DO43924 150 aa7.07□□□□□ -1.28
MCF2L-227ENST00000486806 IGLV2-11P01706 119 aa7.07□□□□□ -1.28
MCF2L-227ENST00000486806 CNN1P51911 297 aaKnown RBP7.07□□□□□ -1.28
MCF2L-227ENST00000486806 SRSF3P84103 164 aaKnown RBP7.07□□□□□ -1.28
MCF2L-227ENST00000486806 C9orf47Q6ZRZ4 202 aa7.07□□□□□ -1.28
MCF2L-227ENST00000486806 GOLT1AQ6ZVE7 132 aa7.07□□□□□ -1.28
MCF2L-227ENST00000486806 TRPT1Q86TN4 253 aaKnown RBP7.07□□□□□ -1.28
MCF2L-227ENST00000486806 DEFB125Q8N687 156 aa7.07□□□□□ -1.28
MCF2L-227ENST00000486806 TMEM75Q8N9X5 138 aa7.07□□□□□ -1.28
MCF2L-227ENST00000486806 CLUHP3Q96NS8 147 aa7.07□□□□□ -1.28
MCF2L-227ENST00000486806 AURKAIP1Q9NWT8 199 aaPredicted RBP7.07□□□□□ -1.28
MCF2L-227ENST00000486806 RPH3ALQ9UNE2 315 aa7.07□□□□□ -1.28
MCF2L-227ENST00000486806 RAB19A4D1S5 217 aa7.06□□□□□ -1.28
MCF2L-227ENST00000486806 RBMY1BA6NDE4 496 aaKnown RBP7.06□□□□□ -1.28
MCF2L-227ENST00000486806 RBMY1EA6NEQ0 496 aaKnown RBP7.06□□□□□ -1.28
MCF2L-227ENST00000486806 C9JQL5 133 aa7.06□□□□□ -1.28
MCF2L-227ENST00000486806 F6UZH7 168 aa7.06□□□□□ -1.28
MCF2L-227ENST00000486806 TMEM250H0YL14 139 aa7.06□□□□□ -1.28
MCF2L-227ENST00000486806 RBMY1DP0C7P1 496 aaKnown RBP7.06□□□□□ -1.28
MCF2L-227ENST00000486806 ZNF705DP0CH99 300 aaPredicted RBP7.06□□□□□ -1.28
MCF2L-227ENST00000486806 ZNF705BP0CI00 300 aaPredicted RBP7.06□□□□□ -1.28
MCF2L-227ENST00000486806 HIST1H1AQ02539 215 aaPredicted RBP7.06□□□□□ -1.28
MCF2L-227ENST00000486806 ACTL10Q5JWF8 245 aa7.06□□□□□ -1.28
MCF2L-227ENST00000486806 EBLN2Q6P2I7 272 aa7.06□□□□□ -1.28
MCF2L-227ENST00000486806 AMTNQ6UX39 209 aa7.06□□□□□ -1.28
MCF2L-227ENST00000486806 OR10J6PQ8NGY7 276 aa7.06□□□□□ -1.28
MCF2L-227ENST00000486806 FAM19A4Q96LR4 140 aa7.06□□□□□ -1.28
MCF2L-227ENST00000486806 VGLL1Q99990 258 aa7.06□□□□□ -1.28
MCF2L-227ENST00000486806 EIF5A2Q9GZV4 153 aaKnown RBP7.06□□□□□ -1.28
MCF2L-227ENST00000486806 SMDT1Q9H4I9 107 aa7.06□□□□□ -1.28
MCF2L-227ENST00000486806 PPP1R14DQ9NXH3 145 aa7.06□□□□□ -1.28
MCF2L-227ENST00000486806 KLF12Q9Y4X4 402 aa7.06□□□□□ -1.28
MCF2L-227ENST00000486806 TRAV8-1A0A0A6YYK1 113 aa7.05□□□□□ -1.28
MCF2L-227ENST00000486806 TRBV6-1A0A0K0K1D8 114 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms