RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 F8WDY8 70 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 ITGB1BP1O14713 200 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 CYB5BO43169 146 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 SCGB2A1O75556 95 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 OR2J3O76001 311 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 NAPSAO96009 420 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 PPYP01298 95 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 IGHV3-23P01764 117 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 TYMSP04818 313 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 SCTP09683 121 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 METTL15P1P0C7V9 234 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 OR13C7P0DN81 318 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 BMI1P35226 326 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 RANP62826 216 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 GAGE2BQ13066 116 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 MSMO1Q15800 293 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 ATP6V1FQ16864 119 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 MRGPRG-AS1Q2M3A8 158 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 GAGE2EQ4V326 116 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 C10orf55Q5SWW7 151 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 GAGE2AQ6NT46 116 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 ZNF880Q6PDB4 577 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 KCNIP4Q6PIL6 250 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 SPSB3Q6PJ21 355 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 C19orf35Q6ZS72 473 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 CYP2G1PQ6ZSU1 146 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 MOB1BQ7L9L4 216 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 FAM223AQ8IWN6 122 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 TMEM252Q8N6L7 170 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 SRSF12Q8WXF0 261 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 ATG101Q9BSB4 218 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 CABLES2Q9BTV7 478 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 Q9N2K0 584 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 GAGE2DQ9UEU5 116 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 S4R3C0 116 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 IGKV1-6A0A0C4DH72 117 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 TMEM213A2RRL7 107 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 A8MWP6 167 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 YIF1AO95070 293 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 RPL35AP18077 110 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 CBLN1P23435 193 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 APOC4P55056 127 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 UBE2V1Q13404 147 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 PRSS8Q16651 343 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 C15orf32Q32M92 178 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 NMSQ5H8A3 153 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 LYZL2Q7Z4W2 148 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 SLC35G3Q8N808 338 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 CYB561D1Q8N8Q1 229 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 OR5C1Q8NGR4 320 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 HIST1H2BLQ99880 126 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 C20orf24Q9BUV8 137 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 SMIM3Q9BZL3 60 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 MAGT1Q9H0U3 335 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 OR2D2Q9H210 308 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 WFDC1Q9HC57 220 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 SDF2L1Q9HCN8 221 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 TP53TG1Q9Y2A0 90 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 DYNC1H1Q14204 4646 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 ABCA13Q86UQ4 5058 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 DNAH6Q9C0G6 4158 aa4.75□□□□□ -1.65
TMEM39A-209ENST00000486235 TRBV9A0A0B4J1U6 114 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 IGSF23A1L1A6 192 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 LGALS9O00182 355 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 KBTBD11O94819 623 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 HRASP01112 189 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 TRGC2P03986 189 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 TRGC1P0CF51 173 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 AKR1C3P42330 323 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 PSMB3P49720 205 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 NANOS2P60321 138 aaKnown RBP4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 RELQ04864 619 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 GAGE1Q13065 139 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 RTL8BQ17RB0 113 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 TMEM241Q24JQ0 296 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 VMA21Q3ZAQ7 101 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 COX19Q49B96 90 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 TMEM41BQ5BJD5 291 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 CLEC19AQ6UXS0 136 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 NECAP1Q8NC96 275 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 OR1L6Q8NGR2 347 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 OR1P1Q8NH06 330 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 SH3BGRL3Q9H299 93 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 CBY1Q9Y3M2 126 aa4.74□□□□□ -1.65
TMEM39A-209ENST00000486235 IFITM10A6NMD0 228 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 H7BYZ3 331 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 M0R143 59 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 PHOX2AO14813 284 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 PDE6DO43924 150 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 SSSCA1O60232 199 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 SERPINE2P07093 398 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 CXCL1P09341 107 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 SAA1P0DJI8 122 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 FABP4P15090 132 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 FCGR2BP31994 310 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 NUTF2P61970 127 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 RAB11AP62491 216 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 PAFAH1B2P68402 229 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 MEF2BQ02080 365 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms