RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 STAG3L3P0CL85 134 aa7.91□□□□□ -1.14
ATG4B-219ENST00000479941 EIF5AP63241 154 aaKnown RBP7.91□□□□□ -1.14
ATG4B-219ENST00000479941 UBE2L3P68036 154 aaKnown RBP7.91□□□□□ -1.14
ATG4B-219ENST00000479941 LYPD1Q8N2G4 141 aa7.91□□□□□ -1.14
ATG4B-219ENST00000479941 OR8A1Q8NGG7 326 aa7.91□□□□□ -1.14
ATG4B-219ENST00000479941 HYLS1Q96M11 299 aa7.91□□□□□ -1.14
ATG4B-219ENST00000479941 RARRES2Q99969 163 aa7.91□□□□□ -1.14
ATG4B-219ENST00000479941 ZNF471Q9BX82 626 aaPredicted RBP7.91□□□□□ -1.14
ATG4B-219ENST00000479941 ACTR3CQ9C0K3 210 aaPredicted RBP7.91□□□□□ -1.14
ATG4B-219ENST00000479941 ZNF705FA8MVS1 300 aaPredicted RBP7.9□□□□□ -1.14
ATG4B-219ENST00000479941 HIST1H1AQ02539 215 aaPredicted RBP7.9□□□□□ -1.14
ATG4B-219ENST00000479941 AKR1C8PQ5T2L2 129 aa7.9□□□□□ -1.14
ATG4B-219ENST00000479941 TMUB2Q71RG4 321 aa7.9□□□□□ -1.14
ATG4B-219ENST00000479941 CSNK1G2-AS1Q8NCQ2 148 aa7.9□□□□□ -1.14
ATG4B-219ENST00000479941 RAB24Q969Q5 203 aa7.9□□□□□ -1.14
ATG4B-219ENST00000479941 EDA2RQ9HAV5 297 aa7.9□□□□□ -1.14
ATG4B-219ENST00000479941 A0A1B0GVG6 124 aa7.89□□□□□ -1.15
ATG4B-219ENST00000479941 PRAC2D3DTV9 90 aa7.89□□□□□ -1.15
ATG4B-219ENST00000479941 M0R3E3 92 aa7.89□□□□□ -1.15
ATG4B-219ENST00000479941 EIF3GO75821 320 aaKnown RBP eCLIP7.89□□□□□ -1.15
ATG4B-219ENST00000479941 AMBPP02760 352 aa7.89□□□□□ -1.15
ATG4B-219ENST00000479941 SEC11BP0C7V7 166 aa7.89□□□□□ -1.15
ATG4B-219ENST00000479941 ZNF705DP0CH99 300 aaPredicted RBP7.89□□□□□ -1.15
ATG4B-219ENST00000479941 ZNF705BP0CI00 300 aaPredicted RBP7.89□□□□□ -1.15
ATG4B-219ENST00000479941 RANP62826 216 aaKnown RBP7.89□□□□□ -1.15
ATG4B-219ENST00000479941 ICAM4Q14773 271 aa7.89□□□□□ -1.15
ATG4B-219ENST00000479941 LGALSLQ3ZCW2 172 aaPredicted RBP7.89□□□□□ -1.15
ATG4B-219ENST00000479941 AMTNQ6UX39 209 aa7.89□□□□□ -1.15
ATG4B-219ENST00000479941 BAP18Q8IXM2 172 aa7.89□□□□□ -1.15
ATG4B-219ENST00000479941 EXOC3-AS1Q8N2X6 119 aa7.89□□□□□ -1.15
ATG4B-219ENST00000479941 OR10J6PQ8NGY7 276 aa7.89□□□□□ -1.15
ATG4B-219ENST00000479941 OR11H2Q8NH07 326 aa7.89□□□□□ -1.15
ATG4B-219ENST00000479941 PHYHIPLQ96FC7 376 aa7.89□□□□□ -1.15
ATG4B-219ENST00000479941 SLC35B3Q9H1N7 401 aa7.89□□□□□ -1.15
ATG4B-219ENST00000479941 PPP1R14DQ9NXH3 145 aa7.89□□□□□ -1.15
ATG4B-219ENST00000479941 XCL2Q9UBD3 114 aa7.89□□□□□ -1.15
ATG4B-219ENST00000479941 STARD9Q9P2P6 4700 aa7.88□□□□□ -1.15
ATG4B-219ENST00000479941 CTXND1A0A1B0GTU2 59 aa7.88□□□□□ -1.15
ATG4B-219ENST00000479941 ZNF705EA8MWA4 302 aaPredicted RBP7.88□□□□□ -1.15
ATG4B-219ENST00000479941 HMGB3O15347 200 aaKnown RBP7.88□□□□□ -1.15
ATG4B-219ENST00000479941 CXorf1O96002 111 aa7.88□□□□□ -1.15
ATG4B-219ENST00000479941 ARL14EPLP0DKL9 152 aa7.88□□□□□ -1.15
ATG4B-219ENST00000479941 TPT1P13693 172 aaKnown RBP7.88□□□□□ -1.15
ATG4B-219ENST00000479941 FXYD7P58549 80 aa7.88□□□□□ -1.15
ATG4B-219ENST00000479941 STOML3Q8TAV4 291 aa7.88□□□□□ -1.15
ATG4B-219ENST00000479941 TMEM167BQ9NRX6 74 aa7.88□□□□□ -1.15
ATG4B-219ENST00000479941 PLECQ15149 4684 aaKnown RBP7.88□□□□□ -1.15
ATG4B-219ENST00000479941 UMAD1C9J7I0 102 aa7.87□□□□□ -1.15
ATG4B-219ENST00000479941 NPIPB6E9PJ23 425 aa7.87□□□□□ -1.15
ATG4B-219ENST00000479941 BOLA2-SMG1P6H3BVE0 249 aa7.87□□□□□ -1.15
ATG4B-219ENST00000479941 GCHFRP30047 84 aa7.87□□□□□ -1.15
ATG4B-219ENST00000479941 CSN1S1P47710 185 aa7.87□□□□□ -1.15
ATG4B-219ENST00000479941 SPINK13Q1W4C9 94 aa7.87□□□□□ -1.15
ATG4B-219ENST00000479941 ZFP69Q49AA0 526 aa7.87□□□□□ -1.15
ATG4B-219ENST00000479941 FAM74A1Q5RGS3 127 aa7.87□□□□□ -1.15
ATG4B-219ENST00000479941 SUN5Q8TC36 379 aa7.87□□□□□ -1.15
ATG4B-219ENST00000479941 RXFP4Q8TDU9 374 aa7.87□□□□□ -1.15
ATG4B-219ENST00000479941 IGF2BP2-AS1Q96M15 143 aa7.87□□□□□ -1.15
ATG4B-219ENST00000479941 Q9H3A6 140 aa7.87□□□□□ -1.15
ATG4B-219ENST00000479941 OTORQ9NRC9 128 aa7.87□□□□□ -1.15
ATG4B-219ENST00000479941 CSMD3Q7Z407 3707 aa7.87□□□□□ -1.15
ATG4B-219ENST00000479941 A0A0J9YWU9 116 aa7.86□□□□□ -1.15
ATG4B-219ENST00000479941 M0R2Z0 102 aa7.86□□□□□ -1.15
ATG4B-219ENST00000479941 INSP01308 110 aa7.86□□□□□ -1.15
ATG4B-219ENST00000479941 PRB4P10163 310 aaPredicted RBP7.86□□□□□ -1.15
ATG4B-219ENST00000479941 MIFP14174 115 aa7.86□□□□□ -1.15
ATG4B-219ENST00000479941 TSPOP30536 169 aa7.86□□□□□ -1.15
ATG4B-219ENST00000479941 CDKN1BP46527 198 aa7.86□□□□□ -1.15
ATG4B-219ENST00000479941 CD300CQ08708 224 aa7.86□□□□□ -1.15
ATG4B-219ENST00000479941 ZNF726P1Q15940 193 aa7.86□□□□□ -1.15
ATG4B-219ENST00000479941 EIF5AL1Q6IS14 154 aaKnown RBP7.86□□□□□ -1.15
ATG4B-219ENST00000479941 ZNF705AQ6ZN79 300 aaPredicted RBP7.86□□□□□ -1.15
ATG4B-219ENST00000479941 SSX7Q7RTT5 188 aa7.86□□□□□ -1.15
ATG4B-219ENST00000479941 ARL6IP6Q8N6S5 226 aa7.86□□□□□ -1.15
ATG4B-219ENST00000479941 LINC00477Q96M19 166 aa7.86□□□□□ -1.15
ATG4B-219ENST00000479941 ODF3Q96PU9 254 aa7.86□□□□□ -1.15
ATG4B-219ENST00000479941 NEU1Q99519 415 aa7.86□□□□□ -1.15
ATG4B-219ENST00000479941 C11orf68Q9H3H3 251 aaKnown RBP7.86□□□□□ -1.15
ATG4B-219ENST00000479941 GOLT1BQ9Y3E0 138 aa7.86□□□□□ -1.15
ATG4B-219ENST00000479941 X6R8D5 127 aa7.86□□□□□ -1.15
ATG4B-219ENST00000479941 DYNC2H1Q8NCM8 4307 aaKnown RBP7.86□□□□□ -1.15
ATG4B-219ENST00000479941 PGPA6NDG6 321 aa7.85□□□□□ -1.15
ATG4B-219ENST00000479941 CRXO43186 299 aaPredicted RBP7.85□□□□□ -1.15
ATG4B-219ENST00000479941 SLC25A5P05141 298 aaKnown RBP7.85□□□□□ -1.15
ATG4B-219ENST00000479941 TMEM78Q5T7P6 136 aa7.85□□□□□ -1.15
ATG4B-219ENST00000479941 DPPA3Q6W0C5 159 aa7.85□□□□□ -1.15
ATG4B-219ENST00000479941 C9orf47Q6ZRZ4 202 aa7.85□□□□□ -1.15
ATG4B-219ENST00000479941 SLC51BQ86UW2 128 aa7.85□□□□□ -1.15
ATG4B-219ENST00000479941 IL17DQ8TAD2 202 aa7.85□□□□□ -1.15
ATG4B-219ENST00000479941 CMTM2Q8TAZ6 248 aa7.85□□□□□ -1.15
ATG4B-219ENST00000479941 TMED6Q8WW62 240 aa7.85□□□□□ -1.15
ATG4B-219ENST00000479941 TRAV12-2A0A075B6T6 113 aa7.84□□□□□ -1.15
ATG4B-219ENST00000479941 RBAKDNA6NC62 111 aa7.84□□□□□ -1.15
ATG4B-219ENST00000479941 MAP1LC3B2A6NCE7 125 aa7.84□□□□□ -1.15
ATG4B-219ENST00000479941 SMIM9A6NGZ8 99 aa7.84□□□□□ -1.15
ATG4B-219ENST00000479941 DIRC3C9JPN6 131 aa7.84□□□□□ -1.15
ATG4B-219ENST00000479941 CT45A10P0DMU9 189 aa7.84□□□□□ -1.15
ATG4B-219ENST00000479941 LEPP41159 167 aa7.84□□□□□ -1.15
ATG4B-219ENST00000479941 IQCF2Q8IXL9 164 aa7.84□□□□□ -1.15
ATG4B-219ENST00000479941 C1orf158Q8N1D5 194 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms