RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	GCSAML	Q5JQS6	135 aa		11.36	□□□□□ -0.59
HDLBP-238	ENST00000479894	FAM122C	Q6P4D5	195 aa		11.36	□□□□□ -0.59
HDLBP-238	ENST00000479894	C16orf92	Q96LL3	132 aa		11.36	□□□□□ -0.59
HDLBP-238	ENST00000479894	PAXX	Q9BUH6	204 aa		11.36	□□□□□ -0.59
HDLBP-238	ENST00000479894	OR51M1	Q9H341	326 aa		11.36	□□□□□ -0.59
HDLBP-238	ENST00000479894	CTXND1	A0A1B0GTU2	59 aa		11.35	□□□□□ -0.59
HDLBP-238	ENST00000479894	C11orf94	C9JXX5	98 aa		11.35	□□□□□ -0.59
HDLBP-238	ENST00000479894	TEX46	H3BTG2	121 aa		11.35	□□□□□ -0.59
HDLBP-238	ENST00000479894	OR7C2	O60412	319 aa		11.35	□□□□□ -0.59
HDLBP-238	ENST00000479894	RAB2A	P61019	212 aa		11.35	□□□□□ -0.59
HDLBP-238	ENST00000479894	MIR17HG	Q75NE6	70 aa		11.35	□□□□□ -0.59
HDLBP-238	ENST00000479894	DCANP1	Q8TF63	244 aa		11.35	□□□□□ -0.59
HDLBP-238	ENST00000479894	RPRM	Q9NS64	109 aa		11.35	□□□□□ -0.59
HDLBP-238	ENST00000479894	SELENOK	Q9Y6D0	94 aa		11.35	□□□□□ -0.59
HDLBP-238	ENST00000479894	IGLL5	B9A064	214 aa		11.34	□□□□□ -0.59
HDLBP-238	ENST00000479894	CXorf1	O96002	111 aa		11.34	□□□□□ -0.59
HDLBP-238	ENST00000479894	SPATA31B1P	Q5VZV4	182 aa		11.34	□□□□□ -0.59
HDLBP-238	ENST00000479894	RNF141	Q8WVD5	230 aa		11.34	□□□□□ -0.59
HDLBP-238	ENST00000479894	RAB24	Q969Q5	203 aa		11.34	□□□□□ -0.59
HDLBP-238	ENST00000479894	TMEM167B	Q9NRX6	74 aa		11.34	□□□□□ -0.59
HDLBP-238	ENST00000479894	TRAV5	A0A0B4J249	113 aa		11.33	□□□□□ -0.6
HDLBP-238	ENST00000479894	NBEAP1	P0C6P0	100 aa		11.33	□□□□□ -0.6
HDLBP-238	ENST00000479894	IGLC2	P0DOY2	106 aa		11.33	□□□□□ -0.6
HDLBP-238	ENST00000479894	LYPD1	Q8N2G4	141 aa		11.33	□□□□□ -0.6
HDLBP-238	ENST00000479894	TMED6	Q8WW62	240 aa		11.33	□□□□□ -0.6
HDLBP-238	ENST00000479894	RARRES2	Q99969	163 aa		11.33	□□□□□ -0.6
HDLBP-238	ENST00000479894	SLC25A2	Q9BXI2	301 aa		11.33	□□□□□ -0.6
HDLBP-238	ENST00000479894	AAMDC	Q9H7C9	122 aa		11.33	□□□□□ -0.6
HDLBP-238	ENST00000479894	MAP6D1	Q9H9H5	199 aa		11.33	□□□□□ -0.6
HDLBP-238	ENST00000479894	PRELID1	Q9Y255	219 aa		11.33	□□□□□ -0.6
HDLBP-238	ENST00000479894	MRPS12	O15235	138 aa	Known RBP	11.32	□□□□□ -0.6
HDLBP-238	ENST00000479894	CDK2AP2	O75956	126 aa		11.32	□□□□□ -0.6
HDLBP-238	ENST00000479894	STAG3L2	P0CL84	134 aa		11.32	□□□□□ -0.6
HDLBP-238	ENST00000479894	STAG3L3	P0CL85	134 aa		11.32	□□□□□ -0.6
HDLBP-238	ENST00000479894	UBE2L3	P68036	154 aa	Known RBP	11.32	□□□□□ -0.6
HDLBP-238	ENST00000479894	FAM74A1	Q5RGS3	127 aa		11.32	□□□□□ -0.6
HDLBP-238	ENST00000479894	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.32	□□□□□ -0.6
HDLBP-238	ENST00000479894	ZNF575	Q86XF7	245 aa		11.32	□□□□□ -0.6
HDLBP-238	ENST00000479894	FAM167A-AS1	Q96KT0	104 aa		11.32	□□□□□ -0.6
HDLBP-238	ENST00000479894	TRBV19	A0A075B6N1	114 aa		11.31	□□□□□ -0.6
HDLBP-238	ENST00000479894	PPT1	P50897	306 aa		11.31	□□□□□ -0.6
HDLBP-238	ENST00000479894	NKX2-5	P52952	324 aa	Predicted RBP	11.31	□□□□□ -0.6
HDLBP-238	ENST00000479894	MORN5	Q5VZ52	161 aa		11.31	□□□□□ -0.6
HDLBP-238	ENST00000479894	EBLN2	Q6P2I7	272 aa		11.31	□□□□□ -0.6
HDLBP-238	ENST00000479894	LINC00052	Q96N35	136 aa		11.31	□□□□□ -0.6
HDLBP-238	ENST00000479894	HBE1	P02100	147 aa		11.3	□□□□□ -0.6
HDLBP-238	ENST00000479894	ZNF688	P0C7X2	276 aa		11.3	□□□□□ -0.6
HDLBP-238	ENST00000479894	LGALS9B	Q3B8N2	356 aa		11.3	□□□□□ -0.6
HDLBP-238	ENST00000479894	PSMG4	Q5JS54	123 aa		11.3	□□□□□ -0.6
HDLBP-238	ENST00000479894	FAM213B	Q8TBF2	198 aa		11.3	□□□□□ -0.6
HDLBP-238	ENST00000479894	MRPL53	Q96EL3	112 aa	Known RBP	11.3	□□□□□ -0.6
HDLBP-238	ENST00000479894	NKX6-2	Q9C056	277 aa	Predicted RBP	11.3	□□□□□ -0.6
HDLBP-238	ENST00000479894	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.3	□□□□□ -0.6
HDLBP-238	ENST00000479894	UBQLN2	Q9UHD9	624 aa		11.3	□□□□□ -0.6
HDLBP-238	ENST00000479894	RFNG	Q9Y644	331 aa		11.3	□□□□□ -0.6
HDLBP-238	ENST00000479894	MAP1LC3B2	A6NCE7	125 aa		11.29	□□□□□ -0.6
HDLBP-238	ENST00000479894	SOCS3	O14543	225 aa		11.29	□□□□□ -0.6
HDLBP-238	ENST00000479894	H2AFB1	P0C5Y9	115 aa		11.29	□□□□□ -0.6
HDLBP-238	ENST00000479894	ARL14EPL	P0DKL9	152 aa		11.29	□□□□□ -0.6
HDLBP-238	ENST00000479894	PYY	P10082	97 aa		11.29	□□□□□ -0.6
HDLBP-238	ENST00000479894	RPL35A	P18077	110 aa	Known RBP	11.29	□□□□□ -0.6
HDLBP-238	ENST00000479894	CSN1S1	P47710	185 aa		11.29	□□□□□ -0.6
HDLBP-238	ENST00000479894	SULT1A2	P50226	295 aa		11.29	□□□□□ -0.6
HDLBP-238	ENST00000479894	DEFB131A	P59861	70 aa		11.29	□□□□□ -0.6
HDLBP-238	ENST00000479894	ODF3L2	Q3SX64	289 aa		11.29	□□□□□ -0.6
HDLBP-238	ENST00000479894	MAPKAPK5-AS1	Q8N8E1	139 aa		11.29	□□□□□ -0.6
HDLBP-238	ENST00000479894	RXFP4	Q8TDU9	374 aa		11.29	□□□□□ -0.6
HDLBP-238	ENST00000479894	BLNK	Q8WV28	456 aa		11.29	□□□□□ -0.6
HDLBP-238	ENST00000479894	MBD3L1	Q8WWY6	194 aa		11.29	□□□□□ -0.6
HDLBP-238	ENST00000479894	FXYD5	Q96DB9	178 aa		11.29	□□□□□ -0.6
HDLBP-238	ENST00000479894	MAP1LC3B	Q9GZQ8	125 aa		11.29	□□□□□ -0.6
HDLBP-238	ENST00000479894	ZNF586	Q9NXT0	402 aa		11.29	□□□□□ -0.6
HDLBP-238	ENST00000479894		H3BQ15	152 aa		11.28	□□□□□ -0.6
HDLBP-238	ENST00000479894	DUSP14	O95147	198 aa	Known RBP	11.28	□□□□□ -0.6
HDLBP-238	ENST00000479894	OR10J4	P0C629	311 aa		11.28	□□□□□ -0.6
HDLBP-238	ENST00000479894	GCHFR	P30047	84 aa		11.28	□□□□□ -0.6
HDLBP-238	ENST00000479894	NUTF2	P61970	127 aa	Known RBP	11.28	□□□□□ -0.6
HDLBP-238	ENST00000479894	BLOC1S1	P78537	153 aa		11.28	□□□□□ -0.6
HDLBP-238	ENST00000479894	PSG3	Q16557	428 aa		11.28	□□□□□ -0.6
HDLBP-238	ENST00000479894	FOXI2	Q6ZQN5	318 aa		11.28	□□□□□ -0.6
HDLBP-238	ENST00000479894	STH	Q8IWL8	128 aa		11.28	□□□□□ -0.6
HDLBP-238	ENST00000479894	IQCF2	Q8IXL9	164 aa		11.28	□□□□□ -0.6
HDLBP-238	ENST00000479894	ARL6IP6	Q8N6S5	226 aa		11.28	□□□□□ -0.6
HDLBP-238	ENST00000479894	POM121L12	Q8N7R1	296 aa		11.28	□□□□□ -0.6
HDLBP-238	ENST00000479894	ZNF738	Q8NE65	137 aa		11.28	□□□□□ -0.6
HDLBP-238	ENST00000479894	SFT2D1	Q8WV19	159 aa		11.28	□□□□□ -0.6
HDLBP-238	ENST00000479894	SAT2	Q96F10	170 aa	Predicted RBP	11.28	□□□□□ -0.6
HDLBP-238	ENST00000479894	CSTL1	Q9H114	145 aa		11.28	□□□□□ -0.6
HDLBP-238	ENST00000479894	TRAV1-1	A0A0B4J248	108 aa		11.27	□□□□□ -0.61
HDLBP-238	ENST00000479894	IFNA7	P01567	189 aa		11.27	□□□□□ -0.61
HDLBP-238	ENST00000479894	OR11H2	Q8NH07	326 aa		11.27	□□□□□ -0.61
HDLBP-238	ENST00000479894	CMTM2	Q8TAZ6	248 aa		11.27	□□□□□ -0.61
HDLBP-238	ENST00000479894	OTOR	Q9NRC9	128 aa		11.27	□□□□□ -0.61
HDLBP-238	ENST00000479894	DMBT1	Q9UGM3	2413 aa	Predicted RBP	11.27	□□□□□ -0.61
HDLBP-238	ENST00000479894	IGHV4-4	A0A075B6R2	117 aa		11.26	□□□□□ -0.61
HDLBP-238	ENST00000479894	BOLA2-SMG1P6	H3BVE0	249 aa		11.26	□□□□□ -0.61
HDLBP-238	ENST00000479894		Q8N1X5	172 aa		11.26	□□□□□ -0.61
HDLBP-238	ENST00000479894	OR10J6P	Q8NGY7	276 aa		11.26	□□□□□ -0.61
HDLBP-238	ENST00000479894	SUN5	Q8TC36	379 aa		11.26	□□□□□ -0.61
HDLBP-238	ENST00000479894	CLUHP3	Q96NS8	147 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms