RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 IGKV2D-40P01614 121 aaPredicted RBP10.07□□□□□ -0.8
SEC13-216ENST00000479868 OR4B1Q8NGF8 309 aa10.07□□□□□ -0.8
SEC13-216ENST00000479868 C18orf32Q8TCD1 76 aa10.07□□□□□ -0.8
SEC13-216ENST00000479868 EEF1AKMT3Q96AZ1 226 aa10.07□□□□□ -0.8
SEC13-216ENST00000479868 ANKRD17O75179 2603 aaKnown RBP10.07□□□□□ -0.8
SEC13-216ENST00000479868 UBR5O95071 2799 aaPredicted RBP10.07□□□□□ -0.8
SEC13-216ENST00000479868 A0A1W2PS18 150 aa10.07□□□□□ -0.8
SEC13-216ENST00000479868 IGHG4P01861 327 aa10.07□□□□□ -0.8
SEC13-216ENST00000479868 HLA-DMBP28068 263 aa10.07□□□□□ -0.8
SEC13-216ENST00000479868 CSN1S1P47710 185 aa10.07□□□□□ -0.8
SEC13-216ENST00000479868 KCNS1Q96KK3 526 aa10.07□□□□□ -0.8
SEC13-216ENST00000479868 CSPG4Q6UVK1 2322 aa10.07□□□□□ -0.8
SEC13-216ENST00000479868 FAM231BA6NCW3 169 aa10.06□□□□□ -0.8
SEC13-216ENST00000479868 TSTD3H0UI37 97 aa10.06□□□□□ -0.8
SEC13-216ENST00000479868 H3BUX3 64 aa10.06□□□□□ -0.8
SEC13-216ENST00000479868 BUB3O43684 328 aa10.06□□□□□ -0.8
SEC13-216ENST00000479868 AVPP01185 164 aa10.06□□□□□ -0.8
SEC13-216ENST00000479868 GPX1P07203 203 aa10.06□□□□□ -0.8
SEC13-216ENST00000479868 HIF1ANQ9NWT6 349 aa10.06□□□□□ -0.8
SEC13-216ENST00000479868 USP9YO00507 2555 aaPredicted RBP10.06□□□□□ -0.8
SEC13-216ENST00000479868 IGHV3OR16-13A0A075B7E8 117 aa10.06□□□□□ -0.8
SEC13-216ENST00000479868 TRBV7-1A0A0A6YYK4 115 aa10.06□□□□□ -0.8
SEC13-216ENST00000479868 IGHV3-74A0A0B4J1X5 117 aa10.06□□□□□ -0.8
SEC13-216ENST00000479868 IGHV3-66A0A0C4DH42 116 aa10.06□□□□□ -0.8
SEC13-216ENST00000479868 CHEK1O14757 476 aa10.06□□□□□ -0.8
SEC13-216ENST00000479868 PAX1P15863 534 aa10.06□□□□□ -0.8
SEC13-216ENST00000479868 ALKBH7Q9BT30 221 aaPredicted RBP10.06□□□□□ -0.8
SEC13-216ENST00000479868 NAGKQ9UJ70 344 aa10.06□□□□□ -0.8
SEC13-216ENST00000479868 RNF114Q9Y508 228 aa10.06□□□□□ -0.8
SEC13-216ENST00000479868 ZNF705FA8MVS1 300 aaPredicted RBP10.05□□□□□ -0.8
SEC13-216ENST00000479868 A8MWP6 167 aa10.05□□□□□ -0.8
SEC13-216ENST00000479868 APOHP02749 345 aaPredicted RBP10.05□□□□□ -0.8
SEC13-216ENST00000479868 CRIP2P52943 208 aaPredicted RBP10.05□□□□□ -0.8
SEC13-216ENST00000479868 ATP5G2Q06055 141 aa10.05□□□□□ -0.8
SEC13-216ENST00000479868 SIGLECL1Q8N7X8 197 aa10.05□□□□□ -0.8
SEC13-216ENST00000479868 PMCHP20382 165 aa10.04□□□□□ -0.8
SEC13-216ENST00000479868 DDTP30046 118 aa10.04□□□□□ -0.8
SEC13-216ENST00000479868 AMTP48728 403 aa10.04□□□□□ -0.8
SEC13-216ENST00000479868 SRSF1Q07955 248 aaKnown RBP eCLIP10.04□□□□□ -0.8
SEC13-216ENST00000479868 CHTOPQ9Y3Y2 248 aaKnown RBP10.04□□□□□ -0.8
SEC13-216ENST00000479868 ZANQ9Y493 2812 aa10.04□□□□□ -0.8
SEC13-216ENST00000479868 EPG5Q9HCE0 2579 aa10.04□□□□□ -0.8
SEC13-216ENST00000479868 SERTM2A0A1B0GWG4 89 aa10.04□□□□□ -0.8
SEC13-216ENST00000479868 B4DSR2 109 aa10.04□□□□□ -0.8
SEC13-216ENST00000479868 ZNF207O43670 478 aaKnown RBP10.04□□□□□ -0.8
SEC13-216ENST00000479868 FOXA3P55318 350 aaPredicted RBP10.04□□□□□ -0.8
SEC13-216ENST00000479868 VGLL1Q99990 258 aa10.04□□□□□ -0.8
SEC13-216ENST00000479868 IGHV3-49A0A0A0MS15 119 aa10.03□□□□□ -0.8
SEC13-216ENST00000479868 A6NDX4 124 aa10.03□□□□□ -0.8
SEC13-216ENST00000479868 ZNF324O75467 553 aaPredicted RBP10.03□□□□□ -0.8
SEC13-216ENST00000479868 TRGV3P03979 118 aa10.03□□□□□ -0.8
SEC13-216ENST00000479868 S100A7P31151 101 aa10.03□□□□□ -0.8
SEC13-216ENST00000479868 FAM19A2Q8N3H0 131 aa10.03□□□□□ -0.8
SEC13-216ENST00000479868 Q8TAT8 98 aa10.03□□□□□ -0.8
SEC13-216ENST00000479868 IGF1P05019 195 aa10.03□□□□□ -0.8
SEC13-216ENST00000479868 CT45A10P0DMU9 189 aa10.03□□□□□ -0.8
SEC13-216ENST00000479868 KLF5Q13887 457 aaPredicted RBP10.03□□□□□ -0.8
SEC13-216ENST00000479868 PRR25Q96S07 402 aa10.03□□□□□ -0.8
SEC13-216ENST00000479868 A0A087X0K7 114 aa10.02□□□□□ -0.8
SEC13-216ENST00000479868 A1L4Q6 167 aa10.02□□□□□ -0.8
SEC13-216ENST00000479868 FAM223BA6NKX1 122 aa10.02□□□□□ -0.8
SEC13-216ENST00000479868 HAX1O00165 279 aa10.02□□□□□ -0.8
SEC13-216ENST00000479868 ARMS2P0C7Q2 107 aa10.02□□□□□ -0.8
SEC13-216ENST00000479868 RAB9AP51151 201 aa10.02□□□□□ -0.8
SEC13-216ENST00000479868 BLCAPP62952 87 aa10.02□□□□□ -0.8
SEC13-216ENST00000479868 LCN12Q6JVE5 192 aa10.02□□□□□ -0.8
SEC13-216ENST00000479868 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.02□□□□□ -0.8
SEC13-216ENST00000479868 Q6ZS46 218 aa10.02□□□□□ -0.8
SEC13-216ENST00000479868 FAM223AQ8IWN6 122 aa10.02□□□□□ -0.8
SEC13-216ENST00000479868 ZNF843Q8N446 348 aa10.02□□□□□ -0.8
SEC13-216ENST00000479868 RNF182Q8N6D2 247 aa10.02□□□□□ -0.8
SEC13-216ENST00000479868 NRN1Q9NPD7 142 aa10.02□□□□□ -0.8
SEC13-216ENST00000479868 A0A1B0GV90 55 aa10.02□□□□□ -0.81
SEC13-216ENST00000479868 IGHG2P01859 326 aa10.02□□□□□ -0.81
SEC13-216ENST00000479868 ZNF705DP0CH99 300 aaPredicted RBP10.02□□□□□ -0.81
SEC13-216ENST00000479868 ZNF705BP0CI00 300 aaPredicted RBP10.02□□□□□ -0.81
SEC13-216ENST00000479868 DEFA6Q01524 100 aa10.02□□□□□ -0.81
SEC13-216ENST00000479868 TM4SF20Q53R12 229 aa10.02□□□□□ -0.81
SEC13-216ENST00000479868 PTPN13Q12923 2485 aa10.01□□□□□ -0.81
SEC13-216ENST00000479868 PRAC2D3DTV9 90 aa10.01□□□□□ -0.81
SEC13-216ENST00000479868 SH2D1AO60880 128 aa10.01□□□□□ -0.81
SEC13-216ENST00000479868 TRBV12-3P01733 135 aa10.01□□□□□ -0.81
SEC13-216ENST00000479868 PPIFP30405 207 aaKnown RBP10.01□□□□□ -0.81
SEC13-216ENST00000479868 DSCR9P59020 149 aa10.01□□□□□ -0.81
SEC13-216ENST00000479868 NIT1Q86X76 327 aa10.01□□□□□ -0.81
SEC13-216ENST00000479868 METTL26Q96S19 204 aa10.01□□□□□ -0.81
SEC13-216ENST00000479868 A0A1B0GUT8 65 aa10.01□□□□□ -0.81
SEC13-216ENST00000479868 NTF3P20783 257 aa10.01□□□□□ -0.81
SEC13-216ENST00000479868 ZNF80P51504 273 aaPredicted RBP10.01□□□□□ -0.81
SEC13-216ENST00000479868 SAPCD1Q5SSQ6 148 aa10.01□□□□□ -0.81
SEC13-216ENST00000479868 COX8CQ7Z4L0 72 aa10.01□□□□□ -0.81
SEC13-216ENST00000479868 C14orf144Q96I85 54 aa10.01□□□□□ -0.81
SEC13-216ENST00000479868 TPPP3Q9BW30 176 aa10.01□□□□□ -0.81
SEC13-216ENST00000479868 TMSB15BA0A087X1C1 80 aa10□□□□□ -0.81
SEC13-216ENST00000479868 A0A096LNT2 108 aa10□□□□□ -0.81
SEC13-216ENST00000479868 COX6B1P14854 86 aa10□□□□□ -0.81
SEC13-216ENST00000479868 SLC25A16P16260 332 aa10□□□□□ -0.81
SEC13-216ENST00000479868 ARL3P36405 182 aa10□□□□□ -0.81
SEC13-216ENST00000479868 KRTDAPP60985 99 aa10□□□□□ -0.81
SEC13-216ENST00000479868 ERCC8Q13216 396 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms