RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 SLC50A1Q9BRV3 221 aa8.47□□□□□ -1.05
APTX-223ENST00000479656 ATG101Q9BSB4 218 aa8.47□□□□□ -1.05
APTX-223ENST00000479656 NRN1Q9NPD7 142 aa8.47□□□□□ -1.05
APTX-223ENST00000479656 AURKAIP1Q9NWT8 199 aaPredicted RBP8.47□□□□□ -1.05
APTX-223ENST00000479656 NAT8Q9UHE5 227 aa8.47□□□□□ -1.05
APTX-223ENST00000479656 NIPBLQ6KC79 2804 aaeCLIP8.47□□□□□ -1.05
APTX-223ENST00000479656 DIRC3C9JPN6 131 aa8.47□□□□□ -1.05
APTX-223ENST00000479656 ISLRO14498 428 aa8.47□□□□□ -1.05
APTX-223ENST00000479656 OVOL1O14753 267 aa8.47□□□□□ -1.05
APTX-223ENST00000479656 CNN1P51911 297 aaKnown RBP8.47□□□□□ -1.05
APTX-223ENST00000479656 LCN12Q6JVE5 192 aa8.47□□□□□ -1.05
APTX-223ENST00000479656 GOLT1AQ6ZVE7 132 aa8.47□□□□□ -1.05
APTX-223ENST00000479656 SOCS3O14543 225 aa8.46□□□□□ -1.06
APTX-223ENST00000479656 CSN1S1P47710 185 aa8.46□□□□□ -1.06
APTX-223ENST00000479656 RPL23P62829 140 aaKnown RBP8.46□□□□□ -1.06
APTX-223ENST00000479656 OCC1Q8TAD7 63 aa8.46□□□□□ -1.06
APTX-223ENST00000479656 TMA7Q9Y2S6 64 aaKnown RBP8.46□□□□□ -1.06
APTX-223ENST00000479656 TRAV8-1A0A0A6YYK1 113 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 TFPI2P48307 235 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 GNG4P50150 75 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 TAS2R60P59551 318 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 UBE2G1P62253 170 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 ADIRFQ15847 76 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 TMEM183BQ1AE95 376 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 CENPWQ5EE01 88 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 C20orf173Q96LM9 149 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 CITED1Q99966 193 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 MS4A6AQ9H2W1 248 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 KLF12Q9Y4X4 402 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 C7orf77A4D0Y5 90 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 C9JCJ5 164 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 PRAC2D3DTV9 90 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 PNRC1Q12796 327 aaPredicted RBP8.45□□□□□ -1.06
APTX-223ENST00000479656 PSG3Q16557 428 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 LINC01551Q86U37 167 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 BAGE2Q86Y30 109 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 LINC00469Q8N7U9 141 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 DCANP1Q8TF63 244 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 IGF2BP2-AS1Q96M15 143 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 RPS10P5Q9NQ39 176 aa8.45□□□□□ -1.06
APTX-223ENST00000479656 SETD2Q9BYW2 2564 aaPredicted RBP8.44□□□□□ -1.06
APTX-223ENST00000479656 IGKV2-40A0A087WW87 121 aaPredicted RBP8.44□□□□□ -1.06
APTX-223ENST00000479656 DNASE2O00115 360 aaPredicted RBP8.44□□□□□ -1.06
APTX-223ENST00000479656 IGKV2D-40P01614 121 aaPredicted RBP8.44□□□□□ -1.06
APTX-223ENST00000479656 IGLV2-11P01706 119 aa8.44□□□□□ -1.06
APTX-223ENST00000479656 DEFB114Q30KQ6 69 aa8.44□□□□□ -1.06
APTX-223ENST00000479656 ARL6IP6Q8N6S5 226 aa8.44□□□□□ -1.06
APTX-223ENST00000479656 NHLRC2Q8NBF2 726 aa8.44□□□□□ -1.06
APTX-223ENST00000479656 DYNLRB2Q8TF09 96 aa8.44□□□□□ -1.06
APTX-223ENST00000479656 FMC1Q96HJ9 113 aa8.44□□□□□ -1.06
APTX-223ENST00000479656 ASCL2Q99929 193 aa8.44□□□□□ -1.06
APTX-223ENST00000479656 TEP1Q99973 2627 aaKnown RBP8.44□□□□□ -1.06
APTX-223ENST00000479656 K7EQM0 130 aa8.43□□□□□ -1.06
APTX-223ENST00000479656 IGLV2-8P01709 118 aa8.43□□□□□ -1.06
APTX-223ENST00000479656 PF4P02776 101 aa8.43□□□□□ -1.06
APTX-223ENST00000479656 S100A9P06702 114 aaKnown RBP8.43□□□□□ -1.06
APTX-223ENST00000479656 PRNTQ86SH4 94 aa8.43□□□□□ -1.06
APTX-223ENST00000479656 VGLL1Q99990 258 aa8.43□□□□□ -1.06
APTX-223ENST00000479656 CLEC5AQ9NY25 188 aa8.43□□□□□ -1.06
APTX-223ENST00000479656 JMJD1CQ15652 2540 aa8.43□□□□□ -1.06
APTX-223ENST00000479656 K7EN84 100 aa8.43□□□□□ -1.06
APTX-223ENST00000479656 K7EQG2 157 aa8.43□□□□□ -1.06
APTX-223ENST00000479656 FLI1Q01543 452 aaPredicted RBP8.43□□□□□ -1.06
APTX-223ENST00000479656 ERCC8Q13216 396 aa8.43□□□□□ -1.06
APTX-223ENST00000479656 OR5I1Q13606 314 aa8.43□□□□□ -1.06
APTX-223ENST00000479656 RBPMS2Q6ZRY4 209 aaKnown RBP8.43□□□□□ -1.06
APTX-223ENST00000479656 TMEM61Q8N0U2 210 aa8.43□□□□□ -1.06
APTX-223ENST00000479656 FAM24BQ8N5W8 94 aa8.43□□□□□ -1.06
APTX-223ENST00000479656 TMEM75Q8N9X5 138 aa8.43□□□□□ -1.06
APTX-223ENST00000479656 ZNF738Q8NE65 137 aa8.43□□□□□ -1.06
APTX-223ENST00000479656 PSG8Q9UQ74 426 aa8.43□□□□□ -1.06
APTX-223ENST00000479656 SERTM2A0A1B0GWG4 89 aa8.42□□□□□ -1.06
APTX-223ENST00000479656 MGST1P10620 155 aaKnown RBP8.42□□□□□ -1.06
APTX-223ENST00000479656 ID1P41134 155 aa8.42□□□□□ -1.06
APTX-223ENST00000479656 DEFB1P60022 68 aa8.42□□□□□ -1.06
APTX-223ENST00000479656 PAFAH1B2P68402 229 aa8.42□□□□□ -1.06
APTX-223ENST00000479656 RHEBQ15382 184 aa8.42□□□□□ -1.06
APTX-223ENST00000479656 CD300EQ496F6 205 aaPredicted RBP8.42□□□□□ -1.06
APTX-223ENST00000479656 ISOC2Q96AB3 205 aa8.42□□□□□ -1.06
APTX-223ENST00000479656 MRPL53Q96EL3 112 aaKnown RBP8.42□□□□□ -1.06
APTX-223ENST00000479656 SIGLEC8Q9NYZ4 499 aa8.42□□□□□ -1.06
APTX-223ENST00000479656 LY96Q9Y6Y9 160 aa8.42□□□□□ -1.06
APTX-223ENST00000479656 B4DEV8 164 aa8.41□□□□□ -1.06
APTX-223ENST00000479656 TSPAN4O14817 238 aa8.41□□□□□ -1.06
APTX-223ENST00000479656 LTAP01374 205 aa8.41□□□□□ -1.06
APTX-223ENST00000479656 ZNF705DP0CH99 300 aaPredicted RBP8.41□□□□□ -1.06
APTX-223ENST00000479656 ZNF705BP0CI00 300 aaPredicted RBP8.41□□□□□ -1.06
APTX-223ENST00000479656 BTN1A1Q13410 526 aa8.41□□□□□ -1.06
APTX-223ENST00000479656 RNF212Q495C1 297 aa8.41□□□□□ -1.06
APTX-223ENST00000479656 Q86TA4 180 aa8.41□□□□□ -1.06
APTX-223ENST00000479656 LINC00482Q8N8I6 264 aa8.41□□□□□ -1.06
APTX-223ENST00000479656 TRBV6-1A0A0K0K1D8 114 aa8.4□□□□□ -1.06
APTX-223ENST00000479656 IZUMO1RA6ND01 250 aa8.4□□□□□ -1.06
APTX-223ENST00000479656 F6UB75 175 aa8.4□□□□□ -1.06
APTX-223ENST00000479656 SAP30O75446 220 aa8.4□□□□□ -1.06
APTX-223ENST00000479656 ZNF688P0C7X2 276 aa8.4□□□□□ -1.06
APTX-223ENST00000479656 TMEM88Q6PEY1 159 aa8.4□□□□□ -1.06
APTX-223ENST00000479656 MLST8Q9BVC4 326 aa8.4□□□□□ -1.06
APTX-223ENST00000479656 AGPAT4-IT1Q9H0P7 198 aa8.4□□□□□ -1.06
APTX-223ENST00000479656 RBAKDNA6NC62 111 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms