RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 CD81P60033 236 aa10.7□□□□□ -0.7
USP11-207ENST00000478596 SNRPD3P62318 126 aaKnown RBP10.7□□□□□ -0.7
USP11-207ENST00000478596 TMEM14CQ9P0S9 112 aa10.7□□□□□ -0.7
USP11-207ENST00000478596 H2AFB1P0C5Y9 115 aa10.69□□□□□ -0.7
USP11-207ENST00000478596 ZNF688P0C7X2 276 aa10.69□□□□□ -0.7
USP11-207ENST00000478596 GUK1Q16774 197 aa10.69□□□□□ -0.7
USP11-207ENST00000478596 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.69□□□□□ -0.7
USP11-207ENST00000478596 SSX7Q7RTT5 188 aa10.69□□□□□ -0.7
USP11-207ENST00000478596 DEFB125Q8N687 156 aa10.69□□□□□ -0.7
USP11-207ENST00000478596 SFT2D1Q8WV19 159 aa10.69□□□□□ -0.7
USP11-207ENST00000478596 RNF141Q8WVD5 230 aa10.69□□□□□ -0.7
USP11-207ENST00000478596 LINC00052Q96N35 136 aa10.69□□□□□ -0.7
USP11-207ENST00000478596 AAMDCQ9H7C9 122 aa10.69□□□□□ -0.7
USP11-207ENST00000478596 UBQLN2Q9UHD9 624 aa10.69□□□□□ -0.7
USP11-207ENST00000478596 A0A087X0K7 114 aa10.68□□□□□ -0.7
USP11-207ENST00000478596 STAG3L2P0CL84 134 aa10.68□□□□□ -0.7
USP11-207ENST00000478596 STAG3L3P0CL85 134 aa10.68□□□□□ -0.7
USP11-207ENST00000478596 HIST1H1EP10412 219 aaKnown RBP10.68□□□□□ -0.7
USP11-207ENST00000478596 GCHFRP30047 84 aa10.68□□□□□ -0.7
USP11-207ENST00000478596 ZNF726P1Q15940 193 aa10.68□□□□□ -0.7
USP11-207ENST00000478596 PSMG4Q5JS54 123 aa10.68□□□□□ -0.7
USP11-207ENST00000478596 FAM90A2PQ658T7 463 aa10.68□□□□□ -0.7
USP11-207ENST00000478596 FAM167A-AS1Q96KT0 104 aa10.68□□□□□ -0.7
USP11-207ENST00000478596 SLC50A1Q9BRV3 221 aa10.68□□□□□ -0.7
USP11-207ENST00000478596 SRD5A3Q9H8P0 318 aa10.68□□□□□ -0.7
USP11-207ENST00000478596 TMEM167BQ9NRX6 74 aa10.68□□□□□ -0.7
USP11-207ENST00000478596 TRAV2A0A0B4J234 112 aa10.67□□□□□ -0.7
USP11-207ENST00000478596 OR11H12B2RN74 326 aa10.67□□□□□ -0.7
USP11-207ENST00000478596 HBE1P02100 147 aa10.67□□□□□ -0.7
USP11-207ENST00000478596 IGLC2P0DOY2 106 aa10.67□□□□□ -0.7
USP11-207ENST00000478596 PSMB3P49720 205 aa10.67□□□□□ -0.7
USP11-207ENST00000478596 TEX261Q6UWH6 196 aa10.67□□□□□ -0.7
USP11-207ENST00000478596 ZNF738Q8NE65 137 aa10.67□□□□□ -0.7
USP11-207ENST00000478596 PHLDA1Q8WV24 401 aaPredicted RBP10.67□□□□□ -0.7
USP11-207ENST00000478596 HRH4Q9H3N8 390 aa10.67□□□□□ -0.7
USP11-207ENST00000478596 UBR4Q5T4S7 5183 aa10.66□□□□□ -0.7
USP11-207ENST00000478596 H3BQ15 152 aa10.66□□□□□ -0.7
USP11-207ENST00000478596 K7EQG2 157 aa10.66□□□□□ -0.7
USP11-207ENST00000478596 SLC17A3O00476 420 aa10.66□□□□□ -0.7
USP11-207ENST00000478596 ISLRO14498 428 aa10.66□□□□□ -0.7
USP11-207ENST00000478596 NBEAP1P0C6P0 100 aa10.66□□□□□ -0.7
USP11-207ENST00000478596 UBE2G2P60604 165 aa10.66□□□□□ -0.7
USP11-207ENST00000478596 BLOC1S1P78537 153 aa10.66□□□□□ -0.7
USP11-207ENST00000478596 PSG9Q00887 426 aa10.66□□□□□ -0.7
USP11-207ENST00000478596 FXYD5Q96DB9 178 aa10.66□□□□□ -0.7
USP11-207ENST00000478596 ZNF586Q9NXT0 402 aa10.66□□□□□ -0.7
USP11-207ENST00000478596 RPH3ALQ9UNE2 315 aa10.66□□□□□ -0.7
USP11-207ENST00000478596 TRBV19A0A075B6N1 114 aa10.65□□□□□ -0.7
USP11-207ENST00000478596 MRPS12O15235 138 aaKnown RBP10.65□□□□□ -0.7
USP11-207ENST00000478596 IFNA1P01562 189 aa10.65□□□□□ -0.7
USP11-207ENST00000478596 CD7P09564 240 aa10.65□□□□□ -0.7
USP11-207ENST00000478596 RAB14P61106 215 aa10.65□□□□□ -0.7
USP11-207ENST00000478596 PDE6HQ13956 83 aa10.65□□□□□ -0.7
USP11-207ENST00000478596 RNF182Q8N6D2 247 aa10.65□□□□□ -0.7
USP11-207ENST00000478596 ZNF680Q8NEM1 530 aa10.65□□□□□ -0.7
USP11-207ENST00000478596 DCANP1Q8TF63 244 aa10.65□□□□□ -0.7
USP11-207ENST00000478596 C17orf77Q96MU5 243 aa10.65□□□□□ -0.7
USP11-207ENST00000478596 WFDC10AQ9H1F0 79 aa10.65□□□□□ -0.7
USP11-207ENST00000478596 MAP6D1Q9H9H5 199 aa10.65□□□□□ -0.7
USP11-207ENST00000478596 PRSS29PA6NIE9 313 aa10.64□□□□□ -0.71
USP11-207ENST00000478596 CMC4P56277 68 aaPredicted RBP10.64□□□□□ -0.71
USP11-207ENST00000478596 DEFB131AP59861 70 aa10.64□□□□□ -0.71
USP11-207ENST00000478596 RANP62826 216 aaKnown RBP10.64□□□□□ -0.71
USP11-207ENST00000478596 IGFL4Q6B9Z1 124 aa10.64□□□□□ -0.71
USP11-207ENST00000478596 FAM24BQ8N5W8 94 aa10.64□□□□□ -0.71
USP11-207ENST00000478596 CMTM2Q8TAZ6 248 aa10.64□□□□□ -0.71
USP11-207ENST00000478596 ZNF503Q96F45 646 aa10.64□□□□□ -0.71
USP11-207ENST00000478596 TMPRSS5Q9H3S3 457 aa10.64□□□□□ -0.71
USP11-207ENST00000478596 ZNF331Q9NQX6 463 aaPredicted RBP10.64□□□□□ -0.71
USP11-207ENST00000478596 GNG13Q9P2W3 67 aa10.64□□□□□ -0.71
USP11-207ENST00000478596 ZNF253O75346 499 aa10.63□□□□□ -0.71
USP11-207ENST00000478596 CSN1S1P47710 185 aa10.63□□□□□ -0.71
USP11-207ENST00000478596 PPT1P50897 306 aa10.63□□□□□ -0.71
USP11-207ENST00000478596 ICAM4Q14773 271 aa10.63□□□□□ -0.71
USP11-207ENST00000478596 CST9LP1Q5W188 147 aa10.63□□□□□ -0.71
USP11-207ENST00000478596 Q9H3A6 140 aa10.63□□□□□ -0.71
USP11-207ENST00000478596 TP53TG1Q9Y2A0 90 aa10.63□□□□□ -0.71
USP11-207ENST00000478596 SOCS3O14543 225 aa10.62□□□□□ -0.71
USP11-207ENST00000478596 HLA-DMBP28068 263 aa10.62□□□□□ -0.71
USP11-207ENST00000478596 TCTAP57738 103 aa10.62□□□□□ -0.71
USP11-207ENST00000478596 ODF3L2Q3SX64 289 aa10.62□□□□□ -0.71
USP11-207ENST00000478596 EBLN2Q6P2I7 272 aa10.62□□□□□ -0.71
USP11-207ENST00000478596 APRG1Q8IVJ8 170 aa10.62□□□□□ -0.71
USP11-207ENST00000478596 EXOC3-AS1Q8N2X6 119 aa10.62□□□□□ -0.71
USP11-207ENST00000478596 PCNPQ8WW12 178 aaKnown RBP10.62□□□□□ -0.71
USP11-207ENST00000478596 MBD3L1Q8WWY6 194 aa10.62□□□□□ -0.71
USP11-207ENST00000478596 SAT2Q96F10 170 aaPredicted RBP10.62□□□□□ -0.71
USP11-207ENST00000478596 CLEC5AQ9NY25 188 aa10.62□□□□□ -0.71
USP11-207ENST00000478596 DMBT1Q9UGM3 2413 aaPredicted RBP10.62□□□□□ -0.71
USP11-207ENST00000478596 SLC25A5P05141 298 aaKnown RBP10.61□□□□□ -0.71
USP11-207ENST00000478596 PSG3Q16557 428 aa10.61□□□□□ -0.71
USP11-207ENST00000478596 ACTL10Q5JWF8 245 aa10.61□□□□□ -0.71
USP11-207ENST00000478596 ZNF767PQ75MW2 155 aa10.61□□□□□ -0.71
USP11-207ENST00000478596 RPUSD4Q96CM3 377 aaKnown RBP10.61□□□□□ -0.71
USP11-207ENST00000478596 MANBALQ9NQG1 85 aa10.61□□□□□ -0.71
USP11-207ENST00000478596 OTORQ9NRC9 128 aa10.61□□□□□ -0.71
USP11-207ENST00000478596 PRELID1Q9Y255 219 aa10.61□□□□□ -0.71
USP11-207ENST00000478596 TRAV8-2A0A0B4J237 113 aa10.6□□□□□ -0.71
USP11-207ENST00000478596 NDUFB4O95168 129 aa10.6□□□□□ -0.71
USP11-207ENST00000478596 PRB4P10163 310 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms