RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 OPCMLQ14982 345 aa10.16□□□□□ -0.78
SMARCE1-209ENST00000478349 TTC32Q5I0X7 151 aa10.16□□□□□ -0.78
SMARCE1-209ENST00000478349 NRARPQ7Z6K4 114 aa10.16□□□□□ -0.78
SMARCE1-209ENST00000478349 MRPL53Q96EL3 112 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-209ENST00000478349 C2orf50Q96LR7 162 aa10.16□□□□□ -0.78
SMARCE1-209ENST00000478349 WDR83OSQ9Y284 106 aa10.16□□□□□ -0.78
SMARCE1-209ENST00000478349 NBDYA0A0U1RRE5 68 aa10.15□□□□□ -0.78
SMARCE1-209ENST00000478349 MPDU1O75352 247 aa10.15□□□□□ -0.78
SMARCE1-209ENST00000478349 CST7O76096 145 aa10.15□□□□□ -0.78
SMARCE1-209ENST00000478349 M6PRP20645 277 aa10.15□□□□□ -0.78
SMARCE1-209ENST00000478349 ARL16Q0P5N6 197 aa10.15□□□□□ -0.78
SMARCE1-209ENST00000478349 ATP6V1FQ16864 119 aa10.15□□□□□ -0.78
SMARCE1-209ENST00000478349 TMEM37Q8WXS4 190 aa10.15□□□□□ -0.78
SMARCE1-209ENST00000478349 GNPNAT1Q96EK6 184 aaPredicted RBP10.15□□□□□ -0.78
SMARCE1-209ENST00000478349 ZNF503Q96F45 646 aa10.15□□□□□ -0.78
SMARCE1-209ENST00000478349 PYGO2Q9BRQ0 406 aa10.15□□□□□ -0.78
SMARCE1-209ENST00000478349 CCDC32Q9BV29 185 aa10.15□□□□□ -0.78
SMARCE1-209ENST00000478349 LYRM2Q9NU23 88 aaPredicted RBP10.15□□□□□ -0.78
SMARCE1-209ENST00000478349 PRELID1Q9Y255 219 aa10.15□□□□□ -0.78
SMARCE1-209ENST00000478349 TRAV6A0A075B6T7 132 aa10.14□□□□□ -0.79
SMARCE1-209ENST00000478349 UBE2L5PA0A1B0GUS4 154 aa10.14□□□□□ -0.79
SMARCE1-209ENST00000478349 SLC17A3O00476 420 aa10.14□□□□□ -0.79
SMARCE1-209ENST00000478349 PRM2P04554 102 aa10.14□□□□□ -0.79
SMARCE1-209ENST00000478349 RPL29P47914 159 aaKnown RBP10.14□□□□□ -0.79
SMARCE1-209ENST00000478349 PDE6HQ13956 83 aa10.14□□□□□ -0.79
SMARCE1-209ENST00000478349 VWC2Q2TAL6 325 aa10.14□□□□□ -0.79
SMARCE1-209ENST00000478349 GFI1BQ5VTD9 330 aa10.14□□□□□ -0.79
SMARCE1-209ENST00000478349 C6orf223Q8N319 242 aa10.14□□□□□ -0.79
SMARCE1-209ENST00000478349 ZNF680Q8NEM1 530 aa10.14□□□□□ -0.79
SMARCE1-209ENST00000478349 KCNIP2Q9NS61 270 aa10.14□□□□□ -0.79
SMARCE1-209ENST00000478349 SLC39A9Q9NUM3 307 aa10.14□□□□□ -0.79
SMARCE1-209ENST00000478349 NPIPB6E9PJ23 425 aa10.13□□□□□ -0.79
SMARCE1-209ENST00000478349 J3QL48 77 aa10.13□□□□□ -0.79
SMARCE1-209ENST00000478349 PLA2G10O15496 165 aa10.13□□□□□ -0.79
SMARCE1-209ENST00000478349 OR5I1Q13606 314 aa10.13□□□□□ -0.79
SMARCE1-209ENST00000478349 FCN2Q15485 313 aa10.13□□□□□ -0.79
SMARCE1-209ENST00000478349 MIC13Q5XKP0 118 aa10.13□□□□□ -0.79
SMARCE1-209ENST00000478349 MZT2BQ6NZ67 158 aa10.13□□□□□ -0.79
SMARCE1-209ENST00000478349 ZNRF2Q8NHG8 242 aa10.13□□□□□ -0.79
SMARCE1-209ENST00000478349 CHAC2Q8WUX2 184 aa10.13□□□□□ -0.79
SMARCE1-209ENST00000478349 RNF141Q8WVD5 230 aa10.13□□□□□ -0.79
SMARCE1-209ENST00000478349 AAMDCQ9H7C9 122 aa10.13□□□□□ -0.79
SMARCE1-209ENST00000478349 TIMM9Q9Y5J7 89 aa10.13□□□□□ -0.79
SMARCE1-209ENST00000478349 HERC2O95714 4834 aa10.12□□□□□ -0.79
SMARCE1-209ENST00000478349 FAM240BA0A1B0GVZ2 78 aa10.12□□□□□ -0.79
SMARCE1-209ENST00000478349 H3BNG1 76 aa10.12□□□□□ -0.79
SMARCE1-209ENST00000478349 H3BTX0 84 aa10.12□□□□□ -0.79
SMARCE1-209ENST00000478349 SLC25A5P05141 298 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-209ENST00000478349 SNRPCP09234 159 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-209ENST00000478349 H2AFB2P0C5Z0 115 aa10.12□□□□□ -0.79
SMARCE1-209ENST00000478349 FGF7P21781 194 aa10.12□□□□□ -0.79
SMARCE1-209ENST00000478349 RXFP4Q8TDU9 374 aa10.12□□□□□ -0.79
SMARCE1-209ENST00000478349 SAT2Q96F10 170 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-209ENST00000478349 SEC22CQ9BRL7 303 aa10.12□□□□□ -0.79
SMARCE1-209ENST00000478349 KRTAP17-1Q9BYP8 105 aa10.12□□□□□ -0.79
SMARCE1-209ENST00000478349 GPN1Q9HCN4 374 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-209ENST00000478349 TMEM14CQ9P0S9 112 aa10.12□□□□□ -0.79
SMARCE1-209ENST00000478349 TRBV19A0A075B6N1 114 aa10.11□□□□□ -0.79
SMARCE1-209ENST00000478349 FAM24AA6NFZ4 105 aa10.11□□□□□ -0.79
SMARCE1-209ENST00000478349 H3BQ15 152 aa10.11□□□□□ -0.79
SMARCE1-209ENST00000478349 HIST1H1EP10412 219 aaKnown RBP10.11□□□□□ -0.79
SMARCE1-209ENST00000478349 DAZ2Q13117 558 aaKnown RBP10.11□□□□□ -0.79
SMARCE1-209ENST00000478349 MORN5Q5VZ52 161 aa10.11□□□□□ -0.79
SMARCE1-209ENST00000478349 SSX7Q7RTT5 188 aa10.11□□□□□ -0.79
SMARCE1-209ENST00000478349 TMEM252Q8N6L7 170 aa10.11□□□□□ -0.79
SMARCE1-209ENST00000478349 LINC00612Q8N6U2 182 aa10.11□□□□□ -0.79
SMARCE1-209ENST00000478349 TRAV26-1A0A087WT03 109 aa10.1□□□□□ -0.79
SMARCE1-209ENST00000478349 TRAV12-3A0A0B4J271 114 aa10.1□□□□□ -0.79
SMARCE1-209ENST00000478349 GAGE12BA1L429 117 aa10.1□□□□□ -0.79
SMARCE1-209ENST00000478349 PRAC2D3DTV9 90 aa10.1□□□□□ -0.79
SMARCE1-209ENST00000478349 J3KRW8 73 aa10.1□□□□□ -0.79
SMARCE1-209ENST00000478349 GAGE7O76087 117 aa10.1□□□□□ -0.79
SMARCE1-209ENST00000478349 GAGE12FP0CL80 117 aa10.1□□□□□ -0.79
SMARCE1-209ENST00000478349 GAGE12GP0CL81 117 aa10.1□□□□□ -0.79
SMARCE1-209ENST00000478349 GAGE12IP0CL82 117 aa10.1□□□□□ -0.79
SMARCE1-209ENST00000478349 RAB32Q13637 225 aa10.1□□□□□ -0.79
SMARCE1-209ENST00000478349 LCE2AQ5TA79 106 aaPredicted RBP10.1□□□□□ -0.79
SMARCE1-209ENST00000478349 LINC00299Q6ZSB3 139 aa10.1□□□□□ -0.79
SMARCE1-209ENST00000478349 LINC00477Q96M19 166 aa10.1□□□□□ -0.79
SMARCE1-209ENST00000478349 SLC25A31Q9H0C2 315 aa10.1□□□□□ -0.79
SMARCE1-209ENST00000478349 LINC00588Q9Y4M8 146 aa10.1□□□□□ -0.79
SMARCE1-209ENST00000478349 TRGV2A0A075B6R0 118 aa10.09□□□□□ -0.79
SMARCE1-209ENST00000478349 C7orf71A4D174 169 aa10.09□□□□□ -0.79
SMARCE1-209ENST00000478349 CT45A10P0DMU9 189 aa10.09□□□□□ -0.79
SMARCE1-209ENST00000478349 BTF3P20290 206 aaKnown RBP10.09□□□□□ -0.79
SMARCE1-209ENST00000478349 TMEM78Q5T7P6 136 aa10.09□□□□□ -0.79
SMARCE1-209ENST00000478349 S100ZQ8WXG8 99 aa10.09□□□□□ -0.79
SMARCE1-209ENST00000478349 PARD6GQ9BYG4 376 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-209ENST00000478349 C11orf1Q9H5F2 150 aa10.09□□□□□ -0.79
SMARCE1-209ENST00000478349 ZNF586Q9NXT0 402 aa10.09□□□□□ -0.79
SMARCE1-209ENST00000478349 TRAV5A0A0B4J249 113 aa10.08□□□□□ -0.8
SMARCE1-209ENST00000478349 A0A1W2PPQ1 181 aa10.08□□□□□ -0.8
SMARCE1-209ENST00000478349 IGSF23A1L1A6 192 aa10.08□□□□□ -0.8
SMARCE1-209ENST00000478349 C16orf90A8MZG2 172 aa10.08□□□□□ -0.8
SMARCE1-209ENST00000478349 NMBP08949 121 aa10.08□□□□□ -0.8
SMARCE1-209ENST00000478349 PRB4P10163 310 aaPredicted RBP10.08□□□□□ -0.8
SMARCE1-209ENST00000478349 ENKURQ8TC29 256 aa10.08□□□□□ -0.8
SMARCE1-209ENST00000478349 LINC00467Q9BRT7 94 aa10.08□□□□□ -0.8
SMARCE1-209ENST00000478349 NPCDR1Q9BY65 106 aa10.08□□□□□ -0.8
SMARCE1-209ENST00000478349 Q9H8V8 135 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms