RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 WFDC1Q9HC57 220 aa7.12□□□□□ -1.27
HDAC3-208ENST00000476739 SLC39A9Q9NUM3 307 aa7.12□□□□□ -1.27
HDAC3-208ENST00000476739 TNFSF18Q9UNG2 199 aa7.12□□□□□ -1.27
HDAC3-208ENST00000476739 TRAV8-2A0A0B4J237 113 aa7.11□□□□□ -1.27
HDAC3-208ENST00000476739 KIR2DL5BA0A0G2JN68 375 aa7.11□□□□□ -1.27
HDAC3-208ENST00000476739 KIR2DL5BA0A0G2JPC4 375 aa7.11□□□□□ -1.27
HDAC3-208ENST00000476739 TAAR5O14804 337 aa7.11□□□□□ -1.27
HDAC3-208ENST00000476739 GIG44P09565 113 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-208ENST00000476739 PRB4P10163 310 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-208ENST00000476739 GALR1P47211 349 aa7.11□□□□□ -1.27
HDAC3-208ENST00000476739 APOC4P55056 127 aa7.11□□□□□ -1.27
HDAC3-208ENST00000476739 SNRPD3P62318 126 aaKnown RBP7.11□□□□□ -1.27
HDAC3-208ENST00000476739 RAB31Q13636 194 aa7.11□□□□□ -1.27
HDAC3-208ENST00000476739 GCSAMLQ5JQS6 135 aa7.11□□□□□ -1.27
HDAC3-208ENST00000476739 C10orf113Q5VZT2 155 aa7.11□□□□□ -1.27
HDAC3-208ENST00000476739 TRPT1Q86TN4 253 aaKnown RBP7.11□□□□□ -1.27
HDAC3-208ENST00000476739 KIR2DL5AQ8N109 375 aa7.11□□□□□ -1.27
HDAC3-208ENST00000476739 KIR2DL5BQ8NHK3 375 aa7.11□□□□□ -1.27
HDAC3-208ENST00000476739 ATP5SQ99766 215 aa7.11□□□□□ -1.27
HDAC3-208ENST00000476739 ZNF471Q9BX82 626 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-208ENST00000476739 WDR61Q9GZS3 305 aaKnown RBP7.11□□□□□ -1.27
HDAC3-208ENST00000476739 CSTL1Q9H114 145 aa7.11□□□□□ -1.27
HDAC3-208ENST00000476739 EDA2RQ9HAV5 297 aa7.11□□□□□ -1.27
HDAC3-208ENST00000476739 RFNGQ9Y644 331 aa7.11□□□□□ -1.27
HDAC3-208ENST00000476739 PXMP4Q9Y6I8 212 aa7.11□□□□□ -1.27
HDAC3-208ENST00000476739 F6UB75 175 aa7.1□□□□□ -1.27
HDAC3-208ENST00000476739 COX7A2P2O60397 106 aa7.1□□□□□ -1.27
HDAC3-208ENST00000476739 HLA-DMBP28068 263 aa7.1□□□□□ -1.27
HDAC3-208ENST00000476739 PSMB3P49720 205 aa7.1□□□□□ -1.27
HDAC3-208ENST00000476739 PPT1P50897 306 aa7.1□□□□□ -1.27
HDAC3-208ENST00000476739 Q6ZRG5 221 aa7.1□□□□□ -1.27
HDAC3-208ENST00000476739 STHQ8IWL8 128 aa7.1□□□□□ -1.27
HDAC3-208ENST00000476739 BAP18Q8IXM2 172 aa7.1□□□□□ -1.27
HDAC3-208ENST00000476739 ZFP82Q8N141 532 aa7.1□□□□□ -1.27
HDAC3-208ENST00000476739 RNF182Q8N6D2 247 aa7.1□□□□□ -1.27
HDAC3-208ENST00000476739 C16orf92Q96LL3 132 aa7.1□□□□□ -1.27
HDAC3-208ENST00000476739 GPR82Q96P67 336 aa7.1□□□□□ -1.27
HDAC3-208ENST00000476739 SEPSECSQ9HD40 501 aaKnown RBP7.1□□□□□ -1.27
HDAC3-208ENST00000476739 DNAJC4Q9NNZ3 241 aa7.1□□□□□ -1.27
HDAC3-208ENST00000476739 H3BMM0 161 aa7.09□□□□□ -1.27
HDAC3-208ENST00000476739 H3BTX0 84 aa7.09□□□□□ -1.27
HDAC3-208ENST00000476739 ISLRO14498 428 aa7.09□□□□□ -1.27
HDAC3-208ENST00000476739 SPRY2O43597 315 aa7.09□□□□□ -1.27
HDAC3-208ENST00000476739 MPDU1O75352 247 aa7.09□□□□□ -1.27
HDAC3-208ENST00000476739 CA1P00915 261 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-208ENST00000476739 RPL7P18124 248 aaKnown RBP7.09□□□□□ -1.27
HDAC3-208ENST00000476739 SPATA31B1PQ5VZV4 182 aa7.09□□□□□ -1.27
HDAC3-208ENST00000476739 Q6ZWC4 215 aa7.09□□□□□ -1.27
HDAC3-208ENST00000476739 HSD17B11Q8NBQ5 300 aa7.09□□□□□ -1.27
HDAC3-208ENST00000476739 RNF183Q96D59 192 aa7.09□□□□□ -1.27
HDAC3-208ENST00000476739 NDUFAF3Q9BU61 184 aa7.09□□□□□ -1.27
HDAC3-208ENST00000476739 DNAH7Q8WXX0 4024 aa7.09□□□□□ -1.27
HDAC3-208ENST00000476739 NBEAL2Q6ZNJ1 2754 aa7.08□□□□□ -1.28
HDAC3-208ENST00000476739 A0A087X0K7 114 aa7.08□□□□□ -1.28
HDAC3-208ENST00000476739 CXorf65A6NEN9 183 aa7.08□□□□□ -1.28
HDAC3-208ENST00000476739 H3BQ15 152 aa7.08□□□□□ -1.28
HDAC3-208ENST00000476739 SLC17A3O00476 420 aa7.08□□□□□ -1.28
HDAC3-208ENST00000476739 IGKV3-20P01619 116 aa7.08□□□□□ -1.28
HDAC3-208ENST00000476739 IGLC2P0DOY2 106 aa7.08□□□□□ -1.28
HDAC3-208ENST00000476739 HLA-DRB4P13762 266 aa7.08□□□□□ -1.28
HDAC3-208ENST00000476739 S100A7P31151 101 aa7.08□□□□□ -1.28
HDAC3-208ENST00000476739 ID1P41134 155 aa7.08□□□□□ -1.28
HDAC3-208ENST00000476739 OR1L4Q8NGR5 311 aa7.08□□□□□ -1.28
HDAC3-208ENST00000476739 CLEC5AQ9NY25 188 aa7.08□□□□□ -1.28
HDAC3-208ENST00000476739 HLA-DRB4X5D2U9 266 aa7.08□□□□□ -1.28
HDAC3-208ENST00000476739 STAB2Q8WWQ8 2551 aa7.08□□□□□ -1.28
HDAC3-208ENST00000476739 TMEM238LA0A1B0GVL6 79 aa7.07□□□□□ -1.28
HDAC3-208ENST00000476739 PPP1R2P9O14990 202 aa7.07□□□□□ -1.28
HDAC3-208ENST00000476739 ZNF705DP0CH99 300 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-208ENST00000476739 ZNF705BP0CI00 300 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-208ENST00000476739 ADCYAP1P18509 176 aa7.07□□□□□ -1.28
HDAC3-208ENST00000476739 FXYD7P58549 80 aa7.07□□□□□ -1.28
HDAC3-208ENST00000476739 FAM78BQ5VT40 261 aa7.07□□□□□ -1.28
HDAC3-208ENST00000476739 FOXI2Q6ZQN5 318 aa7.07□□□□□ -1.28
HDAC3-208ENST00000476739 MIR17HGQ75NE6 70 aa7.07□□□□□ -1.28
HDAC3-208ENST00000476739 BPIFA4PQ86YQ2 179 aa7.07□□□□□ -1.28
HDAC3-208ENST00000476739 GATAD1Q8WUU5 269 aa7.07□□□□□ -1.28
HDAC3-208ENST00000476739 AQP10Q96PS8 301 aa7.07□□□□□ -1.28
HDAC3-208ENST00000476739 RPS10P5Q9NQ39 176 aa7.07□□□□□ -1.28
HDAC3-208ENST00000476739 ZNF586Q9NXT0 402 aa7.07□□□□□ -1.28
HDAC3-208ENST00000476739 TP53TG1Q9Y2A0 90 aa7.07□□□□□ -1.28
HDAC3-208ENST00000476739 GOLT1BQ9Y3E0 138 aa7.07□□□□□ -1.28
HDAC3-208ENST00000476739 CHTOPQ9Y3Y2 248 aaKnown RBP7.07□□□□□ -1.28
HDAC3-208ENST00000476739 A0A0J9YWU9 116 aa7.06□□□□□ -1.28
HDAC3-208ENST00000476739 A0A0J9YX75 114 aa7.06□□□□□ -1.28
HDAC3-208ENST00000476739 ZNF705EA8MWA4 302 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-208ENST00000476739 M0R143 59 aa7.06□□□□□ -1.28
HDAC3-208ENST00000476739 GCGP01275 180 aa7.06□□□□□ -1.28
HDAC3-208ENST00000476739 IFNA5P01569 189 aa7.06□□□□□ -1.28
HDAC3-208ENST00000476739 PYYP10082 97 aa7.06□□□□□ -1.28
HDAC3-208ENST00000476739 PYY3Q5JQD4 70 aa7.06□□□□□ -1.28
HDAC3-208ENST00000476739 SAMD13Q5VXD3 122 aa7.06□□□□□ -1.28
HDAC3-208ENST00000476739 S100A7AQ86SG5 101 aa7.06□□□□□ -1.28
HDAC3-208ENST00000476739 ZNF709Q8N972 641 aa7.06□□□□□ -1.28
HDAC3-208ENST00000476739 CSNK1G2-AS1Q8NCQ2 148 aa7.06□□□□□ -1.28
HDAC3-208ENST00000476739 OR4B1Q8NGF8 309 aa7.06□□□□□ -1.28
HDAC3-208ENST00000476739 SCGB1C1Q8TD33 95 aa7.06□□□□□ -1.28
HDAC3-208ENST00000476739 FAM167A-AS1Q96KT0 104 aa7.06□□□□□ -1.28
HDAC3-208ENST00000476739 SLC25A2Q9BXI2 301 aa7.06□□□□□ -1.28
HDAC3-208ENST00000476739 PARD6GQ9BYG4 376 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms