RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 MED11Q9P086 117 aa4.45□□□□□ -1.7
LRCH3-215ENST00000476664 ASB4Q9Y574 426 aa4.45□□□□□ -1.7
LRCH3-215ENST00000476664 TRAPPC1Q9Y5R8 145 aa4.45□□□□□ -1.7
LRCH3-215ENST00000476664 KMT2AQ03164 3969 aa4.45□□□□□ -1.7
LRCH3-215ENST00000476664 E7EQL1 145 aa4.44□□□□□ -1.7
LRCH3-215ENST00000476664 ZNF861PO60384 105 aa4.44□□□□□ -1.7
LRCH3-215ENST00000476664 FAM107AO95990 144 aa4.44□□□□□ -1.7
LRCH3-215ENST00000476664 IFNA10P01566 189 aa4.44□□□□□ -1.7
LRCH3-215ENST00000476664 C1QAP02745 245 aa4.44□□□□□ -1.7
LRCH3-215ENST00000476664 MSMBP08118 114 aa4.44□□□□□ -1.7
LRCH3-215ENST00000476664 CGB3P0DN86 165 aa4.44□□□□□ -1.7
LRCH3-215ENST00000476664 CGB7P0DN87 165 aa4.44□□□□□ -1.7
LRCH3-215ENST00000476664 RAB13P51153 203 aa4.44□□□□□ -1.7
LRCH3-215ENST00000476664 DHRS2Q13268 280 aa4.44□□□□□ -1.7
LRCH3-215ENST00000476664 LYRM7Q5U5X0 104 aa4.44□□□□□ -1.7
LRCH3-215ENST00000476664 GFI1BQ5VTD9 330 aa4.44□□□□□ -1.7
LRCH3-215ENST00000476664 SCIMPQ6UWF3 145 aa4.44□□□□□ -1.7
LRCH3-215ENST00000476664 TCF24Q7RTU0 167 aa4.44□□□□□ -1.7
LRCH3-215ENST00000476664 SPANXA2-OT1Q8N9U9 137 aa4.44□□□□□ -1.7
LRCH3-215ENST00000476664 NUP35Q8NFH5 326 aa4.44□□□□□ -1.7
LRCH3-215ENST00000476664 CD200R1Q8TD46 325 aa4.44□□□□□ -1.7
LRCH3-215ENST00000476664 KLK5Q9Y337 293 aaPredicted RBP4.44□□□□□ -1.7
LRCH3-215ENST00000476664 CLDN25C9JDP6 229 aa4.43□□□□□ -1.7
LRCH3-215ENST00000476664 BANF1O75531 89 aa4.43□□□□□ -1.7
LRCH3-215ENST00000476664 LHBP01229 141 aa4.43□□□□□ -1.7
LRCH3-215ENST00000476664 CSN2P05814 226 aa4.43□□□□□ -1.7
LRCH3-215ENST00000476664 DEFA3P59666 94 aa4.43□□□□□ -1.7
LRCH3-215ENST00000476664 Q5W150 140 aa4.43□□□□□ -1.7
LRCH3-215ENST00000476664 ZFAND2AQ8N6M9 145 aa4.43□□□□□ -1.7
LRCH3-215ENST00000476664 HIST1H2BAQ96A08 127 aa4.43□□□□□ -1.7
LRCH3-215ENST00000476664 KRTAP4-12Q9BQ66 201 aa4.43□□□□□ -1.7
LRCH3-215ENST00000476664 EFCAB1Q9HAE3 211 aa4.43□□□□□ -1.7
LRCH3-215ENST00000476664 CELA1Q9UNI1 258 aa4.43□□□□□ -1.7
LRCH3-215ENST00000476664 SRRM2Q9UQ35 2752 aaKnown RBP4.43□□□□□ -1.7
LRCH3-215ENST00000476664 BORCS7-ASMTA0A0B4J1R7 106 aa4.42□□□□□ -1.7
LRCH3-215ENST00000476664 UBE2L6O14933 153 aa4.42□□□□□ -1.7
LRCH3-215ENST00000476664 CCNKO75909 580 aa4.42□□□□□ -1.7
LRCH3-215ENST00000476664 INAFM2P0DMQ5 153 aa4.42□□□□□ -1.7
LRCH3-215ENST00000476664 NPPCP23582 126 aa4.42□□□□□ -1.7
LRCH3-215ENST00000476664 BTG2P78543 158 aa4.42□□□□□ -1.7
LRCH3-215ENST00000476664 OR8G1Q15617 311 aa4.42□□□□□ -1.7
LRCH3-215ENST00000476664 MRPL51Q4U2R6 128 aaKnown RBP4.42□□□□□ -1.7
LRCH3-215ENST00000476664 DAND5Q8N907 189 aa4.42□□□□□ -1.7
LRCH3-215ENST00000476664 OR4D11Q8NGI4 311 aa4.42□□□□□ -1.7
LRCH3-215ENST00000476664 OR13C4Q8NGS5 318 aa4.42□□□□□ -1.7
LRCH3-215ENST00000476664 RNASE11Q8TAA1 199 aaKnown RBP4.42□□□□□ -1.7
LRCH3-215ENST00000476664 THEM6Q8WUY1 208 aa4.42□□□□□ -1.7
LRCH3-215ENST00000476664 CCDC115Q96NT0 180 aa4.42□□□□□ -1.7
LRCH3-215ENST00000476664 PFDN5Q99471 154 aa4.42□□□□□ -1.7
LRCH3-215ENST00000476664 RNF5Q99942 180 aa4.42□□□□□ -1.7
LRCH3-215ENST00000476664 HEATR1Q9H583 2144 aaKnown RBP4.42□□□□□ -1.7
LRCH3-215ENST00000476664 DUXBA0A1W2PPF3 345 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 A6NED7 52 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 A8MWP4 228 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 TXNDC9O14530 226 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 DEGS1O15121 323 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 NDUFA2O43678 99 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 SH2D1AO60880 128 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 ZNF324O75467 553 aaPredicted RBP4.41□□□□□ -1.7
LRCH3-215ENST00000476664 IGHV3-30-3P0DP02 117 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 GPX2P18283 190 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 AKR1C3P42330 323 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 PIGPP57054 158 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 RPS28P62857 69 aaKnown RBP4.41□□□□□ -1.7
LRCH3-215ENST00000476664 LTC4SQ16873 150 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 SMIM21Q3B7S5 101 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 RPL22L1Q6P5R6 122 aaKnown RBP4.41□□□□□ -1.7
LRCH3-215ENST00000476664 ANGPTL5Q86XS5 388 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 EXOC3-AS1Q8N2X6 119 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 DOHHQ9BU89 302 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 LINC00574Q9H8X3 128 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 PAIP2BQ9ULR5 123 aaKnown RBP4.41□□□□□ -1.7
LRCH3-215ENST00000476664 SNX12Q9UMY4 172 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 LINC00588Q9Y4M8 146 aa4.41□□□□□ -1.7
LRCH3-215ENST00000476664 TRBV24-1A0A075B6N3 115 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 IGKV3D-11A0A0A0MRZ8 115 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 ZNF860A6NHJ4 632 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 I3L521 148 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 BET1O15155 118 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 NDUFB2O95178 105 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 IGKV1D-33P01593 117 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 IGKV1-33P01594 117 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 TRGV3P03979 118 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 BPGMP07738 259 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 LINC00869P0C866 280 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 HIST1H2BOP23527 126 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 S100A7P31151 101 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 HIST1H2BBP33778 126 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 HIST1H2BDP58876 126 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 TSPEAR-AS2P59090 65 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 HIST1H2BCP62807 126 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 RPL30P62888 115 aaKnown RBP4.4□□□□□ -1.71
LRCH3-215ENST00000476664 CCL20P78556 96 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 ZNF79Q15937 498 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 HIST2H2BEQ16778 126 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 ZNF791Q3KP31 576 aaPredicted RBP4.4□□□□□ -1.71
LRCH3-215ENST00000476664 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.4□□□□□ -1.71
LRCH3-215ENST00000476664 C10orf91Q5T1B1 145 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 SSX8Q7RTT4 187 aa4.4□□□□□ -1.71
LRCH3-215ENST00000476664 C3orf22Q8N5N4 141 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms