RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 ICAM4Q14773 271 aa11.91□□□□□ -0.5
PCOLCE-205ENST00000472348 CCDC28AQ8IWP9 274 aa11.91□□□□□ -0.5
PCOLCE-205ENST00000472348 HIST1H2BAQ96A08 127 aa11.91□□□□□ -0.5
PCOLCE-205ENST00000472348 TMPRSS5Q9H3S3 457 aa11.91□□□□□ -0.5
PCOLCE-205ENST00000472348 MEGF8Q7Z7M0 2845 aa11.91□□□□□ -0.5
PCOLCE-205ENST00000472348 PGPA6NDG6 321 aa11.9□□□□□ -0.5
PCOLCE-205ENST00000472348 HLA-DRB4P13762 266 aa11.9□□□□□ -0.5
PCOLCE-205ENST00000472348 CLLU1Q5K131 121 aa11.9□□□□□ -0.5
PCOLCE-205ENST00000472348 EBLN2Q6P2I7 272 aa11.9□□□□□ -0.5
PCOLCE-205ENST00000472348 RPUSD4Q96CM3 377 aaKnown RBP11.9□□□□□ -0.5
PCOLCE-205ENST00000472348 SMDT1Q9H4I9 107 aa11.9□□□□□ -0.5
PCOLCE-205ENST00000472348 SELENOKQ9Y6D0 94 aa11.9□□□□□ -0.5
PCOLCE-205ENST00000472348 HLA-DRB4X5D2U9 266 aa11.9□□□□□ -0.5
PCOLCE-205ENST00000472348 A0A0J9YX75 114 aa11.89□□□□□ -0.51
PCOLCE-205ENST00000472348 F6UZH7 168 aa11.89□□□□□ -0.51
PCOLCE-205ENST00000472348 EIF3GO75821 320 aaKnown RBP eCLIP11.89□□□□□ -0.51
PCOLCE-205ENST00000472348 IQCF2Q8IXL9 164 aa11.89□□□□□ -0.51
PCOLCE-205ENST00000472348 EXOC3-AS1Q8N2X6 119 aa11.89□□□□□ -0.51
PCOLCE-205ENST00000472348 ZNF738Q8NE65 137 aa11.89□□□□□ -0.51
PCOLCE-205ENST00000472348 OR8A1Q8NGG7 326 aa11.89□□□□□ -0.51
PCOLCE-205ENST00000472348 CMTM2Q8TAZ6 248 aa11.89□□□□□ -0.51
PCOLCE-205ENST00000472348 C20orf173Q96LM9 149 aa11.89□□□□□ -0.51
PCOLCE-205ENST00000472348 LINC00052Q96N35 136 aa11.89□□□□□ -0.51
PCOLCE-205ENST00000472348 ODF3Q96PU9 254 aa11.89□□□□□ -0.51
PCOLCE-205ENST00000472348 AURKAIP1Q9NWT8 199 aaPredicted RBP11.89□□□□□ -0.51
PCOLCE-205ENST00000472348 LENEPQ9Y5L5 61 aa11.89□□□□□ -0.51
PCOLCE-205ENST00000472348 DNAH3Q8TD57 4116 aa11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 NOTCH1P46531 2555 aa11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 KIR2DL5BA0A0G2JN68 375 aa11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 KIR2DL5BA0A0G2JPC4 375 aa11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 GGTLC3B5MD39 225 aa11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 DIRC3C9JPN6 131 aa11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 H3BTX0 84 aa11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 K7EQM0 130 aa11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 SUMO1P63165 101 aaKnown RBP11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 LINC00322Q6ZN03 302 aaPredicted RBP11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 C9orf47Q6ZRZ4 202 aa11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 KIR2DL5AQ8N109 375 aa11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 RNF182Q8N6D2 247 aa11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 KIR2DL5BQ8NHK3 375 aa11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 LINC00477Q96M19 166 aa11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 PRR25Q96S07 402 aa11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 VAX2Q9UIW0 290 aa11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 EPDR1Q9UM22 224 aa11.88□□□□□ -0.51
PCOLCE-205ENST00000472348 NPIPB6E9PJ23 425 aa11.87□□□□□ -0.51
PCOLCE-205ENST00000472348 H3BMM0 161 aa11.87□□□□□ -0.51
PCOLCE-205ENST00000472348 PAGE4O60829 102 aa11.87□□□□□ -0.51
PCOLCE-205ENST00000472348 BCL2P10415 239 aa11.87□□□□□ -0.51
PCOLCE-205ENST00000472348 CCL20P78556 96 aa11.87□□□□□ -0.51
PCOLCE-205ENST00000472348 MEF2BQ02080 365 aaPredicted RBP11.87□□□□□ -0.51
PCOLCE-205ENST00000472348 MORN3Q6PF18 240 aaPredicted RBP11.87□□□□□ -0.51
PCOLCE-205ENST00000472348 TRPT1Q86TN4 253 aaKnown RBP11.87□□□□□ -0.51
PCOLCE-205ENST00000472348 OR10J6PQ8NGY7 276 aa11.87□□□□□ -0.51
PCOLCE-205ENST00000472348 ATG101Q9BSB4 218 aa11.87□□□□□ -0.51
PCOLCE-205ENST00000472348 YTHDF2Q9Y5A9 579 aaKnown RBP11.87□□□□□ -0.51
PCOLCE-205ENST00000472348 M0R3E3 92 aa11.86□□□□□ -0.51
PCOLCE-205ENST00000472348 PDE6DO43924 150 aa11.86□□□□□ -0.51
PCOLCE-205ENST00000472348 TCRAP04437 139 aa11.86□□□□□ -0.51
PCOLCE-205ENST00000472348 S100A9P06702 114 aaKnown RBP11.86□□□□□ -0.51
PCOLCE-205ENST00000472348 SNRPCP09234 159 aaKnown RBP11.86□□□□□ -0.51
PCOLCE-205ENST00000472348 NUTF2P61970 127 aaKnown RBP11.86□□□□□ -0.51
PCOLCE-205ENST00000472348 STHQ8IWL8 128 aa11.86□□□□□ -0.51
PCOLCE-205ENST00000472348 FAM210AQ96ND0 272 aa11.86□□□□□ -0.51
PCOLCE-205ENST00000472348 MED9Q9NWA0 146 aa11.86□□□□□ -0.51
PCOLCE-205ENST00000472348 GNG13Q9P2W3 67 aa11.86□□□□□ -0.51
PCOLCE-205ENST00000472348 TRBV6-1A0A0K0K1D8 114 aa11.85□□□□□ -0.51
PCOLCE-205ENST00000472348 C11orf94C9JXX5 98 aa11.85□□□□□ -0.51
PCOLCE-205ENST00000472348 AMBPP02760 352 aa11.85□□□□□ -0.51
PCOLCE-205ENST00000472348 PRB2P02812 416 aaPredicted RBP11.85□□□□□ -0.51
PCOLCE-205ENST00000472348 IGHV4-30-4P0DP06 118 aa11.85□□□□□ -0.51
PCOLCE-205ENST00000472348 HLA-DMBP28068 263 aa11.85□□□□□ -0.51
PCOLCE-205ENST00000472348 IGFL4Q6B9Z1 124 aa11.85□□□□□ -0.51
PCOLCE-205ENST00000472348 APRG1Q8IVJ8 170 aa11.85□□□□□ -0.51
PCOLCE-205ENST00000472348 CYB561D1Q8N8Q1 229 aa11.85□□□□□ -0.51
PCOLCE-205ENST00000472348 TMEM75Q8N9X5 138 aa11.85□□□□□ -0.51
PCOLCE-205ENST00000472348 C11orf52Q96A22 123 aa11.85□□□□□ -0.51
PCOLCE-205ENST00000472348 CITED4Q96RK1 184 aa11.85□□□□□ -0.51
PCOLCE-205ENST00000472348 KLF12Q9Y4X4 402 aa11.85□□□□□ -0.51
PCOLCE-205ENST00000472348 LOC102724200A0A096LPH7 203 aaPredicted RBP11.84□□□□□ -0.51
PCOLCE-205ENST00000472348 LOC102723971A0A1B0GUV8 181 aa11.84□□□□□ -0.51
PCOLCE-205ENST00000472348 RBFOX3A6NFN3 312 aa11.84□□□□□ -0.51
PCOLCE-205ENST00000472348 TMEM250H0YL14 139 aa11.84□□□□□ -0.51
PCOLCE-205ENST00000472348 UBE2CO00762 179 aa11.84□□□□□ -0.51
PCOLCE-205ENST00000472348 UBE2G2P60604 165 aa11.84□□□□□ -0.51
PCOLCE-205ENST00000472348 ZNF506Q5JVG8 444 aa11.84□□□□□ -0.51
PCOLCE-205ENST00000472348 CST9LP1Q5W188 147 aa11.84□□□□□ -0.51
PCOLCE-205ENST00000472348 DEFB125Q8N687 156 aa11.84□□□□□ -0.51
PCOLCE-205ENST00000472348 C1QTNF4Q9BXJ3 329 aa11.84□□□□□ -0.51
PCOLCE-205ENST00000472348 SRD5A3Q9H8P0 318 aa11.84□□□□□ -0.51
PCOLCE-205ENST00000472348 AGRNO00468 2067 aa11.83□□□□□ -0.51
PCOLCE-205ENST00000472348 ZNF705FA8MVS1 300 aaPredicted RBP11.83□□□□□ -0.52
PCOLCE-205ENST00000472348 K7EIL1 84 aa11.83□□□□□ -0.52
PCOLCE-205ENST00000472348 CNN1P51911 297 aaKnown RBP11.83□□□□□ -0.52
PCOLCE-205ENST00000472348 APOC4P55056 127 aa11.83□□□□□ -0.52
PCOLCE-205ENST00000472348 ACTL10Q5JWF8 245 aa11.83□□□□□ -0.52
PCOLCE-205ENST00000472348 FAM19A4Q96LR4 140 aa11.83□□□□□ -0.52
PCOLCE-205ENST00000472348 TUBA4BQ9H853 241 aa11.83□□□□□ -0.52
PCOLCE-205ENST00000472348 A0A1B0GV50 99 aa11.82□□□□□ -0.52
PCOLCE-205ENST00000472348 RAB19A4D1S5 217 aa11.82□□□□□ -0.52
PCOLCE-205ENST00000472348 PRAC2D3DTV9 90 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms