RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 NFYAP23511 347 aaPredicted RBP3.94□□□□□ -1.78
HDAC3-206ENST00000471968 SDC2P34741 201 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 NUP62P37198 522 aaPredicted RBP3.94□□□□□ -1.78
HDAC3-206ENST00000471968 SSTP61278 116 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 ERVK-16P61578 105 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 RPS11P62280 158 aaKnown RBP eCLIP3.94□□□□□ -1.78
HDAC3-206ENST00000471968 MLANAQ16655 118 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 C1orf100Q5SVJ3 147 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 SAMD13Q5VXD3 122 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 C22orf42Q6IC83 251 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 Q6ZRP5 223 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 ZNF485Q8NCK3 441 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 CLRN3Q8NCR9 226 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 OR5H2Q8NGV7 314 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 OR4X1Q8NH49 305 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 ZNF431Q8TF32 576 aaPredicted RBP3.94□□□□□ -1.78
HDAC3-206ENST00000471968 FAM3DQ96BQ1 224 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 RAB3CQ96E17 227 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 ARHGAP5-AS1Q96IT6 56 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 ATG5Q9H1Y0 275 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 MRPL16Q9NX20 251 aaKnown RBP3.94□□□□□ -1.78
HDAC3-206ENST00000471968 RAB22AQ9UL26 194 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 LSM2Q9Y333 95 aaKnown RBP3.94□□□□□ -1.78
HDAC3-206ENST00000471968 OR2W1Q9Y3N9 320 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 TRAV30A0A087WSZ9 112 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 TRAV1-1A0A0B4J248 108 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 FAM240BA0A1B0GVZ2 78 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 FABP12A6NFH5 140 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 PLA2G10O15496 165 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 RBFOX2O43251 390 aaKnown RBP eCLIP3.93□□□□□ -1.78
HDAC3-206ENST00000471968 LYRM1O43325 122 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 FCGR3AP08637 254 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 PI3P19957 117 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 OPRK1P41145 380 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 FABP5Q01469 135 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 KRTAP19-2Q3LHN2 52 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 PYDC2Q56P42 97 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 GFI1BQ5VTD9 330 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 HACD4Q5VWC8 232 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 SH2D6Q7Z4S9 175 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 EIF4E3Q8N5X7 224 aaKnown RBP3.93□□□□□ -1.78
HDAC3-206ENST00000471968 RNF182Q8N6D2 247 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 C11orf72Q8NBR9 251 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 C12orf57Q99622 126 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 C20orf144Q9BQM9 153 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 PECRQ9BY49 303 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 MED28Q9H204 178 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 NDUFB11Q9NX14 153 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 KLF12Q9Y4X4 402 aa3.93□□□□□ -1.78
HDAC3-206ENST00000471968 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
HDAC3-206ENST00000471968 IGLV1-50A0A075B6I6 118 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 TRAV1-2A0A0B4J238 106 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 TRDV1A0A1B0GX56 115 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 SMIM30A4D0T7 59 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 IFITM5A6NNB3 132 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 INMT-MINDY4F8WBC2 141 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 TSC22D2O75157 780 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 H2AFB1P0C5Y9 115 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 H2AFB2P0C5Z0 115 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 IGLC1P0CG04 106 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 SMIM6P0DI80 62 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 GATA1P15976 413 aaPredicted RBP3.92□□□□□ -1.78
HDAC3-206ENST00000471968 RAB6AP20340 208 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 MEOX2P50222 304 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 CCR6P51684 374 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 TMEM50BP56557 158 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 ERHP84090 104 aaKnown RBP3.92□□□□□ -1.78
HDAC3-206ENST00000471968 MXD1Q05195 221 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 BTN1A1Q13410 526 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 C2orf76Q3KRA6 126 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 ASB16-AS1Q495Z4 193 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 ZNF738Q8NE65 137 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 OR51G1Q8NGK1 321 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 OR1S2Q8NGQ3 325 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 OR10R2Q8NGX6 335 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 DIRAS2Q96HU8 199 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 ZNF479Q96JC4 524 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 C2orf50Q96LR7 162 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 RETNLBQ9BQ08 111 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 SOSTQ9BQB4 213 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 PBDC1Q9BVG4 233 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 PARD6GQ9BYG4 376 aaPredicted RBP3.92□□□□□ -1.78
HDAC3-206ENST00000471968 LPAR5Q9H1C0 372 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 COPZ2Q9P299 210 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 PFDN2Q9UHV9 154 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 SCP2D1Q9UJQ7 156 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 PRNDQ9UKY0 176 aa3.92□□□□□ -1.78
HDAC3-206ENST00000471968 IGHV3-64A0A075B6Q5 118 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 IGKV1D-8A0A087WSZ0 117 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 TMEM272A0A1B0GTI8 110 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 J3KRW8 73 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 SSX5O60225 188 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 S100A8P05109 93 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 CTXN2P0C2S0 81 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 HIST1H1DP16402 221 aaKnown RBP3.91□□□□□ -1.78
HDAC3-206ENST00000471968 OR10J1P30954 320 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 RPS19P39019 145 aaKnown RBP3.91□□□□□ -1.78
HDAC3-206ENST00000471968 INPP1P49441 399 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 UBE2D1P51668 147 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 YPEL3P61236 119 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms