RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 PHYHIPLQ96FC7 376 aa14.36□□□□□ -0.11
HDAC7-220ENST00000471235 RARRES2Q99969 163 aa14.36□□□□□ -0.11
HDAC7-220ENST00000471235 ARPC5LQ9BPX5 153 aa14.36□□□□□ -0.11
HDAC7-220ENST00000471235 A0A0J9YWU9 116 aa14.35□□□□□ -0.11
HDAC7-220ENST00000471235 A0A1W2PPV4 95 aa14.35□□□□□ -0.11
HDAC7-220ENST00000471235 JTBO76095 146 aa14.35□□□□□ -0.11
HDAC7-220ENST00000471235 EXOC3-AS1Q8N2X6 119 aa14.35□□□□□ -0.11
HDAC7-220ENST00000471235 MUC7Q8TAX7 377 aa14.35□□□□□ -0.11
HDAC7-220ENST00000471235 MRPL53Q96EL3 112 aaKnown RBP14.35□□□□□ -0.11
HDAC7-220ENST00000471235 ZNF705EA8MWA4 302 aaPredicted RBP14.34□□□□□ -0.11
HDAC7-220ENST00000471235 M0R3E3 92 aa14.34□□□□□ -0.11
HDAC7-220ENST00000471235 MBP02144 154 aa14.34□□□□□ -0.11
HDAC7-220ENST00000471235 RPP25LQ8N5L8 163 aaKnown RBP14.34□□□□□ -0.11
HDAC7-220ENST00000471235 X6R8D5 127 aa14.34□□□□□ -0.11
HDAC7-220ENST00000471235 A0A0D9SG52 128 aa14.33□□□□□ -0.12
HDAC7-220ENST00000471235 BOLA2-SMG1P6H3BVE0 249 aa14.33□□□□□ -0.12
HDAC7-220ENST00000471235 HMGB3O15347 200 aaKnown RBP14.33□□□□□ -0.12
HDAC7-220ENST00000471235 BCL2L11O43521 198 aa14.33□□□□□ -0.12
HDAC7-220ENST00000471235 SPINK13Q1W4C9 94 aa14.33□□□□□ -0.12
HDAC7-220ENST00000471235 PQLC2Q6ZP29 291 aa14.33□□□□□ -0.12
HDAC7-220ENST00000471235 AAMDCQ9H7C9 122 aa14.33□□□□□ -0.12
HDAC7-220ENST00000471235 PRELID1Q9Y255 219 aa14.33□□□□□ -0.12
HDAC7-220ENST00000471235 M0R2Z0 102 aa14.32□□□□□ -0.12
HDAC7-220ENST00000471235 ICAM4Q14773 271 aa14.32□□□□□ -0.12
HDAC7-220ENST00000471235 Q8NAQ8 132 aa14.32□□□□□ -0.12
HDAC7-220ENST00000471235 OR10J6PQ8NGY7 276 aa14.32□□□□□ -0.12
HDAC7-220ENST00000471235 RAB24Q969Q5 203 aa14.32□□□□□ -0.12
HDAC7-220ENST00000471235 C11orf68Q9H3H3 251 aaKnown RBP14.32□□□□□ -0.12
HDAC7-220ENST00000471235 KANTRA0A1W2PQU2 76 aa14.31□□□□□ -0.12
HDAC7-220ENST00000471235 AMBPP02760 352 aa14.31□□□□□ -0.12
HDAC7-220ENST00000471235 STAG3L2P0CL84 134 aa14.31□□□□□ -0.12
HDAC7-220ENST00000471235 STAG3L3P0CL85 134 aa14.31□□□□□ -0.12
HDAC7-220ENST00000471235 ARL14EPLP0DKL9 152 aa14.31□□□□□ -0.12
HDAC7-220ENST00000471235 ZNF705AQ6ZN79 300 aaPredicted RBP14.31□□□□□ -0.12
HDAC7-220ENST00000471235 SSX7Q7RTT5 188 aa14.31□□□□□ -0.12
HDAC7-220ENST00000471235 AKAP14Q86UN6 197 aa14.31□□□□□ -0.12
HDAC7-220ENST00000471235 NPIPB6E9PJ23 425 aa14.3□□□□□ -0.12
HDAC7-220ENST00000471235 CRXO43186 299 aaPredicted RBP14.3□□□□□ -0.12
HDAC7-220ENST00000471235 BAP18Q8IXM2 172 aa14.3□□□□□ -0.12
HDAC7-220ENST00000471235 IGF2BP2-AS1Q96M15 143 aa14.3□□□□□ -0.12
HDAC7-220ENST00000471235 Q9H3A6 140 aa14.3□□□□□ -0.12
HDAC7-220ENST00000471235 IGHV4-28A0A0C4DH34 117 aa14.29□□□□□ -0.12
HDAC7-220ENST00000471235 A0A1B0GVG6 124 aa14.29□□□□□ -0.12
HDAC7-220ENST00000471235 C3orf84H3BNL1 204 aa14.29□□□□□ -0.12
HDAC7-220ENST00000471235 DEFB4AO15263 64 aa14.29□□□□□ -0.12
HDAC7-220ENST00000471235 INSP01308 110 aa14.29□□□□□ -0.12
HDAC7-220ENST00000471235 C1QBP02746 253 aa14.29□□□□□ -0.12
HDAC7-220ENST00000471235 MIFP14174 115 aa14.29□□□□□ -0.12
HDAC7-220ENST00000471235 ZNF726P1Q15940 193 aa14.29□□□□□ -0.12
HDAC7-220ENST00000471235 TMUB2Q71RG4 321 aa14.29□□□□□ -0.12
HDAC7-220ENST00000471235 C1orf158Q8N1D5 194 aa14.29□□□□□ -0.12
HDAC7-220ENST00000471235 ZNF471Q9BX82 626 aaPredicted RBP14.29□□□□□ -0.12
HDAC7-220ENST00000471235 ACTR3CQ9C0K3 210 aaPredicted RBP14.29□□□□□ -0.12
HDAC7-220ENST00000471235 PPP1R14DQ9NXH3 145 aa14.29□□□□□ -0.12
HDAC7-220ENST00000471235 RANP62826 216 aaKnown RBP14.28□□□□□ -0.12
HDAC7-220ENST00000471235 AKR1C8PQ5T2L2 129 aa14.28□□□□□ -0.12
HDAC7-220ENST00000471235 LYPD1Q8N2G4 141 aa14.28□□□□□ -0.12
HDAC7-220ENST00000471235 IL17DQ8TAD2 202 aa14.28□□□□□ -0.12
HDAC7-220ENST00000471235 GOLT1BQ9Y3E0 138 aa14.28□□□□□ -0.12
HDAC7-220ENST00000471235 TRAV12-2A0A075B6T6 113 aa14.27□□□□□ -0.13
HDAC7-220ENST00000471235 IGHV3OR16-12A0A075B7B8 117 aa14.27□□□□□ -0.13
HDAC7-220ENST00000471235 IGKV2-40A0A087WW87 121 aaPredicted RBP14.27□□□□□ -0.13
HDAC7-220ENST00000471235 PFDN1O60925 122 aa14.27□□□□□ -0.13
HDAC7-220ENST00000471235 IGKV2D-40P01614 121 aaPredicted RBP14.27□□□□□ -0.13
HDAC7-220ENST00000471235 RBMY1A1P0DJD3 496 aaKnown RBP14.27□□□□□ -0.13
HDAC7-220ENST00000471235 RBMY1CP0DJD4 496 aa14.27□□□□□ -0.13
HDAC7-220ENST00000471235 GCHFRP30047 84 aa14.27□□□□□ -0.13
HDAC7-220ENST00000471235 CD300CQ08708 224 aa14.27□□□□□ -0.13
HDAC7-220ENST00000471235 ERCC8Q13216 396 aa14.27□□□□□ -0.13
HDAC7-220ENST00000471235 RBMY1FQ15415 496 aaKnown RBP14.27□□□□□ -0.13
HDAC7-220ENST00000471235 ZFAND6Q6FIF0 208 aa14.27□□□□□ -0.13
HDAC7-220ENST00000471235 STARD9Q9P2P6 4700 aa14.26□□□□□ -0.13
HDAC7-220ENST00000471235 CTXND1A0A1B0GTU2 59 aa14.26□□□□□ -0.13
HDAC7-220ENST00000471235 CT45A10P0DMU9 189 aa14.26□□□□□ -0.13
HDAC7-220ENST00000471235 ODF3Q96PU9 254 aa14.26□□□□□ -0.13
HDAC7-220ENST00000471235 NEU1Q99519 415 aa14.26□□□□□ -0.13
HDAC7-220ENST00000471235 OTORQ9NRC9 128 aa14.26□□□□□ -0.13
HDAC7-220ENST00000471235 CXorf1O96002 111 aa14.25□□□□□ -0.13
HDAC7-220ENST00000471235 CDKN1BP46527 198 aa14.25□□□□□ -0.13
HDAC7-220ENST00000471235 LGALSLQ3ZCW2 172 aaPredicted RBP14.25□□□□□ -0.13
HDAC7-220ENST00000471235 SUN5Q8TC36 379 aa14.25□□□□□ -0.13
HDAC7-220ENST00000471235 SEC11BP0C7V7 166 aa14.24□□□□□ -0.13
HDAC7-220ENST00000471235 KIR3DS1Q14943 382 aa14.24□□□□□ -0.13
HDAC7-220ENST00000471235 CASC10Q5T4H9 136 aa14.24□□□□□ -0.13
HDAC7-220ENST00000471235 C9orf47Q6ZRZ4 202 aa14.24□□□□□ -0.13
HDAC7-220ENST00000471235 HYLS1Q96M11 299 aa14.24□□□□□ -0.13
HDAC7-220ENST00000471235 VGLL1Q99990 258 aa14.24□□□□□ -0.13
HDAC7-220ENST00000471235 AGPAT4-IT1Q9H0P7 198 aa14.24□□□□□ -0.13
HDAC7-220ENST00000471235 PLA2G2EQ9NZK7 142 aa14.24□□□□□ -0.13
HDAC7-220ENST00000471235 CSMD3Q7Z407 3707 aa14.24□□□□□ -0.13
HDAC7-220ENST00000471235 SMIM9A6NGZ8 99 aa14.23□□□□□ -0.13
HDAC7-220ENST00000471235 TSPOP30536 169 aa14.23□□□□□ -0.13
HDAC7-220ENST00000471235 LEPP41159 167 aa14.23□□□□□ -0.13
HDAC7-220ENST00000471235 CSN1S1P47710 185 aa14.23□□□□□ -0.13
HDAC7-220ENST00000471235 EIF5AP63241 154 aaKnown RBP14.23□□□□□ -0.13
HDAC7-220ENST00000471235 STOML3Q8TAV4 291 aa14.23□□□□□ -0.13
HDAC7-220ENST00000471235 TMEM208Q9BTX3 173 aa14.23□□□□□ -0.13
HDAC7-220ENST00000471235 TMEM167BQ9NRX6 74 aa14.23□□□□□ -0.13
HDAC7-220ENST00000471235 PGPA6NDG6 321 aa14.22□□□□□ -0.13
HDAC7-220ENST00000471235 TPT1P13693 172 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 230.6 ms