RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 DEFB131BA0A096LNP1 70 aa11.24□□□□□ -0.61
HDAC6-218ENST00000470942 ZNF705GA8MUZ8 300 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-218ENST00000470942 IFNA5P01569 189 aa11.24□□□□□ -0.61
HDAC6-218ENST00000470942 PYYP10082 97 aa11.24□□□□□ -0.61
HDAC6-218ENST00000470942 FAM222AQ5U5X8 452 aa11.24□□□□□ -0.61
HDAC6-218ENST00000470942 TMEM14CQ9P0S9 112 aa11.24□□□□□ -0.61
HDAC6-218ENST00000470942 TIMM9Q9Y5J7 89 aa11.24□□□□□ -0.61
HDAC6-218ENST00000470942 TRBV19A0A075B6N1 114 aa11.23□□□□□ -0.61
HDAC6-218ENST00000470942 TEX48A0A1B0GUV7 120 aa11.23□□□□□ -0.61
HDAC6-218ENST00000470942 PRM2P04554 102 aa11.23□□□□□ -0.61
HDAC6-218ENST00000470942 HIST1H1EP10412 219 aaKnown RBP11.23□□□□□ -0.61
HDAC6-218ENST00000470942 LGALS9CQ6DKI2 356 aa11.23□□□□□ -0.61
HDAC6-218ENST00000470942 MIR17HGQ75NE6 70 aa11.23□□□□□ -0.61
HDAC6-218ENST00000470942 SCGB1C1Q8TD33 95 aa11.23□□□□□ -0.61
HDAC6-218ENST00000470942 BLNKQ8WV28 456 aa11.23□□□□□ -0.61
HDAC6-218ENST00000470942 LINC01587Q99440 93 aa11.23□□□□□ -0.61
HDAC6-218ENST00000470942 MED28Q9H204 178 aa11.23□□□□□ -0.61
HDAC6-218ENST00000470942 DKK2Q9UBU2 259 aa11.23□□□□□ -0.61
HDAC6-218ENST00000470942 APLNQ9ULZ1 77 aa11.23□□□□□ -0.61
HDAC6-218ENST00000470942 YTHDF2Q9Y5A9 579 aaKnown RBP11.23□□□□□ -0.61
HDAC6-218ENST00000470942 IGHV4-4A0A075B6R2 117 aa11.22□□□□□ -0.61
HDAC6-218ENST00000470942 ZNF253O75346 499 aa11.22□□□□□ -0.61
HDAC6-218ENST00000470942 CDKN1BP46527 198 aa11.22□□□□□ -0.61
HDAC6-218ENST00000470942 RPP25LQ8N5L8 163 aaKnown RBP11.22□□□□□ -0.61
HDAC6-218ENST00000470942 NIPSNAP3BQ9BS92 247 aa11.22□□□□□ -0.61
HDAC6-218ENST00000470942 SLC25A2Q9BXI2 301 aa11.22□□□□□ -0.61
HDAC6-218ENST00000470942 PARD6GQ9BYG4 376 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-218ENST00000470942 PLA2G2EQ9NZK7 142 aa11.22□□□□□ -0.61
HDAC6-218ENST00000470942 HTN1P15515 57 aa11.21□□□□□ -0.61
HDAC6-218ENST00000470942 TSPOP30536 169 aa11.21□□□□□ -0.61
HDAC6-218ENST00000470942 FCN2Q15485 313 aa11.21□□□□□ -0.61
HDAC6-218ENST00000470942 FFAR4Q5NUL3 377 aa11.21□□□□□ -0.61
HDAC6-218ENST00000470942 TMEM256Q8N2U0 113 aa11.21□□□□□ -0.61
HDAC6-218ENST00000470942 MRPL32Q9BYC8 188 aaKnown RBP11.21□□□□□ -0.61
HDAC6-218ENST00000470942 OR51M1Q9H341 326 aa11.21□□□□□ -0.61
HDAC6-218ENST00000470942 FUT9Q9Y231 359 aa11.21□□□□□ -0.61
HDAC6-218ENST00000470942 M0R3E3 92 aa11.2□□□□□ -0.62
HDAC6-218ENST00000470942 NDUFB4O95168 129 aa11.2□□□□□ -0.62
HDAC6-218ENST00000470942 PDE6HQ13956 83 aa11.2□□□□□ -0.62
HDAC6-218ENST00000470942 FAM167A-AS1Q96KT0 104 aa11.2□□□□□ -0.62
HDAC6-218ENST00000470942 PAXXQ9BUH6 204 aa11.2□□□□□ -0.62
HDAC6-218ENST00000470942 AAMDCQ9H7C9 122 aa11.2□□□□□ -0.62
HDAC6-218ENST00000470942 PRELID1Q9Y255 219 aa11.2□□□□□ -0.62
HDAC6-218ENST00000470942 J3KRW8 73 aa11.19□□□□□ -0.62
HDAC6-218ENST00000470942 NBEAP1P0C6P0 100 aa11.19□□□□□ -0.62
HDAC6-218ENST00000470942 CT45A10P0DMU9 189 aa11.19□□□□□ -0.62
HDAC6-218ENST00000470942 HTN3P15516 51 aa11.19□□□□□ -0.62
HDAC6-218ENST00000470942 AZU1P20160 251 aa11.19□□□□□ -0.62
HDAC6-218ENST00000470942 DAD1P61803 113 aa11.19□□□□□ -0.62
HDAC6-218ENST00000470942 KIR3DS1Q14943 382 aa11.19□□□□□ -0.62
HDAC6-218ENST00000470942 EXOC3-AS1Q8N2X6 119 aa11.19□□□□□ -0.62
HDAC6-218ENST00000470942 MRPL53Q96EL3 112 aaKnown RBP11.19□□□□□ -0.62
HDAC6-218ENST00000470942 WFDC1Q9HC57 220 aa11.19□□□□□ -0.62
HDAC6-218ENST00000470942 NPIPB6E9PJ23 425 aa11.18□□□□□ -0.62
HDAC6-218ENST00000470942 OR7C2O60412 319 aa11.18□□□□□ -0.62
HDAC6-218ENST00000470942 OR10J4P0C629 311 aa11.18□□□□□ -0.62
HDAC6-218ENST00000470942 LEPP41159 167 aa11.18□□□□□ -0.62
HDAC6-218ENST00000470942 TAS2R60P59551 318 aa11.18□□□□□ -0.62
HDAC6-218ENST00000470942 ERCC8Q13216 396 aa11.18□□□□□ -0.62
HDAC6-218ENST00000470942 ICAM4Q14773 271 aa11.18□□□□□ -0.62
HDAC6-218ENST00000470942 OXA1LQ15070 435 aa11.18□□□□□ -0.62
HDAC6-218ENST00000470942 RNF141Q8WVD5 230 aa11.18□□□□□ -0.62
HDAC6-218ENST00000470942 NDUFAF3Q9BU61 184 aa11.18□□□□□ -0.62
HDAC6-218ENST00000470942 GFI1BQ5VTD9 330 aa11.17□□□□□ -0.62
HDAC6-218ENST00000470942 FAM122CQ6P4D5 195 aa11.17□□□□□ -0.62
HDAC6-218ENST00000470942 C20orf144Q9BQM9 153 aa11.17□□□□□ -0.62
HDAC6-218ENST00000470942 LYRM9A8MSI8 78 aa11.16□□□□□ -0.62
HDAC6-218ENST00000470942 H7BYZ3 331 aa11.16□□□□□ -0.62
HDAC6-218ENST00000470942 FXYD5Q96DB9 178 aa11.16□□□□□ -0.62
HDAC6-218ENST00000470942 C16orf74Q96GX8 76 aa11.16□□□□□ -0.62
HDAC6-218ENST00000470942 ODF3Q96PU9 254 aa11.16□□□□□ -0.62
HDAC6-218ENST00000470942 KMT2AQ03164 3969 aa11.15□□□□□ -0.62
HDAC6-218ENST00000470942 VPS13DQ5THJ4 4388 aa11.15□□□□□ -0.62
HDAC6-218ENST00000470942 TRAV12-3A0A0B4J271 114 aa11.15□□□□□ -0.62
HDAC6-218ENST00000470942 DEFB130BP0DP73 79 aa11.15□□□□□ -0.62
HDAC6-218ENST00000470942 DEFB130AP0DP74 79 aa11.15□□□□□ -0.62
HDAC6-218ENST00000470942 TAS2R45P59539 299 aa11.15□□□□□ -0.62
HDAC6-218ENST00000470942 UBE2L3P68036 154 aaKnown RBP11.15□□□□□ -0.62
HDAC6-218ENST00000470942 RGS21Q2M5E4 152 aa11.15□□□□□ -0.62
HDAC6-218ENST00000470942 ACOT6Q3I5F7 207 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-218ENST00000470942 KHDC3LQ587J8 217 aa11.15□□□□□ -0.62
HDAC6-218ENST00000470942 CCDC28AQ8IWP9 274 aa11.15□□□□□ -0.62
HDAC6-218ENST00000470942 PHYHIPLQ96FC7 376 aa11.15□□□□□ -0.62
HDAC6-218ENST00000470942 LINC00477Q96M19 166 aa11.15□□□□□ -0.62
HDAC6-218ENST00000470942 PLAC8L1A1L4L8 177 aa11.14□□□□□ -0.63
HDAC6-218ENST00000470942 EIF3GO75821 320 aaKnown RBP eCLIP11.14□□□□□ -0.63
HDAC6-218ENST00000470942 GIPP09681 153 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-218ENST00000470942 RANP62826 216 aaKnown RBP11.14□□□□□ -0.63
HDAC6-218ENST00000470942 TMEM78Q5T7P6 136 aa11.14□□□□□ -0.63
HDAC6-218ENST00000470942 ZNF493Q6ZR52 646 aa11.14□□□□□ -0.63
HDAC6-218ENST00000470942 AGPAT4-IT1Q9H0P7 198 aa11.14□□□□□ -0.63
HDAC6-218ENST00000470942 IGKV2-40A0A087WW87 121 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-218ENST00000470942 A0A1W2PPV4 95 aa11.13□□□□□ -0.63
HDAC6-218ENST00000470942 IGKV2D-40P01614 121 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-218ENST00000470942 SLC25A5P05141 298 aaKnown RBP11.13□□□□□ -0.63
HDAC6-218ENST00000470942 M6PRP20645 277 aa11.13□□□□□ -0.63
HDAC6-218ENST00000470942 Q5BKY6 102 aa11.13□□□□□ -0.63
HDAC6-218ENST00000470942 HSD17B11Q8NBQ5 300 aa11.13□□□□□ -0.63
HDAC6-218ENST00000470942 TMEM263Q8WUH6 116 aaKnown RBP11.13□□□□□ -0.63
HDAC6-218ENST00000470942 ASB13Q8WXK3 278 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms