RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 TSKUQ8WUA8 353 aa14.1□□□□□ -0.15
COL9A3-205ENST00000466192 SNHG12Q9BXW3 62 aa14.1□□□□□ -0.15
COL9A3-205ENST00000466192 CCDC168Q8NDH2 2452 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 HIGD1CA8MV81 97 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 DIRC3C9JPN6 131 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 K7EQM0 130 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 P01737 135 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 C9orf139Q6ZV77 190 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 TMEM256Q8N2U0 113 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 TMEM75Q8N9X5 138 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 DAZAP1Q96EP5 407 aaKnown RBP14.09□□□□□ -0.15
COL9A3-205ENST00000466192 ATP6V0BQ99437 205 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 KLK15Q9H2R5 256 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 SMAD5-AS1Q9Y6J3 95 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 TLN2Q9Y4G6 2542 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 C19orf71A6NCJ1 209 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 H3BUA1 57 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 RAB4AP20338 218 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 IQCJQ1A5X6 159 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 TMEM18Q96B42 140 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 PRSS22Q9GZN4 317 aa14.09□□□□□ -0.15
COL9A3-205ENST00000466192 RPP21Q9H633 154 aaKnown RBP14.09□□□□□ -0.15
COL9A3-205ENST00000466192 ITPR2Q14571 2701 aa14.08□□□□□ -0.16
COL9A3-205ENST00000466192 PSG3Q16557 428 aa14.08□□□□□ -0.16
COL9A3-205ENST00000466192 TMEM95Q3KNT9 176 aa14.08□□□□□ -0.16
COL9A3-205ENST00000466192 CYB5R2Q6BCY4 276 aa14.08□□□□□ -0.16
COL9A3-205ENST00000466192 ZNF492Q9P255 531 aa14.08□□□□□ -0.16
COL9A3-205ENST00000466192 M0R143 59 aa14.07□□□□□ -0.16
COL9A3-205ENST00000466192 BUB3O43684 328 aa14.07□□□□□ -0.16
COL9A3-205ENST00000466192 IGLV1-40P01703 118 aa14.07□□□□□ -0.16
COL9A3-205ENST00000466192 MT-ND6P03923 174 aa14.07□□□□□ -0.16
COL9A3-205ENST00000466192 CRISP2P16562 243 aa14.07□□□□□ -0.16
COL9A3-205ENST00000466192 CFHR3Q02985 330 aa14.07□□□□□ -0.16
COL9A3-205ENST00000466192 KIAA1644Q3SXP7 199 aa14.07□□□□□ -0.16
COL9A3-205ENST00000466192 TCF24Q7RTU0 167 aa14.07□□□□□ -0.16
COL9A3-205ENST00000466192 WFDC11Q8NEX6 87 aa14.07□□□□□ -0.16
COL9A3-205ENST00000466192 ZNF331Q9NQX6 463 aaPredicted RBP14.07□□□□□ -0.16
COL9A3-205ENST00000466192 PSG8Q9UQ74 426 aa14.07□□□□□ -0.16
COL9A3-205ENST00000466192 IGHV3-66A0A0C4DH42 116 aa14.07□□□□□ -0.16
COL9A3-205ENST00000466192 NUPR1O60356 82 aa14.07□□□□□ -0.16
COL9A3-205ENST00000466192 TRBV12-3P01733 135 aa14.07□□□□□ -0.16
COL9A3-205ENST00000466192 PF4V1P10720 104 aa14.07□□□□□ -0.16
COL9A3-205ENST00000466192 PSG9Q00887 426 aa14.07□□□□□ -0.16
COL9A3-205ENST00000466192 LCNL1Q6ZST4 164 aa14.07□□□□□ -0.16
COL9A3-205ENST00000466192 TMEM190Q8WZ59 177 aa14.07□□□□□ -0.16
COL9A3-205ENST00000466192 S100A7P31151 101 aa14.06□□□□□ -0.16
COL9A3-205ENST00000466192 COX19Q49B96 90 aa14.06□□□□□ -0.16
COL9A3-205ENST00000466192 Q6YL49 198 aa14.06□□□□□ -0.16
COL9A3-205ENST00000466192 GBGT1Q8N5D6 347 aa14.06□□□□□ -0.16
COL9A3-205ENST00000466192 USMG5Q96IX5 58 aa14.06□□□□□ -0.16
COL9A3-205ENST00000466192 FLNAP21333 2647 aaKnown RBP14.06□□□□□ -0.16
COL9A3-205ENST00000466192 IGHV3OR16-13A0A075B7E8 117 aa14.06□□□□□ -0.16
COL9A3-205ENST00000466192 IGHV3-74A0A0B4J1X5 117 aa14.06□□□□□ -0.16
COL9A3-205ENST00000466192 TRBV6-1A0A0K0K1D8 114 aa14.06□□□□□ -0.16
COL9A3-205ENST00000466192 APOHP02749 345 aaPredicted RBP14.06□□□□□ -0.16
COL9A3-205ENST00000466192 G0S2P27469 103 aa14.06□□□□□ -0.16
COL9A3-205ENST00000466192 ARL3P36405 182 aa14.06□□□□□ -0.16
COL9A3-205ENST00000466192 CSN1S1P47710 185 aa14.06□□□□□ -0.16
COL9A3-205ENST00000466192 IGFL4Q6B9Z1 124 aa14.06□□□□□ -0.16
COL9A3-205ENST00000466192 ZC2HC1AQ96GY0 325 aa14.06□□□□□ -0.16
COL9A3-205ENST00000466192 ZFP30Q9Y2G7 519 aa14.06□□□□□ -0.16
COL9A3-205ENST00000466192 A8MWL6 223 aa14.05□□□□□ -0.16
COL9A3-205ENST00000466192 ZNF207O43670 478 aaKnown RBP14.05□□□□□ -0.16
COL9A3-205ENST00000466192 IGHV3-11P01762 117 aa14.05□□□□□ -0.16
COL9A3-205ENST00000466192 HLA-DQA1P01909 254 aa14.05□□□□□ -0.16
COL9A3-205ENST00000466192 VPREB3Q9UKI3 123 aa14.05□□□□□ -0.16
COL9A3-205ENST00000466192 TP53TG3Q9ULZ0 132 aa14.05□□□□□ -0.16
COL9A3-205ENST00000466192 GCN1Q92616 2671 aaKnown RBP14.05□□□□□ -0.16
COL9A3-205ENST00000466192 ZNF785A8K8V0 405 aa14.05□□□□□ -0.16
COL9A3-205ENST00000466192 GTSF1Q8WW33 167 aa14.05□□□□□ -0.16
COL9A3-205ENST00000466192 ZNF580Q9UK33 172 aa14.05□□□□□ -0.16
COL9A3-205ENST00000466192 IGHV3-49A0A0A0MS15 119 aa14.04□□□□□ -0.16
COL9A3-205ENST00000466192 CT83Q5H943 113 aa14.04□□□□□ -0.16
COL9A3-205ENST00000466192 C1orf194Q5T5A4 169 aa14.04□□□□□ -0.16
COL9A3-205ENST00000466192 IGKV2-40A0A087WW87 121 aaPredicted RBP14.03□□□□□ -0.16
COL9A3-205ENST00000466192 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.03□□□□□ -0.16
COL9A3-205ENST00000466192 KIR2DL5BA0A0G2JN68 375 aa14.03□□□□□ -0.16
COL9A3-205ENST00000466192 KIR2DL5BA0A0G2JPC4 375 aa14.03□□□□□ -0.16
COL9A3-205ENST00000466192 IGKV2D-40P01614 121 aaPredicted RBP14.03□□□□□ -0.16
COL9A3-205ENST00000466192 HLA-DMBP28068 263 aa14.03□□□□□ -0.16
COL9A3-205ENST00000466192 CAMPP49913 170 aa14.03□□□□□ -0.16
COL9A3-205ENST00000466192 RAB9AP51151 201 aa14.03□□□□□ -0.16
COL9A3-205ENST00000466192 SLAQ13239 276 aa14.03□□□□□ -0.16
COL9A3-205ENST00000466192 MRPL52Q86TS9 123 aaKnown RBP14.03□□□□□ -0.16
COL9A3-205ENST00000466192 KIR2DL5AQ8N109 375 aa14.03□□□□□ -0.16
COL9A3-205ENST00000466192 WIPF2Q8TF74 440 aaPredicted RBP14.03□□□□□ -0.16
COL9A3-205ENST00000466192 METTL26Q96S19 204 aa14.03□□□□□ -0.16
COL9A3-205ENST00000466192 NPIPB6E9PJ23 425 aa14.03□□□□□ -0.16
COL9A3-205ENST00000466192 F2Z2F3 143 aa14.03□□□□□ -0.16
COL9A3-205ENST00000466192 APCSP02743 223 aa14.03□□□□□ -0.16
COL9A3-205ENST00000466192 GDF5OSQ5U4N7 250 aa14.03□□□□□ -0.16
COL9A3-205ENST00000466192 RASL11AQ6T310 242 aa14.03□□□□□ -0.16
COL9A3-205ENST00000466192 BAGE3Q86Y29 109 aa14.03□□□□□ -0.16
COL9A3-205ENST00000466192 U3KQE9 123 aa14.03□□□□□ -0.16
COL9A3-205ENST00000466192 CHEK1O14757 476 aa14.02□□□□□ -0.16
COL9A3-205ENST00000466192 HOXA3O43365 443 aaPredicted RBP14.02□□□□□ -0.16
COL9A3-205ENST00000466192 ZNF25P17030 456 aaPredicted RBP14.02□□□□□ -0.16
COL9A3-205ENST00000466192 OR2D3Q8NGH3 330 aa14.02□□□□□ -0.16
COL9A3-205ENST00000466192 PGLYRP4Q96LB8 373 aa14.02□□□□□ -0.16
COL9A3-205ENST00000466192 C8orf49Q96NF6 230 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms