RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 RPP25LQ8N5L8 163 aaKnown RBP10.57□□□□□ -0.72
SQSTM1-205ENST00000464493 SLC35B3Q9H1N7 401 aa10.57□□□□□ -0.72
SQSTM1-205ENST00000464493 PRAC2D3DTV9 90 aa10.56□□□□□ -0.72
SQSTM1-205ENST00000464493 UBE2L3P68036 154 aaKnown RBP10.56□□□□□ -0.72
SQSTM1-205ENST00000464493 AMTNQ6UX39 209 aa10.56□□□□□ -0.72
SQSTM1-205ENST00000464493 EXOC3-AS1Q8N2X6 119 aa10.56□□□□□ -0.72
SQSTM1-205ENST00000464493 MRPL53Q96EL3 112 aaKnown RBP10.56□□□□□ -0.72
SQSTM1-205ENST00000464493 AAMDCQ9H7C9 122 aa10.56□□□□□ -0.72
SQSTM1-205ENST00000464493 PRELID1Q9Y255 219 aa10.56□□□□□ -0.72
SQSTM1-205ENST00000464493 A0A0J9YWU9 116 aa10.55□□□□□ -0.72
SQSTM1-205ENST00000464493 KANTRA0A1W2PQU2 76 aa10.55□□□□□ -0.72
SQSTM1-205ENST00000464493 HMGB3O15347 200 aaKnown RBP10.55□□□□□ -0.72
SQSTM1-205ENST00000464493 CDC34P49427 236 aaPredicted RBP10.55□□□□□ -0.72
SQSTM1-205ENST00000464493 PQLC2Q6ZP29 291 aa10.55□□□□□ -0.72
SQSTM1-205ENST00000464493 OR10J6PQ8NGY7 276 aa10.55□□□□□ -0.72
SQSTM1-205ENST00000464493 PPP1R14DQ9NXH3 145 aa10.55□□□□□ -0.72
SQSTM1-205ENST00000464493 DNAH7Q8WXX0 4024 aa10.55□□□□□ -0.72
SQSTM1-205ENST00000464493 ZNF705EA8MWA4 302 aaPredicted RBP10.54□□□□□ -0.72
SQSTM1-205ENST00000464493 M0R3E3 92 aa10.54□□□□□ -0.72
SQSTM1-205ENST00000464493 BCL2L11O43521 198 aa10.54□□□□□ -0.72
SQSTM1-205ENST00000464493 RANP62826 216 aaKnown RBP10.54□□□□□ -0.72
SQSTM1-205ENST00000464493 ICAM4Q14773 271 aa10.54□□□□□ -0.72
SQSTM1-205ENST00000464493 AKAP14Q86UN6 197 aa10.54□□□□□ -0.72
SQSTM1-205ENST00000464493 LYPD1Q8N2G4 141 aa10.54□□□□□ -0.72
SQSTM1-205ENST00000464493 MUC7Q8TAX7 377 aa10.54□□□□□ -0.72
SQSTM1-205ENST00000464493 RAB24Q969Q5 203 aa10.54□□□□□ -0.72
SQSTM1-205ENST00000464493 PHYHIPLQ96FC7 376 aa10.54□□□□□ -0.72
SQSTM1-205ENST00000464493 ACTR3CQ9C0K3 210 aaPredicted RBP10.54□□□□□ -0.72
SQSTM1-205ENST00000464493 M0R2Z0 102 aa10.53□□□□□ -0.72
SQSTM1-205ENST00000464493 C1QBP02746 253 aa10.53□□□□□ -0.72
SQSTM1-205ENST00000464493 AMBPP02760 352 aa10.53□□□□□ -0.72
SQSTM1-205ENST00000464493 STAG3L2P0CL84 134 aa10.53□□□□□ -0.72
SQSTM1-205ENST00000464493 STAG3L3P0CL85 134 aa10.53□□□□□ -0.72
SQSTM1-205ENST00000464493 SPINK13Q1W4C9 94 aa10.53□□□□□ -0.72
SQSTM1-205ENST00000464493 AKR1C8PQ5T2L2 129 aa10.53□□□□□ -0.72
SQSTM1-205ENST00000464493 TMUB2Q71RG4 321 aa10.53□□□□□ -0.72
SQSTM1-205ENST00000464493 ZNF471Q9BX82 626 aaPredicted RBP10.53□□□□□ -0.72
SQSTM1-205ENST00000464493 BOLA2-SMG1P6H3BVE0 249 aa10.52□□□□□ -0.73
SQSTM1-205ENST00000464493 PFDN1O60925 122 aa10.52□□□□□ -0.73
SQSTM1-205ENST00000464493 ARL14EPLP0DKL9 152 aa10.52□□□□□ -0.73
SQSTM1-205ENST00000464493 MIFP14174 115 aa10.52□□□□□ -0.73
SQSTM1-205ENST00000464493 IGF2BP2-AS1Q96M15 143 aa10.52□□□□□ -0.73
SQSTM1-205ENST00000464493 Q9H3A6 140 aa10.52□□□□□ -0.73
SQSTM1-205ENST00000464493 X6R8D5 127 aa10.52□□□□□ -0.73
SQSTM1-205ENST00000464493 IGHV3OR16-12A0A075B7B8 117 aa10.51□□□□□ -0.73
SQSTM1-205ENST00000464493 A0A1B0GVG6 124 aa10.51□□□□□ -0.73
SQSTM1-205ENST00000464493 NPIPB6E9PJ23 425 aa10.51□□□□□ -0.73
SQSTM1-205ENST00000464493 C3orf84H3BNL1 204 aa10.51□□□□□ -0.73
SQSTM1-205ENST00000464493 CRXO43186 299 aaPredicted RBP10.51□□□□□ -0.73
SQSTM1-205ENST00000464493 EIF5AP63241 154 aaKnown RBP10.51□□□□□ -0.73
SQSTM1-205ENST00000464493 LGALSLQ3ZCW2 172 aaPredicted RBP10.51□□□□□ -0.73
SQSTM1-205ENST00000464493 ZNF705AQ6ZN79 300 aaPredicted RBP10.51□□□□□ -0.73
SQSTM1-205ENST00000464493 IL17DQ8TAD2 202 aa10.51□□□□□ -0.73
SQSTM1-205ENST00000464493 HYLS1Q96M11 299 aa10.51□□□□□ -0.73
SQSTM1-205ENST00000464493 C11orf68Q9H3H3 251 aaKnown RBP10.51□□□□□ -0.73
SQSTM1-205ENST00000464493 GOLT1BQ9Y3E0 138 aa10.51□□□□□ -0.73
SQSTM1-205ENST00000464493 TRAV12-2A0A075B6T6 113 aa10.5□□□□□ -0.73
SQSTM1-205ENST00000464493 CTXND1A0A1B0GTU2 59 aa10.5□□□□□ -0.73
SQSTM1-205ENST00000464493 DEFB4AO15263 64 aa10.5□□□□□ -0.73
SQSTM1-205ENST00000464493 CXorf1O96002 111 aa10.5□□□□□ -0.73
SQSTM1-205ENST00000464493 SEC11BP0C7V7 166 aa10.5□□□□□ -0.73
SQSTM1-205ENST00000464493 CT45A10P0DMU9 189 aa10.5□□□□□ -0.73
SQSTM1-205ENST00000464493 GCHFRP30047 84 aa10.5□□□□□ -0.73
SQSTM1-205ENST00000464493 CDKN1BP46527 198 aa10.5□□□□□ -0.73
SQSTM1-205ENST00000464493 CSN1S1P47710 185 aa10.5□□□□□ -0.73
SQSTM1-205ENST00000464493 SSX7Q7RTT5 188 aa10.5□□□□□ -0.73
SQSTM1-205ENST00000464493 C1orf158Q8N1D5 194 aa10.5□□□□□ -0.73
SQSTM1-205ENST00000464493 Q8NAQ8 132 aa10.5□□□□□ -0.73
SQSTM1-205ENST00000464493 LINC00477Q96M19 166 aa10.5□□□□□ -0.73
SQSTM1-205ENST00000464493 NEU1Q99519 415 aa10.5□□□□□ -0.73
SQSTM1-205ENST00000464493 OTORQ9NRC9 128 aa10.5□□□□□ -0.73
SQSTM1-205ENST00000464493 IGHV4-28A0A0C4DH34 117 aa10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 PGPA6NDG6 321 aa10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 SMIM9A6NGZ8 99 aa10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 INSP01308 110 aa10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 RBMY1A1P0DJD3 496 aaKnown RBP10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 RBMY1CP0DJD4 496 aa10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 TSPOP30536 169 aa10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 ERCC8Q13216 396 aa10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 RBMY1FQ15415 496 aaKnown RBP10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 ZNF726P1Q15940 193 aa10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 FAM74A1Q5RGS3 127 aa10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 C9orf47Q6ZRZ4 202 aa10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 BAP18Q8IXM2 172 aa10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 SUN5Q8TC36 379 aa10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 RXFP4Q8TDU9 374 aa10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 TMEM208Q9BTX3 173 aa10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 AGPAT4-IT1Q9H0P7 198 aa10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 TMEM167BQ9NRX6 74 aa10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 CSMD3Q7Z407 3707 aa10.49□□□□□ -0.73
SQSTM1-205ENST00000464493 IGKV2-40A0A087WW87 121 aaPredicted RBP10.48□□□□□ -0.73
SQSTM1-205ENST00000464493 IGKV2D-40P01614 121 aaPredicted RBP10.48□□□□□ -0.73
SQSTM1-205ENST00000464493 TPT1P13693 172 aaKnown RBP10.48□□□□□ -0.73
SQSTM1-205ENST00000464493 CD300CQ08708 224 aa10.48□□□□□ -0.73
SQSTM1-205ENST00000464493 ODF3Q96PU9 254 aa10.48□□□□□ -0.73
SQSTM1-205ENST00000464493 UMAD1C9J7I0 102 aa10.47□□□□□ -0.73
SQSTM1-205ENST00000464493 DIRC3C9JPN6 131 aa10.47□□□□□ -0.73
SQSTM1-205ENST00000464493 LEPP41159 167 aa10.47□□□□□ -0.73
SQSTM1-205ENST00000464493 CASC10Q5T4H9 136 aa10.47□□□□□ -0.73
SQSTM1-205ENST00000464493 TMEM78Q5T7P6 136 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms