RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 SLC38A11Q08AI6 406 aa11.85□□□□□ -0.51
HMGN1-210ENST00000464078 LINC00305Q7Z4B0 112 aa11.85□□□□□ -0.51
HMGN1-210ENST00000464078 ZBTB8BQ8NAP8 495 aaPredicted RBP11.85□□□□□ -0.51
HMGN1-210ENST00000464078 MCFD2Q8NI22 146 aa11.85□□□□□ -0.51
HMGN1-210ENST00000464078 PXMP4Q9Y6I8 212 aa11.85□□□□□ -0.51
HMGN1-210ENST00000464078 FLG2Q5D862 2391 aaPredicted RBP11.85□□□□□ -0.51
HMGN1-210ENST00000464078 NPIPB6E9PJ23 425 aa11.84□□□□□ -0.51
HMGN1-210ENST00000464078 EREGO14944 169 aa11.84□□□□□ -0.51
HMGN1-210ENST00000464078 IGLC2P0DOY2 106 aa11.84□□□□□ -0.51
HMGN1-210ENST00000464078 LEPP41159 167 aa11.84□□□□□ -0.51
HMGN1-210ENST00000464078 XGP55808 180 aa11.84□□□□□ -0.51
HMGN1-210ENST00000464078 ERVFC1-1P60608 527 aa11.84□□□□□ -0.51
HMGN1-210ENST00000464078 RRAS2P62070 204 aaPredicted RBP11.84□□□□□ -0.51
HMGN1-210ENST00000464078 MGAT4CQ9UBM8 478 aa11.84□□□□□ -0.51
HMGN1-210ENST00000464078 VPS13BQ7Z7G8 4022 aa11.84□□□□□ -0.51
HMGN1-210ENST00000464078 TRAV12-3A0A0B4J271 114 aa11.83□□□□□ -0.52
HMGN1-210ENST00000464078 LINC00854A0A1B0GVQ3 168 aa11.83□□□□□ -0.52
HMGN1-210ENST00000464078 GOSR2O14653 212 aa11.83□□□□□ -0.52
HMGN1-210ENST00000464078 METTL15P1P0C7V9 234 aa11.83□□□□□ -0.52
HMGN1-210ENST00000464078 CT45A10P0DMU9 189 aa11.83□□□□□ -0.52
HMGN1-210ENST00000464078 C11orf72Q8NBR9 251 aa11.83□□□□□ -0.52
HMGN1-210ENST00000464078 ZNF680Q8NEM1 530 aa11.83□□□□□ -0.52
HMGN1-210ENST00000464078 OR10P1Q8NGE3 313 aa11.83□□□□□ -0.52
HMGN1-210ENST00000464078 V9GYH0 126 aa11.83□□□□□ -0.52
HMGN1-210ENST00000464078 TSC22D2O75157 780 aa11.82□□□□□ -0.52
HMGN1-210ENST00000464078 TAS2R30P59541 319 aa11.82□□□□□ -0.52
HMGN1-210ENST00000464078 Q5VSD8 79 aa11.82□□□□□ -0.52
HMGN1-210ENST00000464078 ZNF431Q8TF32 576 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-210ENST00000464078 SAT2Q96F10 170 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-210ENST00000464078 LINC00467Q9BRT7 94 aa11.82□□□□□ -0.52
HMGN1-210ENST00000464078 GGACTQ9BVM4 153 aa11.82□□□□□ -0.52
HMGN1-210ENST00000464078 TRGV2A0A075B6R0 118 aa11.81□□□□□ -0.52
HMGN1-210ENST00000464078 C9orf170A2RU37 121 aa11.81□□□□□ -0.52
HMGN1-210ENST00000464078 H3BQ15 152 aa11.81□□□□□ -0.52
HMGN1-210ENST00000464078 AGPAT2O15120 278 aa11.81□□□□□ -0.52
HMGN1-210ENST00000464078 COX7A2P2O60397 106 aa11.81□□□□□ -0.52
HMGN1-210ENST00000464078 NXPH4O95158 308 aa11.81□□□□□ -0.52
HMGN1-210ENST00000464078 SNRPCP09234 159 aaKnown RBP11.81□□□□□ -0.52
HMGN1-210ENST00000464078 OPCMLQ14982 345 aa11.81□□□□□ -0.52
HMGN1-210ENST00000464078 GUK1Q16774 197 aa11.81□□□□□ -0.52
HMGN1-210ENST00000464078 PYDC2Q56P42 97 aa11.81□□□□□ -0.52
HMGN1-210ENST00000464078 MORN5Q5VZ52 161 aa11.81□□□□□ -0.52
HMGN1-210ENST00000464078 TMEM37Q8WXS4 190 aa11.81□□□□□ -0.52
HMGN1-210ENST00000464078 H3BMQ9 156 aa11.8□□□□□ -0.52
HMGN1-210ENST00000464078 H3BTX0 84 aa11.8□□□□□ -0.52
HMGN1-210ENST00000464078 ZNF253O75346 499 aa11.8□□□□□ -0.52
HMGN1-210ENST00000464078 SLC25A5P05141 298 aaKnown RBP11.8□□□□□ -0.52
HMGN1-210ENST00000464078 NFE4Q86UQ8 179 aa11.8□□□□□ -0.52
HMGN1-210ENST00000464078 FRZBQ92765 325 aa11.8□□□□□ -0.52
HMGN1-210ENST00000464078 GSN-AS1Q9NRJ2 163 aa11.8□□□□□ -0.52
HMGN1-210ENST00000464078 FUT9Q9Y231 359 aa11.8□□□□□ -0.52
HMGN1-210ENST00000464078 J3KRW8 73 aa11.79□□□□□ -0.52
HMGN1-210ENST00000464078 ANXA2RQ3ZCQ2 193 aa11.79□□□□□ -0.52
HMGN1-210ENST00000464078 C10orf113Q5VZT2 155 aa11.79□□□□□ -0.52
HMGN1-210ENST00000464078 MRPL53Q96EL3 112 aaKnown RBP11.79□□□□□ -0.52
HMGN1-210ENST00000464078 MGST2Q99735 147 aa11.79□□□□□ -0.52
HMGN1-210ENST00000464078 RCL1Q9Y2P8 373 aaKnown RBP11.79□□□□□ -0.52
HMGN1-210ENST00000464078 ICOSQ9Y6W8 199 aa11.79□□□□□ -0.52
HMGN1-210ENST00000464078 C7orf71A4D174 169 aa11.78□□□□□ -0.52
HMGN1-210ENST00000464078 KLLNB2CW77 178 aa11.78□□□□□ -0.52
HMGN1-210ENST00000464078 ZNF324O75467 553 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-210ENST00000464078 ARL16Q0P5N6 197 aa11.78□□□□□ -0.52
HMGN1-210ENST00000464078 ST6GAL2Q96JF0 529 aa11.78□□□□□ -0.52
HMGN1-210ENST00000464078 A0A087WTM6 91 aa11.77□□□□□ -0.53
HMGN1-210ENST00000464078 TRGV1A0A0A0MS02 117 aa11.77□□□□□ -0.53
HMGN1-210ENST00000464078 SPINK4O60575 86 aa11.77□□□□□ -0.53
HMGN1-210ENST00000464078 FUSP35637 526 aaKnown RBP eCLIP11.77□□□□□ -0.53
HMGN1-210ENST00000464078 TCL1AP56279 114 aa11.77□□□□□ -0.53
HMGN1-210ENST00000464078 KRTAP10-1P60331 282 aa11.77□□□□□ -0.53
HMGN1-210ENST00000464078 EIF4E3Q8N5X7 224 aaKnown RBP11.77□□□□□ -0.53
HMGN1-210ENST00000464078 FAM19A4Q96LR4 140 aa11.77□□□□□ -0.53
HMGN1-210ENST00000464078 K7EP13 123 aa11.76□□□□□ -0.53
HMGN1-210ENST00000464078 PAX4O43316 350 aa11.76□□□□□ -0.53
HMGN1-210ENST00000464078 NOL3O60936 208 aaKnown RBP11.76□□□□□ -0.53
HMGN1-210ENST00000464078 NDUFB6O95139 128 aa11.76□□□□□ -0.53
HMGN1-210ENST00000464078 OR4E1P0C645 316 aa11.76□□□□□ -0.53
HMGN1-210ENST00000464078 DNAH10OSP0CZ25 163 aa11.76□□□□□ -0.53
HMGN1-210ENST00000464078 IAH1Q2TAA2 248 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-210ENST00000464078 IBA57Q5T440 356 aaKnown RBP11.76□□□□□ -0.53
HMGN1-210ENST00000464078 DNAJC4Q9NNZ3 241 aa11.76□□□□□ -0.53
HMGN1-210ENST00000464078 C7orf66A4D0T2 115 aa11.75□□□□□ -0.53
HMGN1-210ENST00000464078 SCGB1D2O95969 90 aa11.75□□□□□ -0.53
HMGN1-210ENST00000464078 IFNA5P01569 189 aa11.75□□□□□ -0.53
HMGN1-210ENST00000464078 CAMLGP49069 296 aa11.75□□□□□ -0.53
HMGN1-210ENST00000464078 VGLL1Q99990 258 aa11.75□□□□□ -0.53
HMGN1-210ENST00000464078 PRO0255Q9UI72 69 aa11.75□□□□□ -0.53
HMGN1-210ENST00000464078 NMBP08949 121 aa11.74□□□□□ -0.53
HMGN1-210ENST00000464078 CRISP2P16562 243 aa11.74□□□□□ -0.53
HMGN1-210ENST00000464078 CD300CQ08708 224 aa11.74□□□□□ -0.53
HMGN1-210ENST00000464078 SLAQ13239 276 aa11.74□□□□□ -0.53
HMGN1-210ENST00000464078 RAB31Q13636 194 aa11.74□□□□□ -0.53
HMGN1-210ENST00000464078 ICAM4Q14773 271 aa11.74□□□□□ -0.53
HMGN1-210ENST00000464078 Q6ZRG5 221 aa11.74□□□□□ -0.53
HMGN1-210ENST00000464078 PFDN5Q99471 154 aa11.74□□□□□ -0.53
HMGN1-210ENST00000464078 KLF12Q9Y4X4 402 aa11.74□□□□□ -0.53
HMGN1-210ENST00000464078 TNFRSF18Q9Y5U5 241 aa11.74□□□□□ -0.53
HMGN1-210ENST00000464078 TRBV19A0A075B6N1 114 aa11.73□□□□□ -0.53
HMGN1-210ENST00000464078 TRAV9-2A0A087WT02 112 aa11.73□□□□□ -0.53
HMGN1-210ENST00000464078 NAP1L6A6NFF2 107 aa11.73□□□□□ -0.53
HMGN1-210ENST00000464078 M0R3E3 92 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms