RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SORL1Q92673 2214 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 TRBV7-1A0A0A6YYK4 115 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 A0A0D9SG52 128 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 A0A1B0GV50 99 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 KANTRA0A1W2PQU2 76 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 IZUMO1RA6ND01 250 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 KRTAP9-6A8MVA2 160 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 FNDC10F2Z333 226 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 CORTO00230 105 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 MRPS12O15235 138 aaKnown RBP2.66□□□□□ -1.98
SCFD1-204ENST00000463622 IL4P05112 153 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 SPP1P10451 314 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 GP9P14770 177 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 ORM2P19652 201 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 ATP5IP56385 69 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-204ENST00000463622 DEFB1P60022 68 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 B2MP61769 119 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 HBG1P69891 147 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 HBG2P69892 147 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 RPP30P78346 268 aaKnown RBP2.66□□□□□ -1.98
SCFD1-204ENST00000463622 CCL20P78556 96 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 ZNF616Q08AN1 781 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 KLF5Q13887 457 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-204ENST00000463622 HAGHQ16775 308 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 FFAR4Q5NUL3 377 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 GPHB5Q86YW7 130 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 BAP18Q8IXM2 172 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 RPP25LQ8N5L8 163 aaKnown RBP2.66□□□□□ -1.98
SCFD1-204ENST00000463622 OR1L6Q8NGR2 347 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 OR1B1Q8NGR6 318 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 OR1N2Q8NGR9 330 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 TMEM190Q8WZ59 177 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 USMG5Q96IX5 58 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 FAM167A-AS1Q96KT0 104 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 CXorf58Q96LI9 332 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 FAM110AQ9BQ89 295 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 C20orf24Q9BUV8 137 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 PBDC1Q9BVG4 233 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 GGACTQ9BVM4 153 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 PARD6GQ9BYG4 376 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-204ENST00000463622 SLC25A22Q9H936 323 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 SLC39A9Q9NUM3 307 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 MRPL27Q9P0M9 148 aaKnown RBP2.66□□□□□ -1.98
SCFD1-204ENST00000463622 CACFD1Q9UGQ2 172 aa2.66□□□□□ -1.98
SCFD1-204ENST00000463622 ALMS1Q8TCU4 4167 aa2.65□□□□□ -1.98
SCFD1-204ENST00000463622 GAGE10A6NGK3 116 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 LINC01619G3V211 115 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 H3BRN7 92 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 SLC17A3O00476 420 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 NUPL2O15504 423 aaKnown RBP2.65□□□□□ -1.99
SCFD1-204ENST00000463622 GGCTO75223 188 aaKnown RBP2.65□□□□□ -1.99
SCFD1-204ENST00000463622 DFFBO76075 338 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 IFNA5P01569 189 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 CSN3P07498 182 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 RD3LP0DJH9 198 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 PYYP10082 97 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 HLA-DMBP28068 263 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 NUP62P37198 522 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-204ENST00000463622 RPL29P47914 159 aaKnown RBP2.65□□□□□ -1.99
SCFD1-204ENST00000463622 NPBWR1P48145 328 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 FGF8P55075 233 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-204ENST00000463622 PLP1P60201 277 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 YPEL3P61236 119 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-204ENST00000463622 ATP6V1FQ16864 119 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 RPEL1Q2QD12 228 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 LINC00322Q6ZN03 302 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-204ENST00000463622 ZNF600Q6ZNG1 722 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 PQLC2Q6ZP29 291 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 SLC51BQ86UW2 128 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 FAM24BQ8N5W8 94 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 OR2G3Q8NGZ4 309 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 RNF125Q96EQ8 232 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 TXN2Q99757 166 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 SLC25A2Q9BXI2 301 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 GON7Q9BXV9 100 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 THYN1Q9P016 225 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 MLXQ9UH92 298 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 KMT2AQ03164 3969 aa2.65□□□□□ -1.99
SCFD1-204ENST00000463622 IGKV3-7A0A075B6H7 116 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 A0A0G2JLM5 398 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 ZNF320A2RRD8 509 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 C2orf70A6NJV1 201 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 H3BQ15 152 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 NDUFA4O00483 81 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 TAAR5O14804 337 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 NMBP08949 121 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 OR5G3P0C626 314 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 TPT1P13693 172 aaKnown RBP2.64□□□□□ -1.99
SCFD1-204ENST00000463622 CRYBB3P26998 211 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 ZNF266Q14584 549 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 ZNF876PQ49A33 203 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 LCE3CQ5T5A8 94 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 ETFRF1Q6IPR1 90 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 TEX261Q6UWH6 196 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 LCN15Q6UWW0 184 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 ZNF680Q8NEM1 530 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 FAM213BQ8TBF2 198 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 SCGB1C1Q8TD33 95 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 RNF2Q99496 336 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 PSMG3Q9BT73 122 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms