RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 MARVELD1Q9BSK0 173 aa7.25□□□□□ -1.25
SF3A3-204ENST00000462258 NDUFAF3Q9BU61 184 aa7.25□□□□□ -1.25
SF3A3-204ENST00000462258 HECTD4Q9Y4D8 3996 aa7.25□□□□□ -1.25
SF3A3-204ENST00000462258 ZNF705GA8MUZ8 300 aaPredicted RBP7.24□□□□□ -1.25
SF3A3-204ENST00000462258 PRAC2D3DTV9 90 aa7.24□□□□□ -1.25
SF3A3-204ENST00000462258 H0YIZ8 118 aa7.24□□□□□ -1.25
SF3A3-204ENST00000462258 SSNA1O43805 119 aa7.24□□□□□ -1.25
SF3A3-204ENST00000462258 ZNF253O75346 499 aa7.24□□□□□ -1.25
SF3A3-204ENST00000462258 HTN3P15516 51 aa7.24□□□□□ -1.25
SF3A3-204ENST00000462258 H2BFSP57053 126 aa7.24□□□□□ -1.25
SF3A3-204ENST00000462258 DAD1P61803 113 aa7.24□□□□□ -1.25
SF3A3-204ENST00000462258 CYCSP99999 105 aaKnown RBP7.24□□□□□ -1.25
SF3A3-204ENST00000462258 NHLH2Q02577 135 aa7.24□□□□□ -1.25
SF3A3-204ENST00000462258 OXA1LQ15070 435 aa7.24□□□□□ -1.25
SF3A3-204ENST00000462258 GCSAMLQ5JQS6 135 aa7.24□□□□□ -1.25
SF3A3-204ENST00000462258 TMEM256Q8N2U0 113 aa7.24□□□□□ -1.25
SF3A3-204ENST00000462258 OR10J6PQ8NGY7 276 aa7.24□□□□□ -1.25
SF3A3-204ENST00000462258 PPP1R1CQ8WVI7 109 aa7.24□□□□□ -1.25
SF3A3-204ENST00000462258 SAT2Q96F10 170 aaPredicted RBP7.24□□□□□ -1.25
SF3A3-204ENST00000462258 BATF3Q9NR55 127 aa7.24□□□□□ -1.25
SF3A3-204ENST00000462258 KCNIP2Q9NS61 270 aa7.24□□□□□ -1.25
SF3A3-204ENST00000462258 FAT2Q9NYQ8 4349 aa7.23□□□□□ -1.25
SF3A3-204ENST00000462258 TRBV19A0A075B6N1 114 aa7.23□□□□□ -1.25
SF3A3-204ENST00000462258 LYRM9A8MSI8 78 aa7.23□□□□□ -1.25
SF3A3-204ENST00000462258 PRM2P04554 102 aa7.23□□□□□ -1.25
SF3A3-204ENST00000462258 PET100P0DJ07 73 aa7.23□□□□□ -1.25
SF3A3-204ENST00000462258 TSPOP30536 169 aa7.23□□□□□ -1.25
SF3A3-204ENST00000462258 FAM210BQ96KR6 192 aa7.23□□□□□ -1.25
SF3A3-204ENST00000462258 LINC01587Q99440 93 aa7.23□□□□□ -1.25
SF3A3-204ENST00000462258 PARD6GQ9BYG4 376 aaPredicted RBP7.23□□□□□ -1.25
SF3A3-204ENST00000462258 ZNF586Q9NXT0 402 aa7.23□□□□□ -1.25
SF3A3-204ENST00000462258 TMEM14CQ9P0S9 112 aa7.23□□□□□ -1.25
SF3A3-204ENST00000462258 PLAC8L1A1L4L8 177 aa7.22□□□□□ -1.25
SF3A3-204ENST00000462258 NPIPB6E9PJ23 425 aa7.22□□□□□ -1.25
SF3A3-204ENST00000462258 P0DMU3 169 aa7.22□□□□□ -1.25
SF3A3-204ENST00000462258 FAM231AP0DMU4 169 aa7.22□□□□□ -1.25
SF3A3-204ENST00000462258 FAM231CP0DMU5 169 aa7.22□□□□□ -1.25
SF3A3-204ENST00000462258 PYYP10082 97 aa7.22□□□□□ -1.25
SF3A3-204ENST00000462258 TAS2R60P59551 318 aa7.22□□□□□ -1.25
SF3A3-204ENST00000462258 PDE6HQ13956 83 aa7.22□□□□□ -1.25
SF3A3-204ENST00000462258 GFI1BQ5VTD9 330 aa7.22□□□□□ -1.25
SF3A3-204ENST00000462258 MRPL53Q96EL3 112 aaKnown RBP7.22□□□□□ -1.25
SF3A3-204ENST00000462258 C16orf74Q96GX8 76 aa7.22□□□□□ -1.25
SF3A3-204ENST00000462258 ODF3Q96PU9 254 aa7.22□□□□□ -1.25
SF3A3-204ENST00000462258 ATP5SQ99766 215 aa7.22□□□□□ -1.25
SF3A3-204ENST00000462258 C20orf144Q9BQM9 153 aa7.22□□□□□ -1.25
SF3A3-204ENST00000462258 SLC25A2Q9BXI2 301 aa7.22□□□□□ -1.25
SF3A3-204ENST00000462258 WDR61Q9GZS3 305 aaKnown RBP7.22□□□□□ -1.25
SF3A3-204ENST00000462258 DNAH17Q9UFH2 4485 aa7.21□□□□□ -1.26
SF3A3-204ENST00000462258 C17orf112F2Z3M2 114 aa7.21□□□□□ -1.26
SF3A3-204ENST00000462258 H7BYZ3 331 aa7.21□□□□□ -1.26
SF3A3-204ENST00000462258 M0R3E3 92 aa7.21□□□□□ -1.26
SF3A3-204ENST00000462258 MPC2O95563 127 aa7.21□□□□□ -1.26
SF3A3-204ENST00000462258 HIST1H1EP10412 219 aaKnown RBP7.21□□□□□ -1.26
SF3A3-204ENST00000462258 HTN1P15515 57 aa7.21□□□□□ -1.26
SF3A3-204ENST00000462258 AZU1P20160 251 aa7.21□□□□□ -1.26
SF3A3-204ENST00000462258 LEPP41159 167 aa7.21□□□□□ -1.26
SF3A3-204ENST00000462258 KIR3DS1Q14943 382 aa7.21□□□□□ -1.26
SF3A3-204ENST00000462258 TMEM88Q6PEY1 159 aa7.21□□□□□ -1.26
SF3A3-204ENST00000462258 MIR17HGQ75NE6 70 aa7.21□□□□□ -1.26
SF3A3-204ENST00000462258 TMEM263Q8WUH6 116 aaKnown RBP7.21□□□□□ -1.26
SF3A3-204ENST00000462258 BLNKQ8WV28 456 aa7.21□□□□□ -1.26
SF3A3-204ENST00000462258 MRPL32Q9BYC8 188 aaKnown RBP7.21□□□□□ -1.26
SF3A3-204ENST00000462258 MBD2Q9UBB5 411 aa7.21□□□□□ -1.26
SF3A3-204ENST00000462258 HSPB11Q9Y547 144 aa7.21□□□□□ -1.26
SF3A3-204ENST00000462258 TIMM9Q9Y5J7 89 aa7.21□□□□□ -1.26
SF3A3-204ENST00000462258 J3KRW8 73 aa7.2□□□□□ -1.26
SF3A3-204ENST00000462258 NDUFB4O95168 129 aa7.2□□□□□ -1.26
SF3A3-204ENST00000462258 DEFB130BP0DP73 79 aa7.2□□□□□ -1.26
SF3A3-204ENST00000462258 DEFB130AP0DP74 79 aa7.2□□□□□ -1.26
SF3A3-204ENST00000462258 UBE2DNLQ8IWF7 75 aa7.2□□□□□ -1.26
SF3A3-204ENST00000462258 POM121L12Q8N7R1 296 aa7.2□□□□□ -1.26
SF3A3-204ENST00000462258 RNASE8Q8TDE3 154 aaKnown RBP7.2□□□□□ -1.26
SF3A3-204ENST00000462258 FAM167A-AS1Q96KT0 104 aa7.2□□□□□ -1.26
SF3A3-204ENST00000462258 AAMDCQ9H7C9 122 aa7.2□□□□□ -1.26
SF3A3-204ENST00000462258 PRELID1Q9Y255 219 aa7.2□□□□□ -1.26
SF3A3-204ENST00000462258 PTTG1O95997 202 aa7.19□□□□□ -1.26
SF3A3-204ENST00000462258 CT45A10P0DMU9 189 aa7.19□□□□□ -1.26
SF3A3-204ENST00000462258 RPL12P30050 165 aaKnown RBP7.19□□□□□ -1.26
SF3A3-204ENST00000462258 ZNF493Q6ZR52 646 aa7.19□□□□□ -1.26
SF3A3-204ENST00000462258 EXOC3-AS1Q8N2X6 119 aa7.19□□□□□ -1.26
SF3A3-204ENST00000462258 SMIM3Q9BZL3 60 aa7.19□□□□□ -1.26
SF3A3-204ENST00000462258 FUT9Q9Y231 359 aa7.19□□□□□ -1.26
SF3A3-204ENST00000462258 ALG5Q9Y673 324 aa7.19□□□□□ -1.26
SF3A3-204ENST00000462258 NACAE9PAV3 2078 aa7.19□□□□□ -1.26
SF3A3-204ENST00000462258 IGKV2-40A0A087WW87 121 aaPredicted RBP7.18□□□□□ -1.26
SF3A3-204ENST00000462258 TRAV12-3A0A0B4J271 114 aa7.18□□□□□ -1.26
SF3A3-204ENST00000462258 OR7C2O60412 319 aa7.18□□□□□ -1.26
SF3A3-204ENST00000462258 IFNA5P01569 189 aa7.18□□□□□ -1.26
SF3A3-204ENST00000462258 IGKV2D-40P01614 121 aaPredicted RBP7.18□□□□□ -1.26
SF3A3-204ENST00000462258 ATP5G1P05496 136 aa7.18□□□□□ -1.26
SF3A3-204ENST00000462258 OR10J4P0C629 311 aa7.18□□□□□ -1.26
SF3A3-204ENST00000462258 ATP5G3P48201 142 aa7.18□□□□□ -1.26
SF3A3-204ENST00000462258 ERCC8Q13216 396 aa7.18□□□□□ -1.26
SF3A3-204ENST00000462258 ICAM4Q14773 271 aa7.18□□□□□ -1.26
SF3A3-204ENST00000462258 FCN2Q15485 313 aa7.18□□□□□ -1.26
SF3A3-204ENST00000462258 FFAR4Q5NUL3 377 aa7.18□□□□□ -1.26
SF3A3-204ENST00000462258 FAM122CQ6P4D5 195 aa7.18□□□□□ -1.26
SF3A3-204ENST00000462258 C15orf53Q8NAA6 179 aa7.18□□□□□ -1.26
SF3A3-204ENST00000462258 FXYD5Q96DB9 178 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms