RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 MOB3BQ86TA1 216 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 BOD1L2Q8IYS8 172 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 DYNAPQ8N1N2 210 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 CYB561D1Q8N8Q1 229 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 OR4C13Q8NGP0 309 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 FAM213BQ8TBF2 198 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 IL22RA2Q969J5 263 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 RCHY1Q96PM5 261 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 PRR25Q96S07 402 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 RARRES2Q99969 163 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 HSPB9Q9BQS6 159 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 SAMD10Q9BYL1 202 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 PARP12Q9H0J9 701 aaKnown RBP4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 IFI27L2Q9H2X8 130 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 ST20Q9HBF5 79 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 EHFQ9NZC4 300 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 HSPB8Q9UJY1 196 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 OR2W1Q9Y3N9 320 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 LSM4Q9Y4Z0 139 aaKnown RBP4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 TRAV9-2A0A087WT02 112 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 IGHV1-3A0A0C4DH29 117 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 A0A1W2PPI3 338 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 F8WDY8 70 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 ST8SIA3O43173 380 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 SAP30O75446 220 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 BRI3O95415 125 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 FAM106CPP0CH98 169 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 CD24P25063 80 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 DYNLT3P51808 116 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 ZNF137PP52743 207 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 TCTAP57738 103 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 YPEL3P61236 119 aaPredicted RBP4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 HERV-K104P61576 105 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 RHOBP62745 196 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 PSG9Q00887 426 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 ZNF816Q0VGE8 651 aaPredicted RBP4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 HES1Q14469 280 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 MLANAQ16655 118 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 RPL39P5Q59GN2 51 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 ZNF833PQ6ZTB9 187 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 ODF3L1Q8IXM7 274 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 DRAM1Q8N682 238 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 RTN4IP1Q8WWV3 396 aaPredicted RBP4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 DDB2Q92466 427 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 ST6GALNAC6Q969X2 333 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 S1PR3Q99500 378 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 QTRT1Q9BXR0 403 aaKnown RBP4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 GTSF1LQ9H1H1 148 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 OR2D2Q9H210 308 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 SH3BGRL3Q9H299 93 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 NAA60Q9H7X0 242 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 TCF19Q9Y242 345 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 PXMP4Q9Y6I8 212 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 STARD9Q9P2P6 4700 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 MUC4Q99102 2169 aa4.68□□□□□ -1.66
SMARCC1-204ENST00000462198 HECTD4Q9Y4D8 3996 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 IGHV3-72A0A0B4J1Y9 119 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 TMEM250H0YL14 139 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 HMGB3O15347 200 aaKnown RBP4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 CNIH1O95406 144 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 KRASP01116 189 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 PPYP01298 95 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 IGKV1D-33P01593 117 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 IGKV1-33P01594 117 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 MT-ND6P03923 174 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 LINC00869P0C866 280 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 MED14OSP0DP75 135 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 AADACP22760 399 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 NPY1RP25929 384 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 AMTP48728 403 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 FXYD4P59646 89 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 EWSR1Q01844 656 aaKnown RBP eCLIP4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 MEF2BQ02080 365 aaPredicted RBP4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 FFAR4Q5NUL3 377 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 CST9LP1Q5W188 147 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 TMEM219Q86XT9 240 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 PIFOQ8TCI5 191 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 MBD3L1Q8WWY6 194 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 TMEM37Q8WXS4 190 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 MRPL20Q9BYC9 149 aaKnown RBP4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 SMIM3Q9BZL3 60 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 NPFFR1Q9GZQ6 430 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 TMEM126AQ9H061 195 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 SERTAD4Q9NUC0 356 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 CYSLTR1Q9Y271 337 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 RCL1Q9Y2P8 373 aaKnown RBP4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 UFC1Q9Y3C8 167 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 TRAPPC1Q9Y5R8 145 aa4.67□□□□□ -1.66
SMARCC1-204ENST00000462198 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 IGKV1D-13A0A0B4J2D9 117 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 A6NDX4 124 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 H3BRM9 83 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 SIVA1O15304 175 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 SNAI2O43623 268 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 KBTBD11O94819 623 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 APOA2P02652 100 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 CT45A6P0DMU7 189 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms