RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	RNF222	A6NCQ9	220 aa		9.22	□□□□□ -0.93
FDPS-204	ENST00000461507		M0R2Z0	102 aa		9.22	□□□□□ -0.93
FDPS-204	ENST00000461507	GIG44	P09565	113 aa	Predicted RBP	9.22	□□□□□ -0.93
FDPS-204	ENST00000461507	HIST1H1E	P10412	219 aa	Known RBP	9.22	□□□□□ -0.93
FDPS-204	ENST00000461507	RPL7L1	Q6DKI1	246 aa	Known RBP	9.22	□□□□□ -0.93
FDPS-204	ENST00000461507	OR10G4	Q8NGN3	311 aa		9.22	□□□□□ -0.93
FDPS-204	ENST00000461507	OR10G9	Q8NGN4	311 aa		9.22	□□□□□ -0.93
FDPS-204	ENST00000461507	OR10G7	Q8NGN6	311 aa		9.22	□□□□□ -0.93
FDPS-204	ENST00000461507	TMEM14C	Q9P0S9	112 aa		9.22	□□□□□ -0.93
FDPS-204	ENST00000461507	GOLT1B	Q9Y3E0	138 aa		9.22	□□□□□ -0.93
FDPS-204	ENST00000461507	DNAH6	Q9C0G6	4158 aa		9.22	□□□□□ -0.93
FDPS-204	ENST00000461507	DNAH10	Q8IVF4	4471 aa		9.21	□□□□□ -0.93
FDPS-204	ENST00000461507	IGHV4-28	A0A0C4DH34	117 aa		9.21	□□□□□ -0.94
FDPS-204	ENST00000461507	BOLA2-SMG1P6	H3BVE0	249 aa		9.21	□□□□□ -0.94
FDPS-204	ENST00000461507		J3KRW8	73 aa		9.21	□□□□□ -0.94
FDPS-204	ENST00000461507	HMGB3	O15347	200 aa	Known RBP	9.21	□□□□□ -0.94
FDPS-204	ENST00000461507	INS	P01308	110 aa		9.21	□□□□□ -0.94
FDPS-204	ENST00000461507	M6PR	P20645	277 aa		9.21	□□□□□ -0.94
FDPS-204	ENST00000461507	ATP6V0C	P27449	155 aa		9.21	□□□□□ -0.94
FDPS-204	ENST00000461507	IQCF2	Q8IXL9	164 aa		9.21	□□□□□ -0.94
FDPS-204	ENST00000461507	BAP18	Q8IXM2	172 aa		9.21	□□□□□ -0.94
FDPS-204	ENST00000461507	EXOC3-AS1	Q8N2X6	119 aa		9.21	□□□□□ -0.94
FDPS-204	ENST00000461507	PHLDA1	Q8WV24	401 aa	Predicted RBP	9.21	□□□□□ -0.94
FDPS-204	ENST00000461507	RNF141	Q8WVD5	230 aa		9.21	□□□□□ -0.94
FDPS-204	ENST00000461507	VPS13D	Q5THJ4	4388 aa		9.21	□□□□□ -0.94
FDPS-204	ENST00000461507	TRAV12-2	A0A075B6T6	113 aa		9.2	□□□□□ -0.94
FDPS-204	ENST00000461507	PRAC2	D3DTV9	90 aa		9.2	□□□□□ -0.94
FDPS-204	ENST00000461507	LY6G6C	O95867	125 aa		9.2	□□□□□ -0.94
FDPS-204	ENST00000461507	NBEAP1	P0C6P0	100 aa		9.2	□□□□□ -0.94
FDPS-204	ENST00000461507	MIF	P14174	115 aa		9.2	□□□□□ -0.94
FDPS-204	ENST00000461507	CDC34	P49427	236 aa	Predicted RBP	9.2	□□□□□ -0.94
FDPS-204	ENST00000461507	EMP1	P54849	157 aa		9.2	□□□□□ -0.94
FDPS-204	ENST00000461507	ICAM4	Q14773	271 aa		9.2	□□□□□ -0.94
FDPS-204	ENST00000461507	FAM167A-AS1	Q96KT0	104 aa		9.2	□□□□□ -0.94
FDPS-204	ENST00000461507	SH3BGRL3	Q9H299	93 aa		9.2	□□□□□ -0.94
FDPS-204	ENST00000461507	RPH3AL	Q9UNE2	315 aa		9.2	□□□□□ -0.94
FDPS-204	ENST00000461507	FRAS1	Q86XX4	4008 aa		9.19	□□□□□ -0.94
FDPS-204	ENST00000461507		M0R3E3	92 aa		9.19	□□□□□ -0.94
FDPS-204	ENST00000461507	AMBP	P02760	352 aa		9.19	□□□□□ -0.94
FDPS-204	ENST00000461507	PDE6H	Q13956	83 aa		9.19	□□□□□ -0.94
FDPS-204	ENST00000461507		Q8NAQ8	132 aa		9.19	□□□□□ -0.94
FDPS-204	ENST00000461507	OR2G3	Q8NGZ4	309 aa		9.19	□□□□□ -0.94
FDPS-204	ENST00000461507	C11orf45	Q8TAV5	145 aa		9.19	□□□□□ -0.94
FDPS-204	ENST00000461507	GNPNAT1	Q96EK6	184 aa	Predicted RBP	9.19	□□□□□ -0.94
FDPS-204	ENST00000461507	SAT2	Q96F10	170 aa	Predicted RBP	9.19	□□□□□ -0.94
FDPS-204	ENST00000461507	PHYHIPL	Q96FC7	376 aa		9.19	□□□□□ -0.94
FDPS-204	ENST00000461507	PSMG3	Q9BT73	122 aa	Predicted RBP	9.19	□□□□□ -0.94
FDPS-204	ENST00000461507		X6R8D5	127 aa		9.19	□□□□□ -0.94
FDPS-204	ENST00000461507	ZNF705E	A8MWA4	302 aa	Predicted RBP	9.18	□□□□□ -0.94
FDPS-204	ENST00000461507		G3V3Q6	166 aa		9.18	□□□□□ -0.94
FDPS-204	ENST00000461507	ZNF253	O75346	499 aa		9.18	□□□□□ -0.94
FDPS-204	ENST00000461507	HBE1	P02100	147 aa		9.18	□□□□□ -0.94
FDPS-204	ENST00000461507	MB	P02144	154 aa		9.18	□□□□□ -0.94
FDPS-204	ENST00000461507	HTN1	P15515	57 aa		9.18	□□□□□ -0.94
FDPS-204	ENST00000461507	CSN1S1	P47710	185 aa		9.18	□□□□□ -0.94
FDPS-204	ENST00000461507	NANOS2	P60321	138 aa	Known RBP	9.18	□□□□□ -0.94
FDPS-204	ENST00000461507	RAN	P62826	216 aa	Known RBP	9.18	□□□□□ -0.94
FDPS-204	ENST00000461507	LGALS9C	Q6DKI2	356 aa		9.18	□□□□□ -0.94
FDPS-204	ENST00000461507	CSNK1G2-AS1	Q8NCQ2	148 aa		9.18	□□□□□ -0.94
FDPS-204	ENST00000461507	FXYD5	Q96DB9	178 aa		9.18	□□□□□ -0.94
FDPS-204	ENST00000461507	HYLS1	Q96M11	299 aa		9.18	□□□□□ -0.94
FDPS-204	ENST00000461507	IGF2BP2-AS1	Q96M15	143 aa		9.18	□□□□□ -0.94
FDPS-204	ENST00000461507	CLUHP3	Q96NS8	147 aa		9.18	□□□□□ -0.94
FDPS-204	ENST00000461507	PRELID1	Q9Y255	219 aa		9.18	□□□□□ -0.94
FDPS-204	ENST00000461507	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	9.17	□□□□□ -0.94
FDPS-204	ENST00000461507	TAAR5	O14804	337 aa		9.17	□□□□□ -0.94
FDPS-204	ENST00000461507	PFDN1	O60925	122 aa		9.17	□□□□□ -0.94
FDPS-204	ENST00000461507	NDUFB4	O95168	129 aa		9.17	□□□□□ -0.94
FDPS-204	ENST00000461507	IGKV2D-40	P01614	121 aa	Predicted RBP	9.17	□□□□□ -0.94
FDPS-204	ENST00000461507	TSPO	P30536	169 aa		9.17	□□□□□ -0.94
FDPS-204	ENST00000461507	TCTA	P57738	103 aa		9.17	□□□□□ -0.94
FDPS-204	ENST00000461507	ERCC8	Q13216	396 aa		9.17	□□□□□ -0.94
FDPS-204	ENST00000461507	AKR1C8P	Q5T2L2	129 aa		9.17	□□□□□ -0.94
FDPS-204	ENST00000461507	AMTN	Q6UX39	209 aa		9.17	□□□□□ -0.94
FDPS-204	ENST00000461507	RPP25L	Q8N5L8	163 aa	Known RBP	9.17	□□□□□ -0.94
FDPS-204	ENST00000461507	ARPC5L	Q9BPX5	153 aa		9.17	□□□□□ -0.94
FDPS-204	ENST00000461507		Q9H3A6	140 aa		9.17	□□□□□ -0.94
FDPS-204	ENST00000461507	KANTR	A0A1W2PQU2	76 aa		9.16	□□□□□ -0.94
FDPS-204	ENST00000461507	RBMY1A1	P0DJD3	496 aa	Known RBP	9.16	□□□□□ -0.94
FDPS-204	ENST00000461507	RBMY1C	P0DJD4	496 aa		9.16	□□□□□ -0.94
FDPS-204	ENST00000461507	ARL14EPL	P0DKL9	152 aa		9.16	□□□□□ -0.94
FDPS-204	ENST00000461507	LEP	P41159	167 aa		9.16	□□□□□ -0.94
FDPS-204	ENST00000461507	CDKN1B	P46527	198 aa		9.16	□□□□□ -0.94
FDPS-204	ENST00000461507	SERF2	P84101	59 aa		9.16	□□□□□ -0.94
FDPS-204	ENST00000461507	RBMY1F	Q15415	496 aa	Known RBP	9.16	□□□□□ -0.94
FDPS-204	ENST00000461507	RRN3P1	Q2M238	152 aa		9.16	□□□□□ -0.94
FDPS-204	ENST00000461507	FAM74A1	Q5RGS3	127 aa		9.16	□□□□□ -0.94
FDPS-204	ENST00000461507	PQLC2	Q6ZP29	291 aa		9.16	□□□□□ -0.94
FDPS-204	ENST00000461507	CMTM2	Q8TAZ6	248 aa		9.16	□□□□□ -0.94
FDPS-204	ENST00000461507	MRPL53	Q96EL3	112 aa	Known RBP	9.16	□□□□□ -0.94
FDPS-204	ENST00000461507	LINC01587	Q99440	93 aa		9.16	□□□□□ -0.94
FDPS-204	ENST00000461507	ZNF471	Q9BX82	626 aa	Predicted RBP	9.16	□□□□□ -0.94
FDPS-204	ENST00000461507	ACTR3C	Q9C0K3	210 aa	Predicted RBP	9.16	□□□□□ -0.94
FDPS-204	ENST00000461507	LOC102723971	A0A1B0GUV8	181 aa		9.15	□□□□□ -0.94
FDPS-204	ENST00000461507	ZNF705G	A8MUZ8	300 aa	Predicted RBP	9.15	□□□□□ -0.94
FDPS-204	ENST00000461507	TMEM78	Q5T7P6	136 aa		9.15	□□□□□ -0.94
FDPS-204	ENST00000461507	ZNF705A	Q6ZN79	300 aa	Predicted RBP	9.15	□□□□□ -0.94
FDPS-204	ENST00000461507	ZNF767P	Q75MW2	155 aa		9.15	□□□□□ -0.94
FDPS-204	ENST00000461507	C1orf158	Q8N1D5	194 aa		9.15	□□□□□ -0.94
FDPS-204	ENST00000461507	RAB24	Q969Q5	203 aa		9.15	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms