RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 K7EIL1 84 aa7.54□□□□□ -1.2
UPF2-204ENST00000460569 SLC25A5P05141 298 aaKnown RBP7.54□□□□□ -1.2
UPF2-204ENST00000460569 IGHV4-30-4P0DP06 118 aa7.54□□□□□ -1.2
UPF2-204ENST00000460569 PPT1P50897 306 aa7.54□□□□□ -1.2
UPF2-204ENST00000460569 CCL20P78556 96 aa7.54□□□□□ -1.2
UPF2-204ENST00000460569 GDF5OSQ5U4N7 250 aa7.54□□□□□ -1.2
UPF2-204ENST00000460569 CST9LP1Q5W188 147 aa7.54□□□□□ -1.2
UPF2-204ENST00000460569 EBLN2Q6P2I7 272 aa7.54□□□□□ -1.2
UPF2-204ENST00000460569 FOXI2Q6ZQN5 318 aa7.54□□□□□ -1.2
UPF2-204ENST00000460569 CMTM2Q8TAZ6 248 aa7.54□□□□□ -1.2
UPF2-204ENST00000460569 PCNPQ8WW12 178 aaKnown RBP7.54□□□□□ -1.2
UPF2-204ENST00000460569 MRPL53Q96EL3 112 aaKnown RBP7.54□□□□□ -1.2
UPF2-204ENST00000460569 CITED4Q96RK1 184 aa7.54□□□□□ -1.2
UPF2-204ENST00000460569 TUBA4BQ9H853 241 aa7.54□□□□□ -1.2
UPF2-204ENST00000460569 MANBALQ9NQG1 85 aa7.54□□□□□ -1.2
UPF2-204ENST00000460569 GNG13Q9P2W3 67 aa7.54□□□□□ -1.2
UPF2-204ENST00000460569 AGRNO00468 2067 aa7.53□□□□□ -1.2
UPF2-204ENST00000460569 A0A1W2PRE2 83 aa7.53□□□□□ -1.2
UPF2-204ENST00000460569 FAM74A7A6NL05 159 aa7.53□□□□□ -1.2
UPF2-204ENST00000460569 PRAC2D3DTV9 90 aa7.53□□□□□ -1.2
UPF2-204ENST00000460569 PAGE4O60829 102 aa7.53□□□□□ -1.2
UPF2-204ENST00000460569 IFNA1P01562 189 aa7.53□□□□□ -1.2
UPF2-204ENST00000460569 ZNF705DP0CH99 300 aaPredicted RBP7.53□□□□□ -1.2
UPF2-204ENST00000460569 ZNF705BP0CI00 300 aaPredicted RBP7.53□□□□□ -1.2
UPF2-204ENST00000460569 HLA-DRB4P13762 266 aa7.53□□□□□ -1.2
UPF2-204ENST00000460569 CSN1S1P47710 185 aa7.53□□□□□ -1.2
UPF2-204ENST00000460569 SUMO1P63165 101 aaKnown RBP7.53□□□□□ -1.2
UPF2-204ENST00000460569 IFITM2Q01629 132 aa7.53□□□□□ -1.2
UPF2-204ENST00000460569 HIST1H1AQ02539 215 aaPredicted RBP7.53□□□□□ -1.2
UPF2-204ENST00000460569 ZNF767PQ75MW2 155 aa7.53□□□□□ -1.2
UPF2-204ENST00000460569 STHQ8IWL8 128 aa7.53□□□□□ -1.2
UPF2-204ENST00000460569 OR4B1Q8NGF8 309 aa7.53□□□□□ -1.2
UPF2-204ENST00000460569 OR8A1Q8NGG7 326 aa7.53□□□□□ -1.2
UPF2-204ENST00000460569 SAV1Q9H4B6 383 aaPredicted RBP7.53□□□□□ -1.2
UPF2-204ENST00000460569 ARL2-SNX15V9GYD0 113 aa7.53□□□□□ -1.2
UPF2-204ENST00000460569 HLA-DRB4X5D2U9 266 aa7.53□□□□□ -1.2
UPF2-204ENST00000460569 IGKV2-40A0A087WW87 121 aaPredicted RBP7.52□□□□□ -1.21
UPF2-204ENST00000460569 A0A0J9YX75 114 aa7.52□□□□□ -1.21
UPF2-204ENST00000460569 DUSP14O95147 198 aaKnown RBP7.52□□□□□ -1.21
UPF2-204ENST00000460569 IGKV2D-40P01614 121 aaPredicted RBP7.52□□□□□ -1.21
UPF2-204ENST00000460569 IGKV3-20P01619 116 aa7.52□□□□□ -1.21
UPF2-204ENST00000460569 NMBP08949 121 aa7.52□□□□□ -1.21
UPF2-204ENST00000460569 RPL35AP18077 110 aaKnown RBP7.52□□□□□ -1.21
UPF2-204ENST00000460569 ATP5G3P48201 142 aa7.52□□□□□ -1.21
UPF2-204ENST00000460569 GNG5P63218 68 aa7.52□□□□□ -1.21
UPF2-204ENST00000460569 DEFA6Q01524 100 aa7.52□□□□□ -1.21
UPF2-204ENST00000460569 DEFB121Q5J5C9 76 aa7.52□□□□□ -1.21
UPF2-204ENST00000460569 C5orf17Q8NAS9 161 aa7.52□□□□□ -1.21
UPF2-204ENST00000460569 OR10J6PQ8NGY7 276 aa7.52□□□□□ -1.21
UPF2-204ENST00000460569 MRAPQ8TCY5 172 aa7.52□□□□□ -1.21
UPF2-204ENST00000460569 RXFP4Q8TDU9 374 aa7.52□□□□□ -1.21
UPF2-204ENST00000460569 NKX6-2Q9C056 277 aaPredicted RBP7.52□□□□□ -1.21
UPF2-204ENST00000460569 DIRC3C9JPN6 131 aa7.51□□□□□ -1.21
UPF2-204ENST00000460569 H3BMM0 161 aa7.51□□□□□ -1.21
UPF2-204ENST00000460569 BCL2P10415 239 aa7.51□□□□□ -1.21
UPF2-204ENST00000460569 CNN1P51911 297 aaKnown RBP7.51□□□□□ -1.21
UPF2-204ENST00000460569 RAB14P61106 215 aa7.51□□□□□ -1.21
UPF2-204ENST00000460569 HAGHQ16775 308 aa7.51□□□□□ -1.21
UPF2-204ENST00000460569 GOLT1AQ6ZVE7 132 aa7.51□□□□□ -1.21
UPF2-204ENST00000460569 TRPT1Q86TN4 253 aaKnown RBP7.51□□□□□ -1.21
UPF2-204ENST00000460569 LYPD6BQ8NI32 183 aa7.51□□□□□ -1.21
UPF2-204ENST00000460569 LOC102724200A0A096LPH7 203 aaPredicted RBP7.5□□□□□ -1.21
UPF2-204ENST00000460569 RBMY1BA6NDE4 496 aaKnown RBP7.5□□□□□ -1.21
UPF2-204ENST00000460569 RBMY1EA6NEQ0 496 aaKnown RBP7.5□□□□□ -1.21
UPF2-204ENST00000460569 A8MZ25 164 aa7.5□□□□□ -1.21
UPF2-204ENST00000460569 C11orf94C9JXX5 98 aa7.5□□□□□ -1.21
UPF2-204ENST00000460569 NPIPB6E9PJ23 425 aa7.5□□□□□ -1.21
UPF2-204ENST00000460569 RBMY1DP0C7P1 496 aaKnown RBP7.5□□□□□ -1.21
UPF2-204ENST00000460569 FRMD6-AS1P0C7T7 363 aa7.5□□□□□ -1.21
UPF2-204ENST00000460569 ERCC8Q13216 396 aa7.5□□□□□ -1.21
UPF2-204ENST00000460569 PPP1R14DQ9NXH3 145 aa7.5□□□□□ -1.21
UPF2-204ENST00000460569 EPDR1Q9UM22 224 aa7.5□□□□□ -1.21
UPF2-204ENST00000460569 LOC102723971A0A1B0GUV8 181 aa7.49□□□□□ -1.21
UPF2-204ENST00000460569 SERTM2A0A1B0GWG4 89 aa7.49□□□□□ -1.21
UPF2-204ENST00000460569 K7EQM0 130 aa7.49□□□□□ -1.21
UPF2-204ENST00000460569 PEX7O00628 323 aa7.49□□□□□ -1.21
UPF2-204ENST00000460569 TCRAP04437 139 aa7.49□□□□□ -1.21
UPF2-204ENST00000460569 TAGLN2P37802 199 aaKnown RBP7.49□□□□□ -1.21
UPF2-204ENST00000460569 MEF2BQ02080 365 aaPredicted RBP7.49□□□□□ -1.21
UPF2-204ENST00000460569 PMS2P11Q13670 270 aa7.49□□□□□ -1.21
UPF2-204ENST00000460569 TOR2AQ5JU69 321 aa7.49□□□□□ -1.21
UPF2-204ENST00000460569 TMEM78Q5T7P6 136 aa7.49□□□□□ -1.21
UPF2-204ENST00000460569 CCDC28AQ8IWP9 274 aa7.49□□□□□ -1.21
UPF2-204ENST00000460569 ARL6IP6Q8N6S5 226 aa7.49□□□□□ -1.21
UPF2-204ENST00000460569 CYB561D1Q8N8Q1 229 aa7.49□□□□□ -1.21
UPF2-204ENST00000460569 VGLL1Q99990 258 aa7.49□□□□□ -1.21
UPF2-204ENST00000460569 TCEAL7Q9BRU2 100 aa7.49□□□□□ -1.21
UPF2-204ENST00000460569 ATG101Q9BSB4 218 aa7.49□□□□□ -1.21
UPF2-204ENST00000460569 VAX2Q9UIW0 290 aa7.49□□□□□ -1.21
UPF2-204ENST00000460569 TRAV8-1A0A0A6YYK1 113 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 SCO2A0A1W2PP80 73 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 RBAKDNA6NC62 111 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 RBFOX3A6NFN3 312 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 A8MTW9 85 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 F6UZH7 168 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 AKR1C3P42330 323 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 APOC4P55056 127 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 FXYD7P58549 80 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 NUTF2P61970 127 aaKnown RBP7.48□□□□□ -1.21
UPF2-204ENST00000460569 CLLU1Q5K131 121 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms