RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 H2BFSP57053 126 aa13.43□□□□□ -0.26
COL5A1-203ENST00000460264 DAD1P61803 113 aa13.43□□□□□ -0.26
COL5A1-203ENST00000460264 OR5C1Q8NGR4 320 aa13.43□□□□□ -0.26
COL5A1-203ENST00000460264 SLC25A31Q9H0C2 315 aa13.43□□□□□ -0.26
COL5A1-203ENST00000460264 ZNF586Q9NXT0 402 aa13.43□□□□□ -0.26
COL5A1-203ENST00000460264 PLAC8L1A1L4L8 177 aa13.42□□□□□ -0.26
COL5A1-203ENST00000460264 LYRM9A8MSI8 78 aa13.42□□□□□ -0.26
COL5A1-203ENST00000460264 P0DMU3 169 aa13.42□□□□□ -0.26
COL5A1-203ENST00000460264 FAM231AP0DMU4 169 aa13.42□□□□□ -0.26
COL5A1-203ENST00000460264 FAM231CP0DMU5 169 aa13.42□□□□□ -0.26
COL5A1-203ENST00000460264 CYCSP99999 105 aaKnown RBP13.42□□□□□ -0.26
COL5A1-203ENST00000460264 OR10J6PQ8NGY7 276 aa13.42□□□□□ -0.26
COL5A1-203ENST00000460264 THAP6Q8TBB0 222 aa13.42□□□□□ -0.26
COL5A1-203ENST00000460264 ZNF253O75346 499 aa13.41□□□□□ -0.26
COL5A1-203ENST00000460264 AZU1P20160 251 aa13.41□□□□□ -0.26
COL5A1-203ENST00000460264 DEFA1P59665 94 aa13.41□□□□□ -0.26
COL5A1-203ENST00000460264 DEFA3P59666 94 aa13.41□□□□□ -0.26
COL5A1-203ENST00000460264 GCSAMLQ5JQS6 135 aa13.41□□□□□ -0.26
COL5A1-203ENST00000460264 LINC01587Q99440 93 aa13.41□□□□□ -0.26
COL5A1-203ENST00000460264 TMEM14CQ9P0S9 112 aa13.41□□□□□ -0.26
COL5A1-203ENST00000460264 DNAH10Q8IVF4 4471 aa13.41□□□□□ -0.26
COL5A1-203ENST00000460264 TRBV19A0A075B6N1 114 aa13.4□□□□□ -0.26
COL5A1-203ENST00000460264 TAS2R60P59551 318 aa13.4□□□□□ -0.26
COL5A1-203ENST00000460264 CLINT1Q14677 625 aa13.4□□□□□ -0.26
COL5A1-203ENST00000460264 KIR3DS1Q14943 382 aa13.4□□□□□ -0.26
COL5A1-203ENST00000460264 POM121L12Q8N7R1 296 aa13.4□□□□□ -0.26
COL5A1-203ENST00000460264 PARD6GQ9BYG4 376 aaPredicted RBP13.4□□□□□ -0.26
COL5A1-203ENST00000460264 PPP1R1CQ8WVI7 109 aa13.39□□□□□ -0.27
COL5A1-203ENST00000460264 NPIPB6E9PJ23 425 aa13.38□□□□□ -0.27
COL5A1-203ENST00000460264 SSNA1O43805 119 aa13.38□□□□□ -0.27
COL5A1-203ENST00000460264 NDUFB4O95168 129 aa13.38□□□□□ -0.27
COL5A1-203ENST00000460264 PYYP10082 97 aa13.38□□□□□ -0.27
COL5A1-203ENST00000460264 HTN1P15515 57 aa13.38□□□□□ -0.27
COL5A1-203ENST00000460264 GFI1BQ5VTD9 330 aa13.38□□□□□ -0.27
COL5A1-203ENST00000460264 TMEM88Q6PEY1 159 aa13.38□□□□□ -0.27
COL5A1-203ENST00000460264 MRPL53Q96EL3 112 aaKnown RBP13.38□□□□□ -0.27
COL5A1-203ENST00000460264 C16orf74Q96GX8 76 aa13.38□□□□□ -0.27
COL5A1-203ENST00000460264 ODF3Q96PU9 254 aa13.38□□□□□ -0.27
COL5A1-203ENST00000460264 C20orf144Q9BQM9 153 aa13.38□□□□□ -0.27
COL5A1-203ENST00000460264 BATF3Q9NR55 127 aa13.38□□□□□ -0.27
COL5A1-203ENST00000460264 H7BYZ3 331 aa13.37□□□□□ -0.27
COL5A1-203ENST00000460264 M0R3E3 92 aa13.37□□□□□ -0.27
COL5A1-203ENST00000460264 CT45A10P0DMU9 189 aa13.37□□□□□ -0.27
COL5A1-203ENST00000460264 DEFB130BP0DP73 79 aa13.37□□□□□ -0.27
COL5A1-203ENST00000460264 DEFB130AP0DP74 79 aa13.37□□□□□ -0.27
COL5A1-203ENST00000460264 HIST1H1EP10412 219 aaKnown RBP13.37□□□□□ -0.27
COL5A1-203ENST00000460264 PDE6HQ13956 83 aa13.37□□□□□ -0.27
COL5A1-203ENST00000460264 SLC25A2Q9BXI2 301 aa13.37□□□□□ -0.27
COL5A1-203ENST00000460264 WDR61Q9GZS3 305 aaKnown RBP13.37□□□□□ -0.27
COL5A1-203ENST00000460264 KCNIP2Q9NS61 270 aa13.37□□□□□ -0.27
COL5A1-203ENST00000460264 MPC2O95563 127 aa13.36□□□□□ -0.27
COL5A1-203ENST00000460264 FCN2Q15485 313 aa13.36□□□□□ -0.27
COL5A1-203ENST00000460264 ZNF493Q6ZR52 646 aa13.36□□□□□ -0.27
COL5A1-203ENST00000460264 MIR17HGQ75NE6 70 aa13.36□□□□□ -0.27
COL5A1-203ENST00000460264 RNASE8Q8TDE3 154 aaKnown RBP13.36□□□□□ -0.27
COL5A1-203ENST00000460264 TMEM263Q8WUH6 116 aaKnown RBP13.36□□□□□ -0.27
COL5A1-203ENST00000460264 FAM167A-AS1Q96KT0 104 aa13.36□□□□□ -0.27
COL5A1-203ENST00000460264 NACAE9PAV3 2078 aa13.35□□□□□ -0.27
COL5A1-203ENST00000460264 PET100P0DJ07 73 aa13.35□□□□□ -0.27
COL5A1-203ENST00000460264 LEPP41159 167 aa13.35□□□□□ -0.27
COL5A1-203ENST00000460264 BLNKQ8WV28 456 aa13.35□□□□□ -0.27
COL5A1-203ENST00000460264 ATP5SQ99766 215 aa13.35□□□□□ -0.27
COL5A1-203ENST00000460264 PRELID1Q9Y255 219 aa13.35□□□□□ -0.27
COL5A1-203ENST00000460264 TIMM9Q9Y5J7 89 aa13.35□□□□□ -0.27
COL5A1-203ENST00000460264 UBE2DNLQ8IWF7 75 aa13.34□□□□□ -0.27
COL5A1-203ENST00000460264 MRPL32Q9BYC8 188 aaKnown RBP13.34□□□□□ -0.27
COL5A1-203ENST00000460264 HSPB11Q9Y547 144 aa13.34□□□□□ -0.27
COL5A1-203ENST00000460264 TIMM8BQ9Y5J9 83 aaPredicted RBP13.34□□□□□ -0.27
COL5A1-203ENST00000460264 J3KRW8 73 aa13.33□□□□□ -0.28
COL5A1-203ENST00000460264 EXOC3-AS1Q8N2X6 119 aa13.33□□□□□ -0.28
COL5A1-203ENST00000460264 HECTD4Q9Y4D8 3996 aa13.33□□□□□ -0.28
COL5A1-203ENST00000460264 TRAV12-3A0A0B4J271 114 aa13.32□□□□□ -0.28
COL5A1-203ENST00000460264 C17orf112F2Z3M2 114 aa13.32□□□□□ -0.28
COL5A1-203ENST00000460264 ATP5G1P05496 136 aa13.32□□□□□ -0.28
COL5A1-203ENST00000460264 ATP5G3P48201 142 aa13.32□□□□□ -0.28
COL5A1-203ENST00000460264 ERCC8Q13216 396 aa13.32□□□□□ -0.28
COL5A1-203ENST00000460264 C15orf53Q8NAA6 179 aa13.32□□□□□ -0.28
COL5A1-203ENST00000460264 AAMDCQ9H7C9 122 aa13.32□□□□□ -0.28
COL5A1-203ENST00000460264 NOP10Q9NPE3 64 aaKnown RBP13.32□□□□□ -0.28
COL5A1-203ENST00000460264 MBD2Q9UBB5 411 aa13.32□□□□□ -0.28
COL5A1-203ENST00000460264 CBY3A6NI87 242 aa13.31□□□□□ -0.28
COL5A1-203ENST00000460264 F5H768 121 aa13.31□□□□□ -0.28
COL5A1-203ENST00000460264 NBEAP1P0C6P0 100 aa13.31□□□□□ -0.28
COL5A1-203ENST00000460264 RPL12P30050 165 aaKnown RBP13.31□□□□□ -0.28
COL5A1-203ENST00000460264 ICAM4Q14773 271 aa13.31□□□□□ -0.28
COL5A1-203ENST00000460264 RNF212Q495C1 297 aa13.31□□□□□ -0.28
COL5A1-203ENST00000460264 FXYD5Q96DB9 178 aa13.31□□□□□ -0.28
COL5A1-203ENST00000460264 OR51M1Q9H341 326 aa13.31□□□□□ -0.28
COL5A1-203ENST00000460264 FUT9Q9Y231 359 aa13.31□□□□□ -0.28
COL5A1-203ENST00000460264 SLC25A5P05141 298 aaKnown RBP13.3□□□□□ -0.28
COL5A1-203ENST00000460264 OR10J4P0C629 311 aa13.3□□□□□ -0.28
COL5A1-203ENST00000460264 CCDC28AQ8IWP9 274 aa13.3□□□□□ -0.28
COL5A1-203ENST00000460264 FAM19A4Q96LR4 140 aa13.3□□□□□ -0.28
COL5A1-203ENST00000460264 LINC00477Q96M19 166 aa13.3□□□□□ -0.28
COL5A1-203ENST00000460264 PYGO2Q9BRQ0 406 aa13.3□□□□□ -0.28
COL5A1-203ENST00000460264 PAXXQ9BUH6 204 aa13.3□□□□□ -0.28
COL5A1-203ENST00000460264 SMIM3Q9BZL3 60 aa13.3□□□□□ -0.28
COL5A1-203ENST00000460264 AGPAT4-IT1Q9H0P7 198 aa13.3□□□□□ -0.28
COL5A1-203ENST00000460264 IGKV2-40A0A087WW87 121 aaPredicted RBP13.29□□□□□ -0.28
COL5A1-203ENST00000460264 C7orf71A4D174 169 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms