RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	TMEM256	Q8N2U0	113 aa		11.3	□□□□□ -0.6
HDLBP-223	ENST00000449864	SAT2	Q96F10	170 aa	Predicted RBP	11.3	□□□□□ -0.6
HDLBP-223	ENST00000449864	ATP5S	Q99766	215 aa		11.3	□□□□□ -0.6
HDLBP-223	ENST00000449864	WDR61	Q9GZS3	305 aa	Known RBP	11.3	□□□□□ -0.6
HDLBP-223	ENST00000449864	ZNF586	Q9NXT0	402 aa		11.3	□□□□□ -0.6
HDLBP-223	ENST00000449864	TMEM14C	Q9P0S9	112 aa		11.3	□□□□□ -0.6
HDLBP-223	ENST00000449864	PRAC2	D3DTV9	90 aa		11.29	□□□□□ -0.6
HDLBP-223	ENST00000449864	ZNF253	O75346	499 aa		11.29	□□□□□ -0.6
HDLBP-223	ENST00000449864	PTTG1	O95997	202 aa		11.29	□□□□□ -0.6
HDLBP-223	ENST00000449864	PYY	P10082	97 aa		11.29	□□□□□ -0.6
HDLBP-223	ENST00000449864	HTN3	P15516	51 aa		11.29	□□□□□ -0.6
HDLBP-223	ENST00000449864	TSPO	P30536	169 aa		11.29	□□□□□ -0.6
HDLBP-223	ENST00000449864	RPP25L	Q8N5L8	163 aa	Known RBP	11.29	□□□□□ -0.6
HDLBP-223	ENST00000449864	LINC01587	Q99440	93 aa		11.29	□□□□□ -0.6
HDLBP-223	ENST00000449864	MBD2	Q9UBB5	411 aa		11.29	□□□□□ -0.6
HDLBP-223	ENST00000449864	HSPB11	Q9Y547	144 aa		11.29	□□□□□ -0.6
HDLBP-223	ENST00000449864	TIMM9	Q9Y5J7	89 aa		11.29	□□□□□ -0.6
HDLBP-223	ENST00000449864	ALG5	Q9Y673	324 aa		11.29	□□□□□ -0.6
HDLBP-223	ENST00000449864	TRBV19	A0A075B6N1	114 aa		11.28	□□□□□ -0.6
HDLBP-223	ENST00000449864	RPL12	P30050	165 aa	Known RBP	11.28	□□□□□ -0.6
HDLBP-223	ENST00000449864	DAD1	P61803	113 aa		11.28	□□□□□ -0.6
HDLBP-223	ENST00000449864	BLNK	Q8WV28	456 aa		11.28	□□□□□ -0.6
HDLBP-223	ENST00000449864	NDUFAF3	Q9BU61	184 aa		11.28	□□□□□ -0.6
HDLBP-223	ENST00000449864	SMIM3	Q9BZL3	60 aa		11.28	□□□□□ -0.6
HDLBP-223	ENST00000449864	IFNA5	P01569	189 aa		11.27	□□□□□ -0.61
HDLBP-223	ENST00000449864	HIST1H1E	P10412	219 aa	Known RBP	11.27	□□□□□ -0.61
HDLBP-223	ENST00000449864	HTN1	P15515	57 aa		11.27	□□□□□ -0.61
HDLBP-223	ENST00000449864	MIR17HG	Q75NE6	70 aa		11.27	□□□□□ -0.61
HDLBP-223	ENST00000449864	SCGB1C1	Q8TD33	95 aa		11.27	□□□□□ -0.61
HDLBP-223	ENST00000449864	MRPL53	Q96EL3	112 aa	Known RBP	11.27	□□□□□ -0.61
HDLBP-223	ENST00000449864	SLC25A2	Q9BXI2	301 aa		11.27	□□□□□ -0.61
HDLBP-223	ENST00000449864	MRPL32	Q9BYC8	188 aa	Known RBP	11.27	□□□□□ -0.61
HDLBP-223	ENST00000449864	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.27	□□□□□ -0.61
HDLBP-223	ENST00000449864	AAMDC	Q9H7C9	122 aa		11.27	□□□□□ -0.61
HDLBP-223	ENST00000449864	PRM2	P04554	102 aa		11.26	□□□□□ -0.61
HDLBP-223	ENST00000449864	LEP	P41159	167 aa		11.26	□□□□□ -0.61
HDLBP-223	ENST00000449864	PDE6H	Q13956	83 aa		11.26	□□□□□ -0.61
HDLBP-223	ENST00000449864	OXA1L	Q15070	435 aa		11.26	□□□□□ -0.61
HDLBP-223	ENST00000449864	PRELID1	Q9Y255	219 aa		11.26	□□□□□ -0.61
HDLBP-223	ENST00000449864	LYRM9	A8MSI8	78 aa		11.25	□□□□□ -0.61
HDLBP-223	ENST00000449864	NPIPB6	E9PJ23	425 aa		11.25	□□□□□ -0.61
HDLBP-223	ENST00000449864		J3KRW8	73 aa		11.25	□□□□□ -0.61
HDLBP-223	ENST00000449864		M0R3E3	92 aa		11.25	□□□□□ -0.61
HDLBP-223	ENST00000449864	TAS2R60	P59551	318 aa		11.25	□□□□□ -0.61
HDLBP-223	ENST00000449864	FFAR4	Q5NUL3	377 aa		11.25	□□□□□ -0.61
HDLBP-223	ENST00000449864	GFI1B	Q5VTD9	330 aa		11.25	□□□□□ -0.61
HDLBP-223	ENST00000449864	C16orf74	Q96GX8	76 aa		11.25	□□□□□ -0.61
HDLBP-223	ENST00000449864	C20orf144	Q9BQM9	153 aa		11.25	□□□□□ -0.61
HDLBP-223	ENST00000449864	PLA2G2E	Q9NZK7	142 aa		11.25	□□□□□ -0.61
HDLBP-223	ENST00000449864	FUT9	Q9Y231	359 aa		11.25	□□□□□ -0.61
HDLBP-223	ENST00000449864		H7BYZ3	331 aa		11.24	□□□□□ -0.61
HDLBP-223	ENST00000449864	OR7C2	O60412	319 aa		11.24	□□□□□ -0.61
HDLBP-223	ENST00000449864	NDUFB4	O95168	129 aa		11.24	□□□□□ -0.61
HDLBP-223	ENST00000449864	AZU1	P20160	251 aa		11.24	□□□□□ -0.61
HDLBP-223	ENST00000449864	EXOC3-AS1	Q8N2X6	119 aa		11.24	□□□□□ -0.61
HDLBP-223	ENST00000449864	FAM167A-AS1	Q96KT0	104 aa		11.24	□□□□□ -0.61
HDLBP-223	ENST00000449864	ODF3	Q96PU9	254 aa		11.24	□□□□□ -0.61
HDLBP-223	ENST00000449864	PAXX	Q9BUH6	204 aa		11.24	□□□□□ -0.61
HDLBP-223	ENST00000449864	MED28	Q9H204	178 aa		11.24	□□□□□ -0.61
HDLBP-223	ENST00000449864	OR51M1	Q9H341	326 aa		11.24	□□□□□ -0.61
HDLBP-223	ENST00000449864	OR10J4	P0C629	311 aa		11.23	□□□□□ -0.61
HDLBP-223	ENST00000449864	CT45A10	P0DMU9	189 aa		11.23	□□□□□ -0.61
HDLBP-223	ENST00000449864	DEFB130B	P0DP73	79 aa		11.23	□□□□□ -0.61
HDLBP-223	ENST00000449864	DEFB130A	P0DP74	79 aa		11.23	□□□□□ -0.61
HDLBP-223	ENST00000449864	ICAM4	Q14773	271 aa		11.23	□□□□□ -0.61
HDLBP-223	ENST00000449864	FAM122C	Q6P4D5	195 aa		11.23	□□□□□ -0.61
HDLBP-223	ENST00000449864	FAM210B	Q96KR6	192 aa		11.23	□□□□□ -0.61
HDLBP-223	ENST00000449864	NBEAP1	P0C6P0	100 aa		11.22	□□□□□ -0.61
HDLBP-223	ENST00000449864		P0DMU3	169 aa		11.22	□□□□□ -0.61
HDLBP-223	ENST00000449864	FAM231A	P0DMU4	169 aa		11.22	□□□□□ -0.61
HDLBP-223	ENST00000449864	FAM231C	P0DMU5	169 aa		11.22	□□□□□ -0.61
HDLBP-223	ENST00000449864	UBE2L3	P68036	154 aa	Known RBP	11.22	□□□□□ -0.61
HDLBP-223	ENST00000449864	KIR3DS1	Q14943	382 aa		11.22	□□□□□ -0.61
HDLBP-223	ENST00000449864	KHDC3L	Q587J8	217 aa		11.22	□□□□□ -0.61
HDLBP-223	ENST00000449864	ZNF493	Q6ZR52	646 aa		11.22	□□□□□ -0.61
HDLBP-223	ENST00000449864	CCDC28A	Q8IWP9	274 aa		11.22	□□□□□ -0.61
HDLBP-223	ENST00000449864	TMEM263	Q8WUH6	116 aa	Known RBP	11.22	□□□□□ -0.61
HDLBP-223	ENST00000449864	RNF141	Q8WVD5	230 aa		11.22	□□□□□ -0.61
HDLBP-223	ENST00000449864	TRAV12-3	A0A0B4J271	114 aa		11.21	□□□□□ -0.61
HDLBP-223	ENST00000449864	PLAC8L1	A1L4L8	177 aa		11.21	□□□□□ -0.61
HDLBP-223	ENST00000449864	TAS2R45	P59539	299 aa		11.21	□□□□□ -0.61
HDLBP-223	ENST00000449864	ERCC8	Q13216	396 aa		11.21	□□□□□ -0.61
HDLBP-223	ENST00000449864	FCN2	Q15485	313 aa		11.21	□□□□□ -0.61
HDLBP-223	ENST00000449864	UBE2DNL	Q8IWF7	75 aa		11.21	□□□□□ -0.61
HDLBP-223	ENST00000449864	FXYD5	Q96DB9	178 aa		11.21	□□□□□ -0.61
HDLBP-223	ENST00000449864	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	11.21	□□□□□ -0.61
HDLBP-223	ENST00000449864	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.2	□□□□□ -0.62
HDLBP-223	ENST00000449864	IGKV2D-40	P01614	121 aa	Predicted RBP	11.2	□□□□□ -0.62
HDLBP-223	ENST00000449864	TMEM78	Q5T7P6	136 aa		11.2	□□□□□ -0.62
HDLBP-223	ENST00000449864	TMEM88	Q6PEY1	159 aa		11.2	□□□□□ -0.62
HDLBP-223	ENST00000449864	RNASE8	Q8TDE3	154 aa	Known RBP	11.2	□□□□□ -0.62
HDLBP-223	ENST00000449864	PHYHIPL	Q96FC7	376 aa		11.2	□□□□□ -0.62
HDLBP-223	ENST00000449864	SLC25A5	P05141	298 aa	Known RBP	11.19	□□□□□ -0.62
HDLBP-223	ENST00000449864	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.19	□□□□□ -0.62
HDLBP-223	ENST00000449864	LINC00477	Q96M19	166 aa		11.19	□□□□□ -0.62
HDLBP-223	ENST00000449864	WFDC1	Q9HC57	220 aa		11.19	□□□□□ -0.62
HDLBP-223	ENST00000449864	NOP10	Q9NPE3	64 aa	Known RBP	11.19	□□□□□ -0.62
HDLBP-223	ENST00000449864	NACA	E9PAV3	2078 aa		11.19	□□□□□ -0.62
HDLBP-223	ENST00000449864	EPPK1	P58107	5090 aa	Known RBP	11.18	□□□□□ -0.62
HDLBP-223	ENST00000449864		A0A1W2PPV4	95 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms