RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 DHRS3O75911 302 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 TMEM50AO95807 157 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 GYPBP06028 91 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 H2BFMP0C1H6 154 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 ZNF19P17023 458 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 SDC2P34741 201 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 GZMMP51124 257 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 MLLT11Q13015 90 aaPredicted RBP3.22□□□□□ -1.89
SDCBP-205ENST00000447267 FXYD3Q14802 87 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 FAM106AQ4KMX7 169 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 LINC01590Q5TEZ4 76 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 FAM78BQ5VT40 261 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 ODF3L1Q8IXM7 274 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 FER1L6-AS1Q8NA97 138 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 OR4A4PQ8NGN8 299 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 PLPPR1Q8TBJ4 325 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 OR51E1Q8TCB6 317 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 GPR82Q96P67 336 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 C20orf24Q9BUV8 137 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 PBDC1Q9BVG4 233 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 MAP1LC3CQ9BXW4 147 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 LPAR5Q9H1C0 372 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 GTSF1LQ9H1H1 148 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 RBKSQ9H477 322 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 TMEM231Q9H6L2 316 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 RAB9BQ9NP90 201 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 LYRM2Q9NU23 88 aaPredicted RBP3.22□□□□□ -1.89
SDCBP-205ENST00000447267 NAT8Q9UHE5 227 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 OR51B2Q9Y5P1 312 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 FXYD6-FXYD2A0A087WZ82 144 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 TRBV9A0A0B4J1U6 114 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 IGKV1-12A0A0C4DH73 117 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 A0A1B0GU03 582 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 LRCOL1A6NCL2 159 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 FAM90A7PA6NKC0 464 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 FAM90A23PA8MXZ1 464 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 F5H768 121 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 SDCBPO00560 298 aaPredicted RBP3.21□□□□□ -1.9
SDCBP-205ENST00000447267 ARPC2O15144 300 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 SOCS1O15524 211 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 BCL2L11O43521 198 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 CDRT1O95170 752 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 ZNF682O95780 498 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 IGKV1D-12P01611 117 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 CRYGBP07316 175 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 CFC1BP0CG36 223 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 CFC1P0CG37 223 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 SMIM17P0DL12 118 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 PSMA1P25786 263 aaKnown RBP3.21□□□□□ -1.9
SDCBP-205ENST00000447267 BTCP35070 178 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 SULT1A1P50225 295 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 MTPNP58546 118 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 TAS2R30P59541 319 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 EFNB1P98172 346 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 CDK5Q00535 292 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 ZNF266Q14584 549 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 POU2AF1Q16633 256 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 CNIH2Q6PI25 160 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 Q6ZSR3 168 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 SYS1Q8N2H4 156 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 C5orf17Q8NAS9 161 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 CHST4Q8NCG5 386 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 TMEM116Q8NCL8 245 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 OR6N2Q8NGY6 317 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 LYPD6BQ8NI32 183 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 GGHQ92820 318 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 CIB3Q96Q77 187 aaPredicted RBP3.21□□□□□ -1.9
SDCBP-205ENST00000447267 OR2A7Q96R45 310 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 MGLLQ99685 303 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 PSMG3Q9BT73 122 aaPredicted RBP3.21□□□□□ -1.9
SDCBP-205ENST00000447267 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 PBOV1Q9GZY1 135 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 FXYD6Q9H0Q3 95 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 OR52D1Q9H346 318 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 PPDPFQ9H3Y8 114 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 FKBP11Q9NYL4 201 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 VAX2Q9UIW0 290 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 HSPB8Q9UJY1 196 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 ERG28Q9UKR5 140 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 GPR132Q9UNW8 380 aa3.21□□□□□ -1.9
SDCBP-205ENST00000447267 AK6Q9Y3D8 172 aaKnown RBP3.21□□□□□ -1.9
SDCBP-205ENST00000447267 TRAV24A0A0B4J272 114 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 A0A0J9YXV3 536 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 KANTRA0A1W2PQU2 76 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 FAM223BA6NKX1 122 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 ZNF670-ZNF695F2Z2N8 137 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 H7BYZ3 331 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 CST1P01037 141 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 MAS1P04201 325 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 TRGC1P0CF51 173 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 CAV2P51636 162 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 DEFB131AP59861 70 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 DAD1P61803 113 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 SRPXP78539 464 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 IL13RA2Q14627 380 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 GINS1Q14691 196 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 PRR4Q16378 134 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 TMEM183BQ1AE95 376 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 TDRG1Q3Y452 100 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 COA6Q5JTJ3 125 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms