RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 PRR30Q53SZ7 412 aaPredicted RBP13.27□□□□□ -0.29
TCOF1-206ENST00000445265 TMEM213A2RRL7 107 aa13.26□□□□□ -0.29
TCOF1-206ENST00000445265 INS-IGF2F8WCM5 200 aa13.26□□□□□ -0.29
TCOF1-206ENST00000445265 IGF2-ASQ6U949 168 aa13.26□□□□□ -0.29
TCOF1-206ENST00000445265 GLMPQ8WWB7 406 aa13.26□□□□□ -0.29
TCOF1-206ENST00000445265 FAM167A-AS1Q96KT0 104 aa13.26□□□□□ -0.29
TCOF1-206ENST00000445265 SMKR1H3BMG3 65 aa13.25□□□□□ -0.29
TCOF1-206ENST00000445265 UNQ6494/PRO21346Q6UXR6 183 aa13.25□□□□□ -0.29
TCOF1-206ENST00000445265 IGF2BP2-AS1Q96M15 143 aa13.25□□□□□ -0.29
TCOF1-206ENST00000445265 CHTOPQ9Y3Y2 248 aaKnown RBP13.25□□□□□ -0.29
TCOF1-206ENST00000445265 LINC00477Q96M19 166 aa13.25□□□□□ -0.29
TCOF1-206ENST00000445265 DUX5Q96PT3 197 aa13.25□□□□□ -0.29
TCOF1-206ENST00000445265 LINC00527Q9UJ94 153 aa13.25□□□□□ -0.29
TCOF1-206ENST00000445265 IGKV1OR2-108A0A075B7D4 117 aa13.25□□□□□ -0.29
TCOF1-206ENST00000445265 COX6B1P14854 86 aa13.25□□□□□ -0.29
TCOF1-206ENST00000445265 ASPHD1Q5U4P2 390 aa13.25□□□□□ -0.29
TCOF1-206ENST00000445265 ZC2HC1AQ96GY0 325 aa13.25□□□□□ -0.29
TCOF1-206ENST00000445265 CD7P09564 240 aa13.25□□□□□ -0.29
TCOF1-206ENST00000445265 EIF4EBP1Q13541 118 aaPredicted RBP13.25□□□□□ -0.29
TCOF1-206ENST00000445265 PATE2Q6UY27 113 aa13.25□□□□□ -0.29
TCOF1-206ENST00000445265 FAM110DQ8TAY7 271 aaPredicted RBP13.25□□□□□ -0.29
TCOF1-206ENST00000445265 C8orf49Q96NF6 230 aa13.25□□□□□ -0.29
TCOF1-206ENST00000445265 TRAV40A0A0B4J280 105 aa13.24□□□□□ -0.29
TCOF1-206ENST00000445265 K7ENP7 123 aa13.24□□□□□ -0.29
TCOF1-206ENST00000445265 NPFFO15130 113 aa13.24□□□□□ -0.29
TCOF1-206ENST00000445265 SEM1Q6ZVN7 128 aa13.24□□□□□ -0.29
TCOF1-206ENST00000445265 BCL6BQ8N143 479 aaPredicted RBP13.24□□□□□ -0.29
TCOF1-206ENST00000445265 PRR25Q96S07 402 aa13.24□□□□□ -0.29
TCOF1-206ENST00000445265 A0A1B0GWB2 263 aa13.24□□□□□ -0.29
TCOF1-206ENST00000445265 SAMD5Q5TGI4 173 aa13.24□□□□□ -0.29
TCOF1-206ENST00000445265 CEP192Q8TEP8 1941 aa13.24□□□□□ -0.29
TCOF1-206ENST00000445265 TNCP24821 2201 aa13.24□□□□□ -0.29
TCOF1-206ENST00000445265 SMAD7O15105 426 aaKnown RBP13.24□□□□□ -0.29
TCOF1-206ENST00000445265 NPSP0C0P6 89 aa13.24□□□□□ -0.29
TCOF1-206ENST00000445265 MSMPQ1L6U9 139 aa13.24□□□□□ -0.29
TCOF1-206ENST00000445265 MORN5Q5VZ52 161 aa13.24□□□□□ -0.29
TCOF1-206ENST00000445265 GTSCR1Q86UQ5 136 aa13.24□□□□□ -0.29
TCOF1-206ENST00000445265 TMEM158Q8WZ71 300 aa13.24□□□□□ -0.29
TCOF1-206ENST00000445265 ESDP10768 282 aa13.24□□□□□ -0.29
TCOF1-206ENST00000445265 ZNF491Q8N8L2 437 aa13.24□□□□□ -0.29
TCOF1-206ENST00000445265 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.24□□□□□ -0.299e-7■■■■□ 22.6
TCOF1-206ENST00000445265 TMEM219Q86XT9 240 aa13.23□□□□□ -0.29
TCOF1-206ENST00000445265 CGB3P0DN86 165 aa13.23□□□□□ -0.29
TCOF1-206ENST00000445265 CGB7P0DN87 165 aa13.23□□□□□ -0.29
TCOF1-206ENST00000445265 EML5Q05BV3 1969 aa13.23□□□□□ -0.29
TCOF1-206ENST00000445265 WDR87Q6ZQQ6 2873 aa13.23□□□□□ -0.29
TCOF1-206ENST00000445265 TNFRSF6BO95407 300 aa13.23□□□□□ -0.29
TCOF1-206ENST00000445265 PLNP26678 52 aa13.22□□□□□ -0.29
TCOF1-206ENST00000445265 SAA4P35542 130 aa13.22□□□□□ -0.29
TCOF1-206ENST00000445265 GEMIN7Q9H840 131 aaKnown RBP13.22□□□□□ -0.29
TCOF1-206ENST00000445265 ZC2HC1BQ5TFG8 222 aa13.22□□□□□ -0.29
TCOF1-206ENST00000445265 ZNF256Q9Y2P7 627 aaPredicted RBP13.22□□□□□ -0.29
TCOF1-206ENST00000445265 TNFRSF18Q9Y5U5 241 aa13.22□□□□□ -0.29
TCOF1-206ENST00000445265 APOMO95445 188 aa13.22□□□□□ -0.29
TCOF1-206ENST00000445265 UBE2E1P51965 193 aa13.22□□□□□ -0.29
TCOF1-206ENST00000445265 STPG4Q8N801 248 aa13.22□□□□□ -0.29
TCOF1-206ENST00000445265 ZNF479Q96JC4 524 aa13.22□□□□□ -0.29
TCOF1-206ENST00000445265 DPH3P1Q9H4G8 78 aa13.22□□□□□ -0.29
TCOF1-206ENST00000445265 SHISA9B4DS77 424 aa13.22□□□□□ -0.29
TCOF1-206ENST00000445265 GP9P14770 177 aa13.22□□□□□ -0.29
TCOF1-206ENST00000445265 ERCC8Q13216 396 aa13.22□□□□□ -0.29
TCOF1-206ENST00000445265 FAM223BA6NKX1 122 aa13.21□□□□□ -0.29
TCOF1-206ENST00000445265 CIRBPQ14011 172 aaKnown RBP13.21□□□□□ -0.29
TCOF1-206ENST00000445265 FAM223AQ8IWN6 122 aa13.21□□□□□ -0.29
TCOF1-206ENST00000445265 ZFHX2Q9C0A1 2572 aaPredicted RBP13.21□□□□□ -0.29
TCOF1-206ENST00000445265 TEX29Q8N6K0 151 aa13.21□□□□□ -0.29
TCOF1-206ENST00000445265 NCKAP5O14513 1909 aa13.21□□□□□ -0.29
TCOF1-206ENST00000445265 NDPQ00604 133 aa13.21□□□□□ -0.3
TCOF1-206ENST00000445265 KIR3DS1Q14943 382 aa13.21□□□□□ -0.3
TCOF1-206ENST00000445265 DAZAP2Q15038 168 aaPredicted RBP13.21□□□□□ -0.3
TCOF1-206ENST00000445265 MRPL51Q4U2R6 128 aaKnown RBP13.21□□□□□ -0.3
TCOF1-206ENST00000445265 CHD3Q12873 2000 aaKnown RBP13.21□□□□□ -0.3
TCOF1-206ENST00000445265 DUSP14O95147 198 aaKnown RBP13.2□□□□□ -0.3
TCOF1-206ENST00000445265 DNAH12Q6ZR08 3092 aa13.2□□□□□ -0.3
TCOF1-206ENST00000445265 LGALS9BQ3B8N2 356 aa13.2□□□□□ -0.3
TCOF1-206ENST00000445265 LGALS9CQ6DKI2 356 aa13.2□□□□□ -0.3
TCOF1-206ENST00000445265 USMG5Q96IX5 58 aa13.2□□□□□ -0.3
TCOF1-206ENST00000445265 C22orf46C9J442 243 aa13.2□□□□□ -0.3
TCOF1-206ENST00000445265 COX8AP10176 69 aa13.2□□□□□ -0.3
TCOF1-206ENST00000445265 ZNF815PA8K554 130 aa13.2□□□□□ -0.3
TCOF1-206ENST00000445265 WISP2O76076 250 aa13.2□□□□□ -0.3
TCOF1-206ENST00000445265 TDRG1Q3Y452 100 aa13.2□□□□□ -0.3
TCOF1-206ENST00000445265 ATP6V0E1O15342 81 aa13.19□□□□□ -0.3
TCOF1-206ENST00000445265 NAA38Q9BRA0 125 aaKnown RBP13.19□□□□□ -0.3
TCOF1-206ENST00000445265 MEGF9Q9H1U4 602 aa13.19□□□□□ -0.3
TCOF1-206ENST00000445265 SIGLEC8Q9NYZ4 499 aa13.19□□□□□ -0.3
TCOF1-206ENST00000445265 HOXA3O43365 443 aaPredicted RBP13.18□□□□□ -0.3
TCOF1-206ENST00000445265 COPS9Q8WXC6 57 aa13.18□□□□□ -0.3
TCOF1-206ENST00000445265 KLF12Q9Y4X4 402 aa13.18□□□□□ -0.3
TCOF1-206ENST00000445265 GAGE12BA1L429 117 aa13.18□□□□□ -0.3
TCOF1-206ENST00000445265 LINC00574Q9H8X3 128 aa13.18□□□□□ -0.3
TCOF1-206ENST00000445265 PLA2G5P39877 138 aa13.18□□□□□ -0.3
TCOF1-206ENST00000445265 BPESC1Q9GZL8 116 aa13.18□□□□□ -0.3
TCOF1-206ENST00000445265 JMJD8Q96S16 334 aa13.18□□□□□ -0.3
TCOF1-206ENST00000445265 IGKV1-17P01599 117 aa13.17□□□□□ -0.3
TCOF1-206ENST00000445265 MAJINQ3KP22 176 aa13.17□□□□□ -0.3
TCOF1-206ENST00000445265 C19orf54Q5BKX5 351 aa13.17□□□□□ -0.3
TCOF1-206ENST00000445265 C17orf77Q96MU5 243 aa13.17□□□□□ -0.3
TCOF1-206ENST00000445265 ANKHD1Q8IWZ3 2542 aaKnown RBP13.17□□□□□ -0.3
TCOF1-206ENST00000445265 IGHV3OR16-12A0A075B7B8 117 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms