RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 OR10AG1Q8NH19 301 aa12.94□□□□□ -0.34
SEMA3B-207ENST00000441915 ARPC1AQ92747 370 aa12.94□□□□□ -0.34
SEMA3B-207ENST00000441915 MCRIP2Q9BUT9 160 aaKnown RBP12.94□□□□□ -0.34
SEMA3B-207ENST00000441915 THYN1Q9P016 225 aa12.94□□□□□ -0.34
SEMA3B-207ENST00000441915 A0A1W2PRD5 423 aa12.93□□□□□ -0.34
SEMA3B-207ENST00000441915 A0A1W2PRF3 423 aa12.93□□□□□ -0.34
SEMA3B-207ENST00000441915 A0A1W2PRM7 423 aa12.93□□□□□ -0.34
SEMA3B-207ENST00000441915 PRTN3P24158 256 aa12.93□□□□□ -0.34
SEMA3B-207ENST00000441915 MS4A6AQ9H2W1 248 aa12.93□□□□□ -0.34
SEMA3B-207ENST00000441915 C21orf62Q9NYP8 219 aa12.93□□□□□ -0.34
SEMA3B-207ENST00000441915 DCHS2Q6V1P9 2916 aa12.93□□□□□ -0.34
SEMA3B-207ENST00000441915 TMEM189A5PLL7 270 aa12.93□□□□□ -0.34
SEMA3B-207ENST00000441915 NCBP2LA6PVI3 153 aaKnown RBP12.93□□□□□ -0.34
SEMA3B-207ENST00000441915 ODF3BA8MYP8 253 aa12.93□□□□□ -0.34
SEMA3B-207ENST00000441915 FOXC1Q12948 553 aa12.93□□□□□ -0.34
SEMA3B-207ENST00000441915 LINC01545Q5VT33 79 aa12.93□□□□□ -0.34
SEMA3B-207ENST00000441915 AMMECR1LQ6DCA0 310 aa12.93□□□□□ -0.34
SEMA3B-207ENST00000441915 OR2T8A6NH00 312 aa12.92□□□□□ -0.34
SEMA3B-207ENST00000441915 ZNF747Q9BV97 191 aa12.92□□□□□ -0.34
SEMA3B-207ENST00000441915 MEGF9Q9H1U4 602 aa12.92□□□□□ -0.34
SEMA3B-207ENST00000441915 SCRT2Q9NQ03 307 aa12.92□□□□□ -0.34
SEMA3B-207ENST00000441915 SPTA1P02549 2419 aa12.92□□□□□ -0.34
SEMA3B-207ENST00000441915 GAGE12BA1L429 117 aa12.92□□□□□ -0.34
SEMA3B-207ENST00000441915 F8W735 103 aaPredicted RBP12.92□□□□□ -0.34
SEMA3B-207ENST00000441915 RPL7P18124 248 aaKnown RBP12.92□□□□□ -0.34
SEMA3B-207ENST00000441915 LYZL1Q6UWQ5 148 aa12.92□□□□□ -0.34
SEMA3B-207ENST00000441915 TTC9CQ8N5M4 171 aa12.92□□□□□ -0.34
SEMA3B-207ENST00000441915 CEP295Q9C0D2 2601 aa12.92□□□□□ -0.34
SEMA3B-207ENST00000441915 TMSB15BA0A087X1C1 80 aa12.91□□□□□ -0.34
SEMA3B-207ENST00000441915 NUDT3O95989 172 aa12.91□□□□□ -0.34
SEMA3B-207ENST00000441915 CCDC144NLQ6NUI1 221 aa12.91□□□□□ -0.34
SEMA3B-207ENST00000441915 PMCHL2Q9BQD1 86 aa12.91□□□□□ -0.34
SEMA3B-207ENST00000441915 PTPRQQ9UMZ3 2332 aa12.91□□□□□ -0.34
SEMA3B-207ENST00000441915 MUC6Q6W4X9 2439 aa12.91□□□□□ -0.34
SEMA3B-207ENST00000441915 D6R8Y8 96 aa12.9□□□□□ -0.34
SEMA3B-207ENST00000441915 CCL21O00585 134 aa12.9□□□□□ -0.34
SEMA3B-207ENST00000441915 SH2D1AO60880 128 aa12.9□□□□□ -0.34
SEMA3B-207ENST00000441915 SCGB2A1O75556 95 aa12.9□□□□□ -0.34
SEMA3B-207ENST00000441915 NDPQ00604 133 aa12.9□□□□□ -0.34
SEMA3B-207ENST00000441915 C12orf54Q6X4T0 127 aa12.9□□□□□ -0.34
SEMA3B-207ENST00000441915 DEFB125Q8N687 156 aa12.9□□□□□ -0.34
SEMA3B-207ENST00000441915 IFI27P40305 119 aaPredicted RBP12.9□□□□□ -0.34
SEMA3B-207ENST00000441915 RIPPLY3P57055 190 aa12.9□□□□□ -0.34
SEMA3B-207ENST00000441915 TMEM238LA0A1B0GVL6 79 aa12.9□□□□□ -0.35
SEMA3B-207ENST00000441915 IGHV3-23P01764 117 aa12.9□□□□□ -0.35
SEMA3B-207ENST00000441915 FAM104BQ5XKR9 115 aa12.9□□□□□ -0.35
SEMA3B-207ENST00000441915 IGKV2-40A0A087WW87 121 aaPredicted RBP12.89□□□□□ -0.35
SEMA3B-207ENST00000441915 TMEM213A2RRL7 107 aa12.89□□□□□ -0.35
SEMA3B-207ENST00000441915 IGKV2D-40P01614 121 aaPredicted RBP12.89□□□□□ -0.35
SEMA3B-207ENST00000441915 ORMDL3Q8N138 153 aa12.89□□□□□ -0.35
SEMA3B-207ENST00000441915 LOC389332A0A1B0GUA5 103 aa12.89□□□□□ -0.35
SEMA3B-207ENST00000441915 FBLL1A6NHQ2 334 aaKnown RBP12.89□□□□□ -0.35
SEMA3B-207ENST00000441915 PRSS47A8MTI9 375 aa12.89□□□□□ -0.35
SEMA3B-207ENST00000441915 BVES-AS1Q5T3Y7 98 aa12.89□□□□□ -0.35
SEMA3B-207ENST00000441915 COX8CQ7Z4L0 72 aa12.89□□□□□ -0.35
SEMA3B-207ENST00000441915 AMN1Q8IY45 258 aa12.89□□□□□ -0.35
SEMA3B-207ENST00000441915 PRELID3AQ96N28 172 aa12.89□□□□□ -0.35
SEMA3B-207ENST00000441915 PRR25Q96S07 402 aa12.89□□□□□ -0.35
SEMA3B-207ENST00000441915 VMO1Q7Z5L0 202 aa12.88□□□□□ -0.35
SEMA3B-207ENST00000441915 RABAC1Q9UI14 185 aa12.88□□□□□ -0.35
SEMA3B-207ENST00000441915 SIGLEC8Q9NYZ4 499 aa12.88□□□□□ -0.35
SEMA3B-207ENST00000441915 FAM106CPP0CH98 169 aa12.87□□□□□ -0.35
SEMA3B-207ENST00000441915 FAM106AQ4KMX7 169 aa12.87□□□□□ -0.35
SEMA3B-207ENST00000441915 DYNAPQ8N1N2 210 aa12.87□□□□□ -0.35
SEMA3B-207ENST00000441915 U3KQK5 164 aa12.87□□□□□ -0.35
SEMA3B-207ENST00000441915 OOSP1A8MZH6 123 aa12.87□□□□□ -0.35
SEMA3B-207ENST00000441915 SAP30O75446 220 aa12.87□□□□□ -0.35
SEMA3B-207ENST00000441915 CTSGP08311 255 aa12.87□□□□□ -0.35
SEMA3B-207ENST00000441915 BMI1P35226 326 aa12.87□□□□□ -0.35
SEMA3B-207ENST00000441915 HIST1H1AQ02539 215 aaPredicted RBP12.87□□□□□ -0.35
SEMA3B-207ENST00000441915 MUC21A0A0G2JKD1 596 aa12.86□□□□□ -0.35
SEMA3B-207ENST00000441915 MUC21A0A140T8X8 626 aa12.86□□□□□ -0.35
SEMA3B-207ENST00000441915 MUC21Q5SSG8 566 aa12.86□□□□□ -0.35
SEMA3B-207ENST00000441915 C1orf122Q6ZSJ8 110 aa12.86□□□□□ -0.35
SEMA3B-207ENST00000441915 Q8N6K4 173 aa12.86□□□□□ -0.35
SEMA3B-207ENST00000441915 OR8A1Q8NGG7 326 aa12.86□□□□□ -0.35
SEMA3B-207ENST00000441915 A0A096LNJ9 63 aa12.86□□□□□ -0.35
SEMA3B-207ENST00000441915 NDUFS8O00217 210 aa12.86□□□□□ -0.35
SEMA3B-207ENST00000441915 NCR2O95944 276 aa12.86□□□□□ -0.35
SEMA3B-207ENST00000441915 EGR2P11161 476 aaPredicted RBP12.86□□□□□ -0.35
SEMA3B-207ENST00000441915 COX8AP10176 69 aa12.85□□□□□ -0.35
SEMA3B-207ENST00000441915 LOXL1Q08397 574 aaPredicted RBP12.85□□□□□ -0.35
SEMA3B-207ENST00000441915 EBI3Q14213 229 aa12.85□□□□□ -0.35
SEMA3B-207ENST00000441915 CDSNQ15517 529 aa12.85□□□□□ -0.35
SEMA3B-207ENST00000441915 MRPL51Q4U2R6 128 aaKnown RBP12.85□□□□□ -0.35
SEMA3B-207ENST00000441915 FER1L6-AS1Q8NA97 138 aa12.85□□□□□ -0.35
SEMA3B-207ENST00000441915 Q8TAT8 98 aa12.85□□□□□ -0.35
SEMA3B-207ENST00000441915 TWIST1Q15672 202 aa12.85□□□□□ -0.35
SEMA3B-207ENST00000441915 MINOS1Q5TGZ0 78 aa12.85□□□□□ -0.35
SEMA3B-207ENST00000441915 C11orf71Q6IPW1 123 aa12.85□□□□□ -0.35
SEMA3B-207ENST00000441915 MINOS1-NBL1R4GNA1 71 aa12.85□□□□□ -0.35
SEMA3B-207ENST00000441915 WNK2Q9Y3S1 2297 aa12.85□□□□□ -0.35
SEMA3B-207ENST00000441915 A0A087X0K7 114 aa12.84□□□□□ -0.35
SEMA3B-207ENST00000441915 CD5LO43866 347 aa12.84□□□□□ -0.35
SEMA3B-207ENST00000441915 VGLL1Q99990 258 aa12.84□□□□□ -0.35
SEMA3B-207ENST00000441915 SMAD5-AS1Q9Y6J3 95 aa12.84□□□□□ -0.35
SEMA3B-207ENST00000441915 IGHV7-81A0A0B4J1V7 117 aa12.84□□□□□ -0.35
SEMA3B-207ENST00000441915 TRAV8-6A0A0B4J262 113 aa12.84□□□□□ -0.35
SEMA3B-207ENST00000441915 CKS2P33552 79 aa12.84□□□□□ -0.35
SEMA3B-207ENST00000441915 NBASA2RRP1 2371 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms