RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 SMG1Q96Q15 3661 aaKnown RBP3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 GCN1Q92616 2671 aaKnown RBP3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 FNDC1Q4ZHG4 1894 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 PLXNA4Q9HCM2 1894 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 ANKRD36A6QL64 1941 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 FASNP49327 2511 aaKnown RBP3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 USP24Q9UPU5 2620 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 NYNRINQ9P2P1 1898 aaKnown RBP3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 TRAV8-1A0A0A6YYK1 113 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 TRAV1-1A0A0B4J248 108 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 A0A0D9SEW6 157 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 CYSRT1A8MQ03 144 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 LOC730098B7Z3J9 87 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 NDUFB3O43676 98 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 CST7O76096 145 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 NGFP01138 241 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 IGLV3-27P01718 113 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 ATP1B1P05026 303 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 MDKP21741 143 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 UBE2G1P62253 170 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 CCL14Q16627 93 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 LGALS9CQ6DKI2 356 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 Q6ZQT7 251 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 Q6ZS49 121 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 BAGE3Q86Y29 109 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 BAGE2Q86Y30 109 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 APCDD1LQ8NCL9 501 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 FGF13Q92913 245 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 C2orf50Q96LR7 162 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 UPK3BQ9BT76 320 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 CHAC1Q9BUX1 264 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 C11orf68Q9H3H3 251 aaKnown RBP3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 CTSZQ9UBR2 303 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 MYLKQ15746 1914 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 ZFC3H1O60293 1989 aaKnown RBP3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 PTPRZ1P23471 2315 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 TPRP12270 2363 aaKnown RBP3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 GVINP1Q7Z2Y8 2422 aa3.61□□□□□ -1.83
HMGB3P9-201ENST00000441799 ANKRD12Q6UB98 2062 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 LY6G6EA0A0G2JKS1 128 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 TRBV27A0A0K0K1C4 114 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 PGPA6NDG6 321 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 IGLL5B9A064 214 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 H3BP45 60 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 M0R378 163 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 FFAR1O14842 300 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 IL3RAP26951 378 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 SSR2P43308 183 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 CSN1S1P47710 185 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 SMIM11AP58511 58 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 SNRPGP62308 76 aaKnown RBP3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 NOXRED1Q6NXP6 359 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 FP248Q71RG6 208 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 RAB42Q8N4Z0 105 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 PRSS3P2Q8NHM4 247 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 FAM57AQ8TBR7 257 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 DCANP1Q8TF63 244 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 C18orf12Q96KH6 178 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 C4orf45Q96LM5 186 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 ODF3Q96PU9 254 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 SPACA5Q96QH8 159 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 HDHD3Q9BSH5 251 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 RNF126Q9BV68 326 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 HIGD1BQ9P298 99 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 F11RQ9Y624 299 aaKnown RBP3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 KCNE3Q9Y6H6 103 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 PATJQ8NI35 1801 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 GPR179Q6PRD1 2367 aa3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 TDRD15B5MCY1 1934 aaKnown RBP3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 TRIP12Q14669 1992 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 TCF20Q9UGU0 1960 aaKnown RBP3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 RIF1Q5UIP0 2472 aaKnown RBP3.6□□□□□ -1.83
HMGB3P9-201ENST00000441799 LTBP2Q14767 1821 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 IGLV1-36A0A0B4J1U3 117 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 TRAV41A0A0B4J266 112 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 MDFIC2A0A1B0GVS7 189 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 A0A1W2PS18 150 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 KLLNB2CW77 178 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 ZNF736B4DX44 427 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 H0Y9J4 135 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 UPK2O00526 184 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 WNT9BO14905 357 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 TIMM23O14925 209 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 UBE2L6O14933 153 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 NDUFS7O75251 213 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 APCSP02743 223 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 LGALS3P17931 250 aaKnown RBP3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 B3GALT5-AS1P59052 145 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 HIST1H4AP62805 103 aaKnown RBP3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 CCL8P80075 99 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 RPL7L1Q6DKI1 246 aaKnown RBP3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 CLEC19AQ6UXS0 136 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 Q6ZVQ6 151 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 PHF5AQ7RTV0 110 aaKnown RBP3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 MKXQ8IYA7 352 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 C10orf105Q8TEF2 133 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 ZNF721Q8TF20 911 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 LYZL4Q96KX0 146 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 MGST2Q99735 147 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 CKLFQ9UBR5 152 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms