RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 SIX6O95475 246 aa8.4□□□□□ -1.06
PDGFB-203ENST00000440375 CDKN1BP46527 198 aa8.4□□□□□ -1.06
PDGFB-203ENST00000440375 SULT1A1P50225 295 aa8.4□□□□□ -1.06
PDGFB-203ENST00000440375 TAS2R60P59551 318 aa8.4□□□□□ -1.06
PDGFB-203ENST00000440375 B2MP61769 119 aa8.4□□□□□ -1.06
PDGFB-203ENST00000440375 BAXQ07812 192 aa8.4□□□□□ -1.06
PDGFB-203ENST00000440375 GFI1BQ5VTD9 330 aa8.4□□□□□ -1.06
PDGFB-203ENST00000440375 Q6ZR54 194 aa8.4□□□□□ -1.06
PDGFB-203ENST00000440375 LINC00336Q6ZUF6 198 aa8.4□□□□□ -1.06
PDGFB-203ENST00000440375 KRTAP17-1Q9BYP8 105 aa8.4□□□□□ -1.06
PDGFB-203ENST00000440375 DNAJC4Q9NNZ3 241 aa8.4□□□□□ -1.06
PDGFB-203ENST00000440375 RNF24Q9Y225 148 aa8.4□□□□□ -1.06
PDGFB-203ENST00000440375 PKD1P98161 4303 aa8.4□□□□□ -1.06
PDGFB-203ENST00000440375 SSNA1O43805 119 aa8.39□□□□□ -1.07
PDGFB-203ENST00000440375 PVALBP20472 110 aaPredicted RBP8.39□□□□□ -1.07
PDGFB-203ENST00000440375 FGF7P21781 194 aa8.39□□□□□ -1.07
PDGFB-203ENST00000440375 RAB31Q13636 194 aa8.39□□□□□ -1.07
PDGFB-203ENST00000440375 LGALS9BQ3B8N2 356 aa8.39□□□□□ -1.07
PDGFB-203ENST00000440375 GCSAMLQ5JQS6 135 aa8.39□□□□□ -1.07
PDGFB-203ENST00000440375 TMEM256Q8N2U0 113 aa8.39□□□□□ -1.07
PDGFB-203ENST00000440375 RNASE8Q8TDE3 154 aaKnown RBP8.39□□□□□ -1.07
PDGFB-203ENST00000440375 SLC39A9Q9NUM3 307 aa8.39□□□□□ -1.07
PDGFB-203ENST00000440375 ZNF586Q9NXT0 402 aa8.39□□□□□ -1.07
PDGFB-203ENST00000440375 ALG5Q9Y673 324 aa8.39□□□□□ -1.07
PDGFB-203ENST00000440375 PXMP4Q9Y6I8 212 aa8.39□□□□□ -1.07
PDGFB-203ENST00000440375 NACAE9PAV3 2078 aa8.39□□□□□ -1.07
PDGFB-203ENST00000440375 DYNC1H1Q14204 4646 aaKnown RBP8.39□□□□□ -1.07
PDGFB-203ENST00000440375 PRSS29PA6NIE9 313 aa8.38□□□□□ -1.07
PDGFB-203ENST00000440375 F5H768 121 aa8.38□□□□□ -1.07
PDGFB-203ENST00000440375 J3KRW8 73 aa8.38□□□□□ -1.07
PDGFB-203ENST00000440375 S100A11P31949 105 aa8.38□□□□□ -1.07
PDGFB-203ENST00000440375 RPL29P47914 159 aaKnown RBP8.38□□□□□ -1.07
PDGFB-203ENST00000440375 RGS21Q2M5E4 152 aa8.38□□□□□ -1.07
PDGFB-203ENST00000440375 Q6ZRG5 221 aa8.38□□□□□ -1.07
PDGFB-203ENST00000440375 STX12Q86Y82 276 aa8.38□□□□□ -1.07
PDGFB-203ENST00000440375 OR1L4Q8NGR5 311 aa8.38□□□□□ -1.07
PDGFB-203ENST00000440375 OR10J6PQ8NGY7 276 aa8.38□□□□□ -1.07
PDGFB-203ENST00000440375 C16orf74Q96GX8 76 aa8.38□□□□□ -1.07
PDGFB-203ENST00000440375 NOP10Q9NPE3 64 aaKnown RBP8.38□□□□□ -1.07
PDGFB-203ENST00000440375 NPIPB6E9PJ23 425 aa8.37□□□□□ -1.07
PDGFB-203ENST00000440375 H7BYZ3 331 aa8.37□□□□□ -1.07
PDGFB-203ENST00000440375 M0R3E3 92 aa8.37□□□□□ -1.07
PDGFB-203ENST00000440375 NDUFB4O95168 129 aa8.37□□□□□ -1.07
PDGFB-203ENST00000440375 CT45A10P0DMU9 189 aa8.37□□□□□ -1.07
PDGFB-203ENST00000440375 PYYP10082 97 aa8.37□□□□□ -1.07
PDGFB-203ENST00000440375 HBG1P69891 147 aa8.37□□□□□ -1.07
PDGFB-203ENST00000440375 HBG2P69892 147 aa8.37□□□□□ -1.07
PDGFB-203ENST00000440375 RNF212Q495C1 297 aa8.37□□□□□ -1.07
PDGFB-203ENST00000440375 C15orf53Q8NAA6 179 aa8.37□□□□□ -1.07
PDGFB-203ENST00000440375 THAP6Q8TBB0 222 aa8.37□□□□□ -1.07
PDGFB-203ENST00000440375 TMEM263Q8WUH6 116 aaKnown RBP8.37□□□□□ -1.07
PDGFB-203ENST00000440375 PFDN5Q99471 154 aa8.37□□□□□ -1.07
PDGFB-203ENST00000440375 OR5AC2Q9NZP5 309 aa8.37□□□□□ -1.07
PDGFB-203ENST00000440375 DNAH11Q96DT5 4516 aa8.37□□□□□ -1.07
PDGFB-203ENST00000440375 TRBV19A0A075B6N1 114 aa8.36□□□□□ -1.07
PDGFB-203ENST00000440375 NUDT3O95989 172 aa8.36□□□□□ -1.07
PDGFB-203ENST00000440375 ATP5G1P05496 136 aa8.36□□□□□ -1.07
PDGFB-203ENST00000440375 ATP5G3P48201 142 aa8.36□□□□□ -1.07
PDGFB-203ENST00000440375 NHLH2Q02577 135 aa8.36□□□□□ -1.07
PDGFB-203ENST00000440375 ERCC8Q13216 396 aa8.36□□□□□ -1.07
PDGFB-203ENST00000440375 LRRC37A5PQ49AS3 106 aa8.36□□□□□ -1.07
PDGFB-203ENST00000440375 CHAC2Q8WUX2 184 aa8.36□□□□□ -1.07
PDGFB-203ENST00000440375 NPCDR1Q9BY65 106 aa8.36□□□□□ -1.07
PDGFB-203ENST00000440375 TIMM8BQ9Y5J9 83 aaPredicted RBP8.36□□□□□ -1.07
PDGFB-203ENST00000440375 PCLOQ9Y6V0 5065 aa8.35□□□□□ -1.07
PDGFB-203ENST00000440375 TRAV12-3A0A0B4J271 114 aa8.35□□□□□ -1.07
PDGFB-203ENST00000440375 CBY3A6NI87 242 aa8.35□□□□□ -1.07
PDGFB-203ENST00000440375 H0YIZ8 118 aa8.35□□□□□ -1.07
PDGFB-203ENST00000440375 ZNF253O75346 499 aa8.35□□□□□ -1.07
PDGFB-203ENST00000440375 H2BFSP57053 126 aa8.35□□□□□ -1.07
PDGFB-203ENST00000440375 CLINT1Q14677 625 aa8.35□□□□□ -1.07
PDGFB-203ENST00000440375 GUK1Q16774 197 aa8.35□□□□□ -1.07
PDGFB-203ENST00000440375 ZNF493Q6ZR52 646 aa8.35□□□□□ -1.07
PDGFB-203ENST00000440375 EXOC3-AS1Q8N2X6 119 aa8.35□□□□□ -1.07
PDGFB-203ENST00000440375 OR5C1Q8NGR4 320 aa8.35□□□□□ -1.07
PDGFB-203ENST00000440375 RNF141Q8WVD5 230 aa8.35□□□□□ -1.07
PDGFB-203ENST00000440375 C20orf144Q9BQM9 153 aa8.35□□□□□ -1.07
PDGFB-203ENST00000440375 SLC25A2Q9BXI2 301 aa8.35□□□□□ -1.07
PDGFB-203ENST00000440375 TMEM14CQ9P0S9 112 aa8.35□□□□□ -1.07
PDGFB-203ENST00000440375 LEPP41159 167 aa8.34□□□□□ -1.07
PDGFB-203ENST00000440375 ATP6V1FQ16864 119 aa8.34□□□□□ -1.07
PDGFB-203ENST00000440375 MIR17HGQ75NE6 70 aa8.34□□□□□ -1.07
PDGFB-203ENST00000440375 LINC00612Q8N6U2 182 aa8.34□□□□□ -1.07
PDGFB-203ENST00000440375 ZNRF2Q8NHG8 242 aa8.34□□□□□ -1.07
PDGFB-203ENST00000440375 BLNKQ8WV28 456 aa8.34□□□□□ -1.07
PDGFB-203ENST00000440375 FAM167A-AS1Q96KT0 104 aa8.34□□□□□ -1.07
PDGFB-203ENST00000440375 ODF3Q96PU9 254 aa8.34□□□□□ -1.07
PDGFB-203ENST00000440375 ATG101Q9BSB4 218 aa8.34□□□□□ -1.07
PDGFB-203ENST00000440375 NMES1Q9C002 83 aa8.34□□□□□ -1.07
PDGFB-203ENST00000440375 IGKV2-40A0A087WW87 121 aaPredicted RBP8.33□□□□□ -1.08
PDGFB-203ENST00000440375 GAGE12BA1L429 117 aa8.33□□□□□ -1.08
PDGFB-203ENST00000440375 MPDU1O75352 247 aa8.33□□□□□ -1.08
PDGFB-203ENST00000440375 GAGE7O76087 117 aa8.33□□□□□ -1.08
PDGFB-203ENST00000440375 IGKV2D-40P01614 121 aaPredicted RBP8.33□□□□□ -1.08
PDGFB-203ENST00000440375 GAGE12FP0CL80 117 aa8.33□□□□□ -1.08
PDGFB-203ENST00000440375 GAGE12GP0CL81 117 aa8.33□□□□□ -1.08
PDGFB-203ENST00000440375 GAGE12IP0CL82 117 aa8.33□□□□□ -1.08
PDGFB-203ENST00000440375 HIST1H1EP10412 219 aaKnown RBP8.33□□□□□ -1.08
PDGFB-203ENST00000440375 HOXA5P20719 270 aa8.33□□□□□ -1.08
PDGFB-203ENST00000440375 BTN1A1Q13410 526 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms