RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 CCL18P55774 89 aa12.62□□□□□ -0.39
GTF3A-204ENST00000438571 BPIFA4PQ86YQ2 179 aa12.62□□□□□ -0.39
GTF3A-204ENST00000438571 LSM5Q9Y4Y9 91 aaKnown RBP12.62□□□□□ -0.39
GTF3A-204ENST00000438571 TRAV26-1A0A087WT03 109 aa12.61□□□□□ -0.39
GTF3A-204ENST00000438571 GAGE12BA1L429 117 aa12.61□□□□□ -0.39
GTF3A-204ENST00000438571 GAGE7O76087 117 aa12.61□□□□□ -0.39
GTF3A-204ENST00000438571 GAGE12FP0CL80 117 aa12.61□□□□□ -0.39
GTF3A-204ENST00000438571 GAGE12GP0CL81 117 aa12.61□□□□□ -0.39
GTF3A-204ENST00000438571 GAGE12IP0CL82 117 aa12.61□□□□□ -0.39
GTF3A-204ENST00000438571 OR5I1Q13606 314 aa12.61□□□□□ -0.39
GTF3A-204ENST00000438571 CLINT1Q14677 625 aa12.61□□□□□ -0.39
GTF3A-204ENST00000438571 PXDC1Q5TGL8 231 aa12.61□□□□□ -0.39
GTF3A-204ENST00000438571 MIC13Q5XKP0 118 aa12.61□□□□□ -0.39
GTF3A-204ENST00000438571 ZNF493Q6ZR52 646 aa12.61□□□□□ -0.39
GTF3A-204ENST00000438571 SAT2Q96F10 170 aaPredicted RBP12.61□□□□□ -0.39
GTF3A-204ENST00000438571 C20orf85Q9H1P6 137 aa12.61□□□□□ -0.39
GTF3A-204ENST00000438571 C11orf1Q9H5F2 150 aa12.61□□□□□ -0.39
GTF3A-204ENST00000438571 CT45A10P0DMU9 189 aa12.6□□□□□ -0.39
GTF3A-204ENST00000438571 C10orf113Q5VZT2 155 aa12.6□□□□□ -0.39
GTF3A-204ENST00000438571 S100A7AQ86SG5 101 aa12.6□□□□□ -0.39
GTF3A-204ENST00000438571 C20orf144Q9BQM9 153 aa12.6□□□□□ -0.39
GTF3A-204ENST00000438571 GGACTQ9BVM4 153 aa12.6□□□□□ -0.39
GTF3A-204ENST00000438571 FAM24AA6NFZ4 105 aa12.59□□□□□ -0.39
GTF3A-204ENST00000438571 PLA2G10O15496 165 aa12.59□□□□□ -0.39
GTF3A-204ENST00000438571 CST7O76096 145 aa12.59□□□□□ -0.39
GTF3A-204ENST00000438571 NRARPQ7Z6K4 114 aa12.59□□□□□ -0.39
GTF3A-204ENST00000438571 OR10J6PQ8NGY7 276 aa12.59□□□□□ -0.39
GTF3A-204ENST00000438571 GNPNAT1Q96EK6 184 aaPredicted RBP12.59□□□□□ -0.39
GTF3A-204ENST00000438571 ZNF586Q9NXT0 402 aa12.59□□□□□ -0.39
GTF3A-204ENST00000438571 TRAV12-3A0A0B4J271 114 aa12.58□□□□□ -0.4
GTF3A-204ENST00000438571 CAMLGP49069 296 aa12.58□□□□□ -0.4
GTF3A-204ENST00000438571 SEC22CQ9BRL7 303 aa12.58□□□□□ -0.4
GTF3A-204ENST00000438571 TMPRSS5Q9H3S3 457 aa12.58□□□□□ -0.4
GTF3A-204ENST00000438571 Q9H8V8 135 aa12.58□□□□□ -0.4
GTF3A-204ENST00000438571 CENPXA8MT69 81 aa12.57□□□□□ -0.4
GTF3A-204ENST00000438571 FAM25EA8MYX2 175 aa12.57□□□□□ -0.4
GTF3A-204ENST00000438571 NPIPB6E9PJ23 425 aa12.57□□□□□ -0.4
GTF3A-204ENST00000438571 L7N2F9 121 aa12.57□□□□□ -0.4
GTF3A-204ENST00000438571 M0R3E3 92 aa12.57□□□□□ -0.4
GTF3A-204ENST00000438571 M6PRP20645 277 aa12.57□□□□□ -0.4
GTF3A-204ENST00000438571 BCAP31P51572 246 aa12.57□□□□□ -0.4
GTF3A-204ENST00000438571 VAMP2P63027 116 aa12.57□□□□□ -0.4
GTF3A-204ENST00000438571 ESRGQ1W209 222 aa12.57□□□□□ -0.4
GTF3A-204ENST00000438571 Q6ZTI0 123 aa12.57□□□□□ -0.4
GTF3A-204ENST00000438571 RXFP4Q8TDU9 374 aa12.57□□□□□ -0.4
GTF3A-204ENST00000438571 ZNF431Q8TF32 576 aaPredicted RBP12.57□□□□□ -0.4
GTF3A-204ENST00000438571 RNF24Q9Y225 148 aa12.57□□□□□ -0.4
GTF3A-204ENST00000438571 WDR83OSQ9Y284 106 aa12.57□□□□□ -0.4
GTF3A-204ENST00000438571 PXMP4Q9Y6I8 212 aa12.57□□□□□ -0.4
GTF3A-204ENST00000438571 TRAV6A0A075B6T7 132 aa12.56□□□□□ -0.4
GTF3A-204ENST00000438571 UBE2L5PA0A1B0GUS4 154 aa12.56□□□□□ -0.4
GTF3A-204ENST00000438571 SNURFLB1AK76 121 aa12.56□□□□□ -0.4
GTF3A-204ENST00000438571 RLN2P04090 185 aa12.56□□□□□ -0.4
GTF3A-204ENST00000438571 CAV2P51636 162 aa12.56□□□□□ -0.4
GTF3A-204ENST00000438571 ERCC8Q13216 396 aa12.56□□□□□ -0.4
GTF3A-204ENST00000438571 SPATA12Q7Z6I5 190 aa12.56□□□□□ -0.4
GTF3A-204ENST00000438571 CCDC28AQ8IWP9 274 aa12.56□□□□□ -0.4
GTF3A-204ENST00000438571 MAPKAPK5-AS1Q8N8E1 139 aa12.56□□□□□ -0.4
GTF3A-204ENST00000438571 DNAJC4Q9NNZ3 241 aa12.56□□□□□ -0.4
GTF3A-204ENST00000438571 IGSF23A1L1A6 192 aa12.55□□□□□ -0.4
GTF3A-204ENST00000438571 CDK2AP2O75956 126 aa12.55□□□□□ -0.4
GTF3A-204ENST00000438571 LYRM1O43325 122 aa12.54□□□□□ -0.4
GTF3A-204ENST00000438571 LEPP41159 167 aa12.54□□□□□ -0.4
GTF3A-204ENST00000438571 KRTAP10-2P60368 255 aa12.54□□□□□ -0.4
GTF3A-204ENST00000438571 BTN1A1Q13410 526 aa12.54□□□□□ -0.4
GTF3A-204ENST00000438571 ZNF846Q147U1 533 aa12.54□□□□□ -0.4
GTF3A-204ENST00000438571 VWC2Q2TAL6 325 aa12.54□□□□□ -0.4
GTF3A-204ENST00000438571 C11orf72Q8NBR9 251 aa12.54□□□□□ -0.4
GTF3A-204ENST00000438571 ODF3Q96PU9 254 aa12.54□□□□□ -0.4
GTF3A-204ENST00000438571 Q9H3A6 140 aa12.54□□□□□ -0.4
GTF3A-204ENST00000438571 UQCC1Q9NVA1 299 aa12.54□□□□□ -0.4
GTF3A-204ENST00000438571 C5orf51A6NDU8 294 aa12.53□□□□□ -0.4
GTF3A-204ENST00000438571 NDUFB4O95168 129 aa12.53□□□□□ -0.4
GTF3A-204ENST00000438571 TCRBP04435 133 aa12.53□□□□□ -0.4
GTF3A-204ENST00000438571 PYYP10082 97 aa12.53□□□□□ -0.4
GTF3A-204ENST00000438571 BAXQ07812 192 aa12.53□□□□□ -0.4
GTF3A-204ENST00000438571 Q6ZRG5 221 aa12.53□□□□□ -0.4
GTF3A-204ENST00000438571 OR1L4Q8NGR5 311 aa12.53□□□□□ -0.4
GTF3A-204ENST00000438571 ZNF503Q96F45 646 aa12.53□□□□□ -0.4
GTF3A-204ENST00000438571 VSIG2Q96IQ7 327 aa12.53□□□□□ -0.4
GTF3A-204ENST00000438571 PYGO2Q9BRQ0 406 aa12.53□□□□□ -0.4
GTF3A-204ENST00000438571 UPK3BQ9BT76 320 aa12.53□□□□□ -0.4
GTF3A-204ENST00000438571 GSN-AS1Q9NRJ2 163 aa12.53□□□□□ -0.4
GTF3A-204ENST00000438571 SLC39A9Q9NUM3 307 aa12.53□□□□□ -0.4
GTF3A-204ENST00000438571 PTTG2Q9NZH5 202 aa12.53□□□□□ -0.4
GTF3A-204ENST00000438571 TRBV19A0A075B6N1 114 aa12.52□□□□□ -0.41
GTF3A-204ENST00000438571 A0A096LPF7 62 aa12.52□□□□□ -0.41
GTF3A-204ENST00000438571 C7orf71A4D174 169 aa12.52□□□□□ -0.41
GTF3A-204ENST00000438571 S100A10P60903 97 aa12.52□□□□□ -0.41
GTF3A-204ENST00000438571 CD300CQ08708 224 aa12.52□□□□□ -0.41
GTF3A-204ENST00000438571 GCSAMLQ5JQS6 135 aa12.52□□□□□ -0.41
GTF3A-204ENST00000438571 Q6ZQT7 251 aa12.52□□□□□ -0.41
GTF3A-204ENST00000438571 NUDT15Q9NV35 164 aa12.52□□□□□ -0.41
GTF3A-204ENST00000438571 MRPS16Q9Y3D3 137 aaKnown RBP12.52□□□□□ -0.41
GTF3A-204ENST00000438571 RPL29P47914 159 aaKnown RBP12.51□□□□□ -0.41
GTF3A-204ENST00000438571 DAZ2Q13117 558 aaKnown RBP12.51□□□□□ -0.41
GTF3A-204ENST00000438571 RAB32Q13637 225 aa12.51□□□□□ -0.41
GTF3A-204ENST00000438571 GUK1Q16774 197 aa12.51□□□□□ -0.41
GTF3A-204ENST00000438571 TTC32Q5I0X7 151 aa12.51□□□□□ -0.41
GTF3A-204ENST00000438571 PRR9Q5T870 116 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms