RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 TMEM88Q6PEY1 159 aa12.61□□□□□ -0.39
CPNE1-213ENST00000434795 STX12Q86Y82 276 aa12.61□□□□□ -0.39
CPNE1-213ENST00000434795 PFDN5Q99471 154 aa12.61□□□□□ -0.39
CPNE1-213ENST00000434795 DEFB130BP0DP73 79 aa12.6□□□□□ -0.39
CPNE1-213ENST00000434795 DEFB130AP0DP74 79 aa12.6□□□□□ -0.39
CPNE1-213ENST00000434795 HTN1P15515 57 aa12.6□□□□□ -0.39
CPNE1-213ENST00000434795 BAXQ07812 192 aa12.6□□□□□ -0.39
CPNE1-213ENST00000434795 RNF212Q495C1 297 aa12.6□□□□□ -0.39
CPNE1-213ENST00000434795 OR10J6PQ8NGY7 276 aa12.6□□□□□ -0.39
CPNE1-213ENST00000434795 GPN1Q9HCN4 374 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-213ENST00000434795 UBE2L5PA0A1B0GUS4 154 aa12.59□□□□□ -0.39
CPNE1-213ENST00000434795 M0R2N4 97 aa12.59□□□□□ -0.39
CPNE1-213ENST00000434795 CT45A10P0DMU9 189 aa12.59□□□□□ -0.39
CPNE1-213ENST00000434795 FGF7P21781 194 aa12.59□□□□□ -0.39
CPNE1-213ENST00000434795 LGALS9BQ3B8N2 356 aa12.59□□□□□ -0.39
CPNE1-213ENST00000434795 PARD6GQ9BYG4 376 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-213ENST00000434795 CBY3A6NI87 242 aa12.58□□□□□ -0.4
CPNE1-213ENST00000434795 H0YIZ8 118 aa12.58□□□□□ -0.4
CPNE1-213ENST00000434795 H7BYZ3 331 aa12.58□□□□□ -0.4
CPNE1-213ENST00000434795 ZNF253O75346 499 aa12.58□□□□□ -0.4
CPNE1-213ENST00000434795 MPDU1O75352 247 aa12.58□□□□□ -0.4
CPNE1-213ENST00000434795 ZNF493Q6ZR52 646 aa12.58□□□□□ -0.4
CPNE1-213ENST00000434795 LINC00336Q6ZUF6 198 aa12.58□□□□□ -0.4
CPNE1-213ENST00000434795 ENKURQ8TC29 256 aa12.58□□□□□ -0.4
CPNE1-213ENST00000434795 C20orf144Q9BQM9 153 aa12.58□□□□□ -0.4
CPNE1-213ENST00000434795 NMES1Q9C002 83 aa12.58□□□□□ -0.4
CPNE1-213ENST00000434795 TMEM14CQ9P0S9 112 aa12.58□□□□□ -0.4
CPNE1-213ENST00000434795 TIMM8BQ9Y5J9 83 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-213ENST00000434795 TRBV19A0A075B6N1 114 aa12.57□□□□□ -0.4
CPNE1-213ENST00000434795 INMT-MINDY4F8WBC2 141 aa12.57□□□□□ -0.4
CPNE1-213ENST00000434795 RTL8CO15255 209 aa12.57□□□□□ -0.4
CPNE1-213ENST00000434795 NDUFB4O95168 129 aa12.57□□□□□ -0.4
CPNE1-213ENST00000434795 RLN2P04090 185 aa12.57□□□□□ -0.4
CPNE1-213ENST00000434795 HIST1H1EP10412 219 aaKnown RBP12.57□□□□□ -0.4
CPNE1-213ENST00000434795 Q6ZR54 194 aa12.57□□□□□ -0.4
CPNE1-213ENST00000434795 RNASE8Q8TDE3 154 aaKnown RBP12.57□□□□□ -0.4
CPNE1-213ENST00000434795 C16orf74Q96GX8 76 aa12.57□□□□□ -0.4
CPNE1-213ENST00000434795 OR5AC2Q9NZP5 309 aa12.57□□□□□ -0.4
CPNE1-213ENST00000434795 E5RGE8 158 aa12.56□□□□□ -0.4
CPNE1-213ENST00000434795 NPIPB6E9PJ23 425 aa12.56□□□□□ -0.4
CPNE1-213ENST00000434795 GCSAMLQ5JQS6 135 aa12.56□□□□□ -0.4
CPNE1-213ENST00000434795 GFI1BQ5VTD9 330 aa12.56□□□□□ -0.4
CPNE1-213ENST00000434795 OR5C1Q8NGR4 320 aa12.56□□□□□ -0.4
CPNE1-213ENST00000434795 MARVELD1Q9BSK0 173 aa12.56□□□□□ -0.4
CPNE1-213ENST00000434795 NPCDR1Q9BY65 106 aa12.56□□□□□ -0.4
CPNE1-213ENST00000434795 SLC25A31Q9H0C2 315 aa12.56□□□□□ -0.4
CPNE1-213ENST00000434795 NOP10Q9NPE3 64 aaKnown RBP12.56□□□□□ -0.4
CPNE1-213ENST00000434795 F5H768 121 aa12.55□□□□□ -0.4
CPNE1-213ENST00000434795 PRAF2O60831 178 aa12.55□□□□□ -0.4
CPNE1-213ENST00000434795 CYCSP99999 105 aaKnown RBP12.55□□□□□ -0.4
CPNE1-213ENST00000434795 UBE2DNLQ8IWF7 75 aa12.55□□□□□ -0.4
CPNE1-213ENST00000434795 C15orf53Q8NAA6 179 aa12.55□□□□□ -0.4
CPNE1-213ENST00000434795 TMEM263Q8WUH6 116 aaKnown RBP12.55□□□□□ -0.4
CPNE1-213ENST00000434795 MRPL53Q96EL3 112 aaKnown RBP12.55□□□□□ -0.4
CPNE1-213ENST00000434795 ODF3Q96PU9 254 aa12.55□□□□□ -0.4
CPNE1-213ENST00000434795 PTTG2Q9NZH5 202 aa12.55□□□□□ -0.4
CPNE1-213ENST00000434795 A0A1B0GVY2 172 aa12.54□□□□□ -0.4
CPNE1-213ENST00000434795 M0R3E3 92 aa12.54□□□□□ -0.4
CPNE1-213ENST00000434795 ATP5G1P05496 136 aa12.54□□□□□ -0.4
CPNE1-213ENST00000434795 PYYP10082 97 aa12.54□□□□□ -0.4
CPNE1-213ENST00000434795 ATP5G3P48201 142 aa12.54□□□□□ -0.4
CPNE1-213ENST00000434795 H2BFSP57053 126 aa12.54□□□□□ -0.4
CPNE1-213ENST00000434795 THAP6Q8TBB0 222 aa12.54□□□□□ -0.4
CPNE1-213ENST00000434795 FAM167A-AS1Q96KT0 104 aa12.54□□□□□ -0.4
CPNE1-213ENST00000434795 IGLV2-18A0A075B6J9 118 aa12.53□□□□□ -0.4
CPNE1-213ENST00000434795 LEPP41159 167 aa12.53□□□□□ -0.4
CPNE1-213ENST00000434795 ERCC8Q13216 396 aa12.53□□□□□ -0.4
CPNE1-213ENST00000434795 PDE6HQ13956 83 aa12.53□□□□□ -0.4
CPNE1-213ENST00000434795 LRRC37A5PQ49AS3 106 aa12.53□□□□□ -0.4
CPNE1-213ENST00000434795 LINC00612Q8N6U2 182 aa12.53□□□□□ -0.4
CPNE1-213ENST00000434795 FAM19A4Q96LR4 140 aa12.53□□□□□ -0.4
CPNE1-213ENST00000434795 LINC00477Q96M19 166 aa12.53□□□□□ -0.4
CPNE1-213ENST00000434795 SLC25A2Q9BXI2 301 aa12.53□□□□□ -0.4
CPNE1-213ENST00000434795 AGPAT4-IT1Q9H0P7 198 aa12.53□□□□□ -0.4
CPNE1-213ENST00000434795 PRELID1Q9Y255 219 aa12.53□□□□□ -0.4
CPNE1-213ENST00000434795 TIMM9Q9Y5J7 89 aa12.53□□□□□ -0.4
CPNE1-213ENST00000434795 HERC2O95714 4834 aa12.53□□□□□ -0.4
CPNE1-213ENST00000434795 PKD1P98161 4303 aa12.52□□□□□ -0.4
CPNE1-213ENST00000434795 TRAV12-3A0A0B4J271 114 aa12.52□□□□□ -0.41
CPNE1-213ENST00000434795 J3KRW8 73 aa12.52□□□□□ -0.41
CPNE1-213ENST00000434795 MIR17HGQ75NE6 70 aa12.52□□□□□ -0.41
CPNE1-213ENST00000434795 CCDC28AQ8IWP9 274 aa12.52□□□□□ -0.41
CPNE1-213ENST00000434795 EXOC3-AS1Q8N2X6 119 aa12.52□□□□□ -0.41
CPNE1-213ENST00000434795 WDR61Q9GZS3 305 aaKnown RBP12.52□□□□□ -0.41
CPNE1-213ENST00000434795 PRSS29PA6NIE9 313 aa12.51□□□□□ -0.41
CPNE1-213ENST00000434795 ZNF324O75467 553 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-213ENST00000434795 FAM3BP58499 235 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-213ENST00000434795 CLINT1Q14677 625 aa12.51□□□□□ -0.41
CPNE1-213ENST00000434795 BLNKQ8WV28 456 aa12.51□□□□□ -0.41
CPNE1-213ENST00000434795 PPP1R1CQ8WVI7 109 aa12.51□□□□□ -0.41
CPNE1-213ENST00000434795 SLC25A5P05141 298 aaKnown RBP12.5□□□□□ -0.41
CPNE1-213ENST00000434795 NBEAP1P0C6P0 100 aa12.5□□□□□ -0.41
CPNE1-213ENST00000434795 C9orf47Q6ZRZ4 202 aa12.5□□□□□ -0.41
CPNE1-213ENST00000434795 OR51M1Q9H341 326 aa12.5□□□□□ -0.41
CPNE1-213ENST00000434795 KLLNB2CW77 178 aa12.49□□□□□ -0.41
CPNE1-213ENST00000434795 NUDT3O95989 172 aa12.49□□□□□ -0.41
CPNE1-213ENST00000434795 CD300CQ08708 224 aa12.49□□□□□ -0.41
CPNE1-213ENST00000434795 ICAM4Q14773 271 aa12.49□□□□□ -0.41
CPNE1-213ENST00000434795 PYGO2Q9BRQ0 406 aa12.49□□□□□ -0.41
CPNE1-213ENST00000434795 PKHD1P08F94 4074 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms