RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 ZNF846Q147U1 533 aa11.93□□□□□ -0.5
CPSF4-203ENST00000430038 ZNF575Q86XF7 245 aa11.93□□□□□ -0.5
CPSF4-203ENST00000430038 TMEM252Q8N6L7 170 aa11.93□□□□□ -0.5
CPSF4-203ENST00000430038 C15orf53Q8NAA6 179 aa11.93□□□□□ -0.5
CPSF4-203ENST00000430038 RNF141Q8WVD5 230 aa11.93□□□□□ -0.5
CPSF4-203ENST00000430038 LINC00588Q9Y4M8 146 aa11.93□□□□□ -0.5
CPSF4-203ENST00000430038 HSPG2P98160 4391 aa11.92□□□□□ -0.5
CPSF4-203ENST00000430038 LRP1BQ9NZR2 4599 aa11.92□□□□□ -0.5
CPSF4-203ENST00000430038 J3KRW8 73 aa11.92□□□□□ -0.5
CPSF4-203ENST00000430038 NDUFB4O95168 129 aa11.92□□□□□ -0.5
CPSF4-203ENST00000430038 NUDT3O95989 172 aa11.92□□□□□ -0.5
CPSF4-203ENST00000430038 ATP5G1P05496 136 aa11.92□□□□□ -0.5
CPSF4-203ENST00000430038 ATP5G3P48201 142 aa11.92□□□□□ -0.5
CPSF4-203ENST00000430038 GCSAMLQ5JQS6 135 aa11.92□□□□□ -0.5
CPSF4-203ENST00000430038 LINC00612Q8N6U2 182 aa11.92□□□□□ -0.5
CPSF4-203ENST00000430038 C16orf74Q96GX8 76 aa11.92□□□□□ -0.5
CPSF4-203ENST00000430038 LYRM2Q9NU23 88 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-203ENST00000430038 UQCC1Q9NVA1 299 aa11.92□□□□□ -0.5
CPSF4-203ENST00000430038 TIMM8BQ9Y5J9 83 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-203ENST00000430038 M0R3E3 92 aa11.91□□□□□ -0.5
CPSF4-203ENST00000430038 HOXA5P20719 270 aa11.91□□□□□ -0.5
CPSF4-203ENST00000430038 RPL29P47914 159 aaKnown RBP11.91□□□□□ -0.5
CPSF4-203ENST00000430038 SULT1A1P50225 295 aa11.91□□□□□ -0.5
CPSF4-203ENST00000430038 ERCC8Q13216 396 aa11.91□□□□□ -0.5
CPSF4-203ENST00000430038 S100A7AQ86SG5 101 aa11.91□□□□□ -0.5
CPSF4-203ENST00000430038 TMEM263Q8WUH6 116 aaKnown RBP11.91□□□□□ -0.5
CPSF4-203ENST00000430038 SLC39A9Q9NUM3 307 aa11.91□□□□□ -0.5
CPSF4-203ENST00000430038 UBE2L5PA0A1B0GUS4 154 aa11.9□□□□□ -0.5
CPSF4-203ENST00000430038 NPIPB6E9PJ23 425 aa11.9□□□□□ -0.5
CPSF4-203ENST00000430038 H7BYZ3 331 aa11.9□□□□□ -0.5
CPSF4-203ENST00000430038 SIX6O95475 246 aa11.9□□□□□ -0.5
CPSF4-203ENST00000430038 MED14OSP0DP75 135 aa11.9□□□□□ -0.5
CPSF4-203ENST00000430038 PYYP10082 97 aa11.9□□□□□ -0.5
CPSF4-203ENST00000430038 S100A10P60903 97 aa11.9□□□□□ -0.5
CPSF4-203ENST00000430038 NHLH2Q02577 135 aa11.9□□□□□ -0.5
CPSF4-203ENST00000430038 TNP2Q05952 138 aa11.9□□□□□ -0.5
CPSF4-203ENST00000430038 C1orf134Q5TEV5 83 aa11.9□□□□□ -0.5
CPSF4-203ENST00000430038 OR10J6PQ8NGY7 276 aa11.9□□□□□ -0.5
CPSF4-203ENST00000430038 KRTAP4-5Q9BYR2 181 aa11.9□□□□□ -0.5
CPSF4-203ENST00000430038 PXMP4Q9Y6I8 212 aa11.9□□□□□ -0.5
CPSF4-203ENST00000430038 TRAV12-3A0A0B4J271 114 aa11.89□□□□□ -0.51
CPSF4-203ENST00000430038 Q6ZQT7 251 aa11.89□□□□□ -0.51
CPSF4-203ENST00000430038 ZNF493Q6ZR52 646 aa11.89□□□□□ -0.51
CPSF4-203ENST00000430038 Q6ZRG5 221 aa11.89□□□□□ -0.51
CPSF4-203ENST00000430038 CHAC2Q8WUX2 184 aa11.89□□□□□ -0.51
CPSF4-203ENST00000430038 CCDC32Q9BV29 185 aa11.89□□□□□ -0.51
CPSF4-203ENST00000430038 TRBV19A0A075B6N1 114 aa11.88□□□□□ -0.51
CPSF4-203ENST00000430038 NBDYA0A0U1RRE5 68 aa11.88□□□□□ -0.51
CPSF4-203ENST00000430038 GAGE12BA1L429 117 aa11.88□□□□□ -0.51
CPSF4-203ENST00000430038 GAGE7O76087 117 aa11.88□□□□□ -0.51
CPSF4-203ENST00000430038 GAGE12FP0CL80 117 aa11.88□□□□□ -0.51
CPSF4-203ENST00000430038 GAGE12GP0CL81 117 aa11.88□□□□□ -0.51
CPSF4-203ENST00000430038 GAGE12IP0CL82 117 aa11.88□□□□□ -0.51
CPSF4-203ENST00000430038 S100A11P31949 105 aa11.88□□□□□ -0.51
CPSF4-203ENST00000430038 IFITM3Q01628 133 aa11.88□□□□□ -0.51
CPSF4-203ENST00000430038 BAXQ07812 192 aa11.88□□□□□ -0.51
CPSF4-203ENST00000430038 FAM19A4Q96LR4 140 aa11.88□□□□□ -0.51
CPSF4-203ENST00000430038 C20orf144Q9BQM9 153 aa11.88□□□□□ -0.51
CPSF4-203ENST00000430038 ATG101Q9BSB4 218 aa11.88□□□□□ -0.51
CPSF4-203ENST00000430038 KRTAP1-5Q9BYS1 174 aa11.88□□□□□ -0.51
CPSF4-203ENST00000430038 NDUFA13Q9P0J0 144 aa11.88□□□□□ -0.51
CPSF4-203ENST00000430038 RNF24Q9Y225 148 aa11.88□□□□□ -0.51
CPSF4-203ENST00000430038 FAM240BA0A1B0GVZ2 78 aa11.87□□□□□ -0.51
CPSF4-203ENST00000430038 H0YIZ8 118 aa11.87□□□□□ -0.51
CPSF4-203ENST00000430038 FGF7P21781 194 aa11.87□□□□□ -0.51
CPSF4-203ENST00000430038 FAM3BP58499 235 aaPredicted RBP11.87□□□□□ -0.51
CPSF4-203ENST00000430038 CD300CQ08708 224 aa11.87□□□□□ -0.51
CPSF4-203ENST00000430038 RAB31Q13636 194 aa11.87□□□□□ -0.51
CPSF4-203ENST00000430038 EXOC3-AS1Q8N2X6 119 aa11.87□□□□□ -0.51
CPSF4-203ENST00000430038 OR1L4Q8NGR5 311 aa11.87□□□□□ -0.51
CPSF4-203ENST00000430038 FAM167A-AS1Q96KT0 104 aa11.87□□□□□ -0.51
CPSF4-203ENST00000430038 AGPAT4-IT1Q9H0P7 198 aa11.87□□□□□ -0.51
CPSF4-203ENST00000430038 TRAV26-1A0A087WT03 109 aa11.86□□□□□ -0.51
CPSF4-203ENST00000430038 A0A0J9YY99 117 aa11.86□□□□□ -0.51
CPSF4-203ENST00000430038 ZNF324O75467 553 aaPredicted RBP11.86□□□□□ -0.51
CPSF4-203ENST00000430038 OR5I1Q13606 314 aa11.86□□□□□ -0.51
CPSF4-203ENST00000430038 GUK1Q16774 197 aa11.86□□□□□ -0.51
CPSF4-203ENST00000430038 Q6ZTI0 123 aa11.86□□□□□ -0.51
CPSF4-203ENST00000430038 SSX7Q7RTT5 188 aa11.86□□□□□ -0.51
CPSF4-203ENST00000430038 SLC25A2Q9BXI2 301 aa11.86□□□□□ -0.51
CPSF4-203ENST00000430038 OR5AC2Q9NZP5 309 aa11.86□□□□□ -0.51
CPSF4-203ENST00000430038 TMEM14CQ9P0S9 112 aa11.86□□□□□ -0.51
CPSF4-203ENST00000430038 ZNF253O75346 499 aa11.85□□□□□ -0.51
CPSF4-203ENST00000430038 PVALBP20472 110 aaPredicted RBP11.85□□□□□ -0.51
CPSF4-203ENST00000430038 ASAH1Q13510 395 aa11.85□□□□□ -0.51
CPSF4-203ENST00000430038 PRR9Q5T870 116 aa11.85□□□□□ -0.51
CPSF4-203ENST00000430038 MIR17HGQ75NE6 70 aa11.85□□□□□ -0.51
CPSF4-203ENST00000430038 C11orf72Q8NBR9 251 aa11.85□□□□□ -0.51
CPSF4-203ENST00000430038 THAP6Q8TBB0 222 aa11.85□□□□□ -0.51
CPSF4-203ENST00000430038 ODF3Q96PU9 254 aa11.85□□□□□ -0.51
CPSF4-203ENST00000430038 PFDN5Q99471 154 aa11.85□□□□□ -0.51
CPSF4-203ENST00000430038 NPCDR1Q9BY65 106 aa11.85□□□□□ -0.51
CPSF4-203ENST00000430038 GPN1Q9HCN4 374 aaPredicted RBP11.85□□□□□ -0.51
CPSF4-203ENST00000430038 DNAH5Q8TE73 4624 aa11.85□□□□□ -0.51
CPSF4-203ENST00000430038 KLLNB2CW77 178 aa11.84□□□□□ -0.51
CPSF4-203ENST00000430038 HIST1H1EP10412 219 aaKnown RBP11.84□□□□□ -0.51
CPSF4-203ENST00000430038 LEPP41159 167 aa11.84□□□□□ -0.51
CPSF4-203ENST00000430038 BTN1A1Q13410 526 aa11.84□□□□□ -0.51
CPSF4-203ENST00000430038 ESRGQ1W209 222 aa11.84□□□□□ -0.51
CPSF4-203ENST00000430038 BLNKQ8WV28 456 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms