RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 OR10J6PQ8NGY7 276 aa11.73□□□□□ -0.53
LINC00404-201ENST00000418660 THAP6Q8TBB0 222 aa11.73□□□□□ -0.53
LINC00404-201ENST00000418660 TMEM14CQ9P0S9 112 aa11.73□□□□□ -0.53
LINC00404-201ENST00000418660 PRM2P04554 102 aa11.72□□□□□ -0.53
LINC00404-201ENST00000418660 CLINT1Q14677 625 aa11.72□□□□□ -0.53
LINC00404-201ENST00000418660 FAM210BQ96KR6 192 aa11.72□□□□□ -0.53
LINC00404-201ENST00000418660 LINC01587Q99440 93 aa11.72□□□□□ -0.53
LINC00404-201ENST00000418660 NDUFAF3Q9BU61 184 aa11.72□□□□□ -0.53
LINC00404-201ENST00000418660 WDR61Q9GZS3 305 aaKnown RBP11.72□□□□□ -0.53
LINC00404-201ENST00000418660 TRBV19A0A075B6N1 114 aa11.71□□□□□ -0.53
LINC00404-201ENST00000418660 MPC2O95563 127 aa11.71□□□□□ -0.53
LINC00404-201ENST00000418660 PET100P0DJ07 73 aa11.71□□□□□ -0.53
LINC00404-201ENST00000418660 HIST1H1EP10412 219 aaKnown RBP11.71□□□□□ -0.53
LINC00404-201ENST00000418660 TAS2R60P59551 318 aa11.71□□□□□ -0.53
LINC00404-201ENST00000418660 DAD1P61803 113 aa11.71□□□□□ -0.53
LINC00404-201ENST00000418660 GCSAMLQ5JQS6 135 aa11.71□□□□□ -0.53
LINC00404-201ENST00000418660 KCNIP2Q9NS61 270 aa11.71□□□□□ -0.53
LINC00404-201ENST00000418660 LYRM9A8MSI8 78 aa11.7□□□□□ -0.54
LINC00404-201ENST00000418660 AZU1P20160 251 aa11.7□□□□□ -0.54
LINC00404-201ENST00000418660 MRPL53Q96EL3 112 aaKnown RBP11.7□□□□□ -0.54
LINC00404-201ENST00000418660 C20orf144Q9BQM9 153 aa11.7□□□□□ -0.54
LINC00404-201ENST00000418660 NPIPB6E9PJ23 425 aa11.69□□□□□ -0.54
LINC00404-201ENST00000418660 C17orf112F2Z3M2 114 aa11.69□□□□□ -0.54
LINC00404-201ENST00000418660 NDUFB4O95168 129 aa11.69□□□□□ -0.54
LINC00404-201ENST00000418660 PYYP10082 97 aa11.69□□□□□ -0.54
LINC00404-201ENST00000418660 PDE6HQ13956 83 aa11.69□□□□□ -0.54
LINC00404-201ENST00000418660 ATP5SQ99766 215 aa11.69□□□□□ -0.54
LINC00404-201ENST00000418660 SLC25A2Q9BXI2 301 aa11.69□□□□□ -0.54
LINC00404-201ENST00000418660 PRELID1Q9Y255 219 aa11.69□□□□□ -0.54
LINC00404-201ENST00000418660 HSPB11Q9Y547 144 aa11.69□□□□□ -0.54
LINC00404-201ENST00000418660 TIMM9Q9Y5J7 89 aa11.69□□□□□ -0.54
LINC00404-201ENST00000418660 EPPK1P58107 5090 aaKnown RBP11.68□□□□□ -0.54
LINC00404-201ENST00000418660 PLAC8L1A1L4L8 177 aa11.68□□□□□ -0.54
LINC00404-201ENST00000418660 H7BYZ3 331 aa11.68□□□□□ -0.54
LINC00404-201ENST00000418660 P0DMU3 169 aa11.68□□□□□ -0.54
LINC00404-201ENST00000418660 FAM231AP0DMU4 169 aa11.68□□□□□ -0.54
LINC00404-201ENST00000418660 FAM231CP0DMU5 169 aa11.68□□□□□ -0.54
LINC00404-201ENST00000418660 HTN3P15516 51 aa11.68□□□□□ -0.54
LINC00404-201ENST00000418660 MIR17HGQ75NE6 70 aa11.68□□□□□ -0.54
LINC00404-201ENST00000418660 FAM167A-AS1Q96KT0 104 aa11.68□□□□□ -0.54
LINC00404-201ENST00000418660 ODF3Q96PU9 254 aa11.68□□□□□ -0.54
LINC00404-201ENST00000418660 MRPL32Q9BYC8 188 aaKnown RBP11.68□□□□□ -0.54
LINC00404-201ENST00000418660 PARD6GQ9BYG4 376 aaPredicted RBP11.68□□□□□ -0.54
LINC00404-201ENST00000418660 M0R3E3 92 aa11.67□□□□□ -0.54
LINC00404-201ENST00000418660 CT45A10P0DMU9 189 aa11.67□□□□□ -0.54
LINC00404-201ENST00000418660 HTN1P15515 57 aa11.67□□□□□ -0.54
LINC00404-201ENST00000418660 RPL12P30050 165 aaKnown RBP11.67□□□□□ -0.54
LINC00404-201ENST00000418660 LEPP41159 167 aa11.67□□□□□ -0.54
LINC00404-201ENST00000418660 KIR3DS1Q14943 382 aa11.67□□□□□ -0.54
LINC00404-201ENST00000418660 GFI1BQ5VTD9 330 aa11.67□□□□□ -0.54
LINC00404-201ENST00000418660 ZNF493Q6ZR52 646 aa11.67□□□□□ -0.54
LINC00404-201ENST00000418660 BLNKQ8WV28 456 aa11.67□□□□□ -0.54
LINC00404-201ENST00000418660 C16orf74Q96GX8 76 aa11.67□□□□□ -0.54
LINC00404-201ENST00000418660 OR51M1Q9H341 326 aa11.67□□□□□ -0.54
LINC00404-201ENST00000418660 MBD2Q9UBB5 411 aa11.67□□□□□ -0.54
LINC00404-201ENST00000418660 ALG5Q9Y673 324 aa11.67□□□□□ -0.54
LINC00404-201ENST00000418660 NBEAP1P0C6P0 100 aa11.66□□□□□ -0.54
LINC00404-201ENST00000418660 POM121L12Q8N7R1 296 aa11.66□□□□□ -0.54
LINC00404-201ENST00000418660 AAMDCQ9H7C9 122 aa11.66□□□□□ -0.54
LINC00404-201ENST00000418660 FUT9Q9Y231 359 aa11.66□□□□□ -0.54
LINC00404-201ENST00000418660 VPS13DQ5THJ4 4388 aa11.65□□□□□ -0.54
LINC00404-201ENST00000418660 PTTG1O95997 202 aa11.65□□□□□ -0.54
LINC00404-201ENST00000418660 IFNA5P01569 189 aa11.65□□□□□ -0.54
LINC00404-201ENST00000418660 DEFB130BP0DP73 79 aa11.65□□□□□ -0.54
LINC00404-201ENST00000418660 DEFB130AP0DP74 79 aa11.65□□□□□ -0.54
LINC00404-201ENST00000418660 FCN2Q15485 313 aa11.65□□□□□ -0.54
LINC00404-201ENST00000418660 EXOC3-AS1Q8N2X6 119 aa11.65□□□□□ -0.54
LINC00404-201ENST00000418660 SCGB1C1Q8TD33 95 aa11.65□□□□□ -0.54
LINC00404-201ENST00000418660 RNASE8Q8TDE3 154 aaKnown RBP11.65□□□□□ -0.54
LINC00404-201ENST00000418660 TMEM263Q8WUH6 116 aaKnown RBP11.65□□□□□ -0.54
LINC00404-201ENST00000418660 LINC00477Q96M19 166 aa11.65□□□□□ -0.54
LINC00404-201ENST00000418660 PAXXQ9BUH6 204 aa11.65□□□□□ -0.54
LINC00404-201ENST00000418660 SMIM3Q9BZL3 60 aa11.65□□□□□ -0.54
LINC00404-201ENST00000418660 TIMM8BQ9Y5J9 83 aaPredicted RBP11.65□□□□□ -0.54
LINC00404-201ENST00000418660 ICAM4Q14773 271 aa11.64□□□□□ -0.55
LINC00404-201ENST00000418660 FFAR4Q5NUL3 377 aa11.64□□□□□ -0.55
LINC00404-201ENST00000418660 TMEM88Q6PEY1 159 aa11.64□□□□□ -0.55
LINC00404-201ENST00000418660 CCDC28AQ8IWP9 274 aa11.64□□□□□ -0.55
LINC00404-201ENST00000418660 RNF141Q8WVD5 230 aa11.64□□□□□ -0.55
LINC00404-201ENST00000418660 KMT2AQ03164 3969 aa11.64□□□□□ -0.55
LINC00404-201ENST00000418660 TRAV12-3A0A0B4J271 114 aa11.63□□□□□ -0.55
LINC00404-201ENST00000418660 CBY3A6NI87 242 aa11.63□□□□□ -0.55
LINC00404-201ENST00000418660 J3KRW8 73 aa11.63□□□□□ -0.55
LINC00404-201ENST00000418660 SLC25A5P05141 298 aaKnown RBP11.63□□□□□ -0.55
LINC00404-201ENST00000418660 ERCC8Q13216 396 aa11.63□□□□□ -0.55
LINC00404-201ENST00000418660 FXYD5Q96DB9 178 aa11.63□□□□□ -0.55
LINC00404-201ENST00000418660 AGPAT4-IT1Q9H0P7 198 aa11.63□□□□□ -0.55
LINC00404-201ENST00000418660 OR10J4P0C629 311 aa11.62□□□□□ -0.55
LINC00404-201ENST00000418660 C9orf47Q6ZRZ4 202 aa11.62□□□□□ -0.55
LINC00404-201ENST00000418660 FAM19A4Q96LR4 140 aa11.62□□□□□ -0.55
LINC00404-201ENST00000418660 PYGO2Q9BRQ0 406 aa11.62□□□□□ -0.55
LINC00404-201ENST00000418660 WFDC1Q9HC57 220 aa11.62□□□□□ -0.55
LINC00404-201ENST00000418660 NOP10Q9NPE3 64 aaKnown RBP11.62□□□□□ -0.55
LINC00404-201ENST00000418660 OR7C2O60412 319 aa11.61□□□□□ -0.55
LINC00404-201ENST00000418660 ATP5G1P05496 136 aa11.61□□□□□ -0.55
LINC00404-201ENST00000418660 ATP5G3P48201 142 aa11.61□□□□□ -0.55
LINC00404-201ENST00000418660 FAM122CQ6P4D5 195 aa11.61□□□□□ -0.55
LINC00404-201ENST00000418660 C15orf53Q8NAA6 179 aa11.61□□□□□ -0.55
LINC00404-201ENST00000418660 ZNF503Q96F45 646 aa11.61□□□□□ -0.55
LINC00404-201ENST00000418660 MED28Q9H204 178 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms