RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 SIGLEC15Q6ZMC9 328 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 RBPMS2Q6ZRY4 209 aaKnown RBP9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 Q6ZWC4 215 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 MAPKAPK5-AS1Q8N8E1 139 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 GLMPQ8WWB7 406 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 FAM167A-AS1Q96KT0 104 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 SLC25A2Q9BXI2 301 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 HRH4Q9H3N8 390 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 PKD1P98161 4303 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 RGS13O14921 159 aa9.97□□□□□ -0.81
RAPGEF1-204ENST00000414781 HMGB3O15347 200 aaKnown RBP9.97□□□□□ -0.81
RAPGEF1-204ENST00000414781 SPRY2O43597 315 aa9.97□□□□□ -0.81
RAPGEF1-204ENST00000414781 CDK2AP2O75956 126 aa9.97□□□□□ -0.81
RAPGEF1-204ENST00000414781 NBEAP1P0C6P0 100 aa9.97□□□□□ -0.81
RAPGEF1-204ENST00000414781 ARL14EPLP0DKL9 152 aa9.97□□□□□ -0.81
RAPGEF1-204ENST00000414781 UBE2L3P68036 154 aaKnown RBP9.97□□□□□ -0.81
RAPGEF1-204ENST00000414781 DEFB114Q30KQ6 69 aa9.97□□□□□ -0.81
RAPGEF1-204ENST00000414781 CD300EQ496F6 205 aaPredicted RBP9.97□□□□□ -0.81
RAPGEF1-204ENST00000414781 MORN5Q5VZ52 161 aa9.97□□□□□ -0.81
RAPGEF1-204ENST00000414781 TCF24Q7RTU0 167 aa9.97□□□□□ -0.81
RAPGEF1-204ENST00000414781 IQCF2Q8IXL9 164 aa9.97□□□□□ -0.81
RAPGEF1-204ENST00000414781 CLEC5AQ9NY25 188 aa9.97□□□□□ -0.81
RAPGEF1-204ENST00000414781 GCHFRP30047 84 aa9.96□□□□□ -0.82
RAPGEF1-204ENST00000414781 TAGLN2P37802 199 aaKnown RBP9.96□□□□□ -0.82
RAPGEF1-204ENST00000414781 PDE6HQ13956 83 aa9.96□□□□□ -0.82
RAPGEF1-204ENST00000414781 NKX6-2Q9C056 277 aaPredicted RBP9.96□□□□□ -0.82
RAPGEF1-204ENST00000414781 A0A087X0K7 114 aa9.95□□□□□ -0.82
RAPGEF1-204ENST00000414781 TRAV2A0A0B4J234 112 aa9.95□□□□□ -0.82
RAPGEF1-204ENST00000414781 DNASE2O00115 360 aaPredicted RBP9.95□□□□□ -0.82
RAPGEF1-204ENST00000414781 ZNF253O75346 499 aa9.95□□□□□ -0.82
RAPGEF1-204ENST00000414781 IFNA1P01562 189 aa9.95□□□□□ -0.82
RAPGEF1-204ENST00000414781 NMBP08949 121 aa9.95□□□□□ -0.82
RAPGEF1-204ENST00000414781 IGLC2P0DOY2 106 aa9.95□□□□□ -0.82
RAPGEF1-204ENST00000414781 PSG9Q00887 426 aa9.95□□□□□ -0.82
RAPGEF1-204ENST00000414781 GUCA2BQ16661 112 aa9.95□□□□□ -0.82
RAPGEF1-204ENST00000414781 CLLU1Q5K131 121 aa9.95□□□□□ -0.82
RAPGEF1-204ENST00000414781 FAM90A2PQ658T7 463 aa9.95□□□□□ -0.82
RAPGEF1-204ENST00000414781 LYPD1Q8N2G4 141 aa9.95□□□□□ -0.82
RAPGEF1-204ENST00000414781 LYPD6BQ8NI32 183 aa9.95□□□□□ -0.82
RAPGEF1-204ENST00000414781 C2CD4CQ8TF44 421 aa9.95□□□□□ -0.82
RAPGEF1-204ENST00000414781 FXYD5Q96DB9 178 aa9.95□□□□□ -0.82
RAPGEF1-204ENST00000414781 NRN1Q9NPD7 142 aa9.95□□□□□ -0.82
RAPGEF1-204ENST00000414781 MLXQ9UH92 298 aa9.95□□□□□ -0.82
RAPGEF1-204ENST00000414781 TRBV19A0A075B6N1 114 aa9.94□□□□□ -0.82
RAPGEF1-204ENST00000414781 TSPAN4O14817 238 aa9.94□□□□□ -0.82
RAPGEF1-204ENST00000414781 MRPS12O15235 138 aaKnown RBP9.94□□□□□ -0.82
RAPGEF1-204ENST00000414781 OR10J4P0C629 311 aa9.94□□□□□ -0.82
RAPGEF1-204ENST00000414781 PYYP10082 97 aa9.94□□□□□ -0.82
RAPGEF1-204ENST00000414781 ID1P41134 155 aa9.94□□□□□ -0.82
RAPGEF1-204ENST00000414781 APOC4P55056 127 aa9.94□□□□□ -0.82
RAPGEF1-204ENST00000414781 FGF8P55075 233 aaPredicted RBP9.94□□□□□ -0.82
RAPGEF1-204ENST00000414781 CMC4P56277 68 aaPredicted RBP9.94□□□□□ -0.82
RAPGEF1-204ENST00000414781 SSX7Q7RTT5 188 aa9.94□□□□□ -0.82
RAPGEF1-204ENST00000414781 ZNF575Q86XF7 245 aa9.94□□□□□ -0.82
RAPGEF1-204ENST00000414781 SUN5Q8TC36 379 aa9.94□□□□□ -0.82
RAPGEF1-204ENST00000414781 SPAG8Q99932 426 aaPredicted RBP9.94□□□□□ -0.82
RAPGEF1-204ENST00000414781 SLC50A1Q9BRV3 221 aa9.94□□□□□ -0.82
RAPGEF1-204ENST00000414781 MANBALQ9NQG1 85 aa9.94□□□□□ -0.82
RAPGEF1-204ENST00000414781 ARL2-SNX15V9GYD0 113 aa9.94□□□□□ -0.82
RAPGEF1-204ENST00000414781 A0A1W2PRE2 83 aa9.93□□□□□ -0.82
RAPGEF1-204ENST00000414781 UBE2CO00762 179 aa9.93□□□□□ -0.82
RAPGEF1-204ENST00000414781 RTL8CO15255 209 aa9.93□□□□□ -0.82
RAPGEF1-204ENST00000414781 BLNKQ8WV28 456 aa9.93□□□□□ -0.82
RAPGEF1-204ENST00000414781 ZNF503Q96F45 646 aa9.93□□□□□ -0.82
RAPGEF1-204ENST00000414781 TXNDC17Q9BRA2 123 aa9.93□□□□□ -0.82
RAPGEF1-204ENST00000414781 AAMDCQ9H7C9 122 aa9.93□□□□□ -0.82
RAPGEF1-204ENST00000414781 ZNF586Q9NXT0 402 aa9.93□□□□□ -0.82
RAPGEF1-204ENST00000414781 A0A1B0GV50 99 aa9.92□□□□□ -0.82
RAPGEF1-204ENST00000414781 OR4C46A6NHA9 309 aa9.92□□□□□ -0.82
RAPGEF1-204ENST00000414781 H3BQ15 152 aa9.92□□□□□ -0.82
RAPGEF1-204ENST00000414781 ISLRO14498 428 aa9.92□□□□□ -0.82
RAPGEF1-204ENST00000414781 EIF3GO75821 320 aaKnown RBP eCLIP9.92□□□□□ -0.82
RAPGEF1-204ENST00000414781 EDN2P20800 178 aa9.92□□□□□ -0.82
RAPGEF1-204ENST00000414781 SNRPD3P62318 126 aaKnown RBP9.92□□□□□ -0.82
RAPGEF1-204ENST00000414781 Q8N1X5 172 aa9.92□□□□□ -0.82
RAPGEF1-204ENST00000414781 C16orf92Q96LL3 132 aa9.92□□□□□ -0.82
RAPGEF1-204ENST00000414781 MS4A6AQ9H2W1 248 aa9.92□□□□□ -0.82
RAPGEF1-204ENST00000414781 PRELID1Q9Y255 219 aa9.92□□□□□ -0.82
RAPGEF1-204ENST00000414781 RANP62826 216 aaKnown RBP9.91□□□□□ -0.82
RAPGEF1-204ENST00000414781 DEFB135Q30KP9 77 aa9.91□□□□□ -0.82
RAPGEF1-204ENST00000414781 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.91□□□□□ -0.82
RAPGEF1-204ENST00000414781 TMEM61Q8N0U2 210 aa9.91□□□□□ -0.82
RAPGEF1-204ENST00000414781 ARL6IP6Q8N6S5 226 aa9.91□□□□□ -0.82
RAPGEF1-204ENST00000414781 RXFP4Q8TDU9 374 aa9.91□□□□□ -0.82
RAPGEF1-204ENST00000414781 TMPRSS5Q9H3S3 457 aa9.91□□□□□ -0.82
RAPGEF1-204ENST00000414781 GNG13Q9P2W3 67 aa9.91□□□□□ -0.82
RAPGEF1-204ENST00000414781 IGKV3-7A0A075B6H7 116 aa9.9□□□□□ -0.82
RAPGEF1-204ENST00000414781 CSN1S1P47710 185 aa9.9□□□□□ -0.82
RAPGEF1-204ENST00000414781 CCL20P78556 96 aa9.9□□□□□ -0.82
RAPGEF1-204ENST00000414781 CST9LP1Q5W188 147 aa9.9□□□□□ -0.82
RAPGEF1-204ENST00000414781 GBGT1Q8N5D6 347 aa9.9□□□□□ -0.82
RAPGEF1-204ENST00000414781 TCEAL7Q9BRU2 100 aa9.9□□□□□ -0.82
RAPGEF1-204ENST00000414781 ZNF331Q9NQX6 463 aaPredicted RBP9.9□□□□□ -0.82
RAPGEF1-204ENST00000414781 OTORQ9NRC9 128 aa9.9□□□□□ -0.82
RAPGEF1-204ENST00000414781 APLNQ9ULZ1 77 aa9.9□□□□□ -0.82
RAPGEF1-204ENST00000414781 RBFOX3A6NFN3 312 aa9.89□□□□□ -0.83
RAPGEF1-204ENST00000414781 F6UZH7 168 aa9.89□□□□□ -0.83
RAPGEF1-204ENST00000414781 K7EQG2 157 aa9.89□□□□□ -0.83
RAPGEF1-204ENST00000414781 PAGE4O60829 102 aa9.89□□□□□ -0.83
RAPGEF1-204ENST00000414781 C11orf45Q8TAV5 145 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms